RNA–Protein interactions for RNA: ENST00000427419.5

SLC40A1-204, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 299 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-204ENST00000427419 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
SLC40A1-204ENST00000427419 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
SLC40A1-204ENST00000427419 ABCC9O60706 1549 aa21.76■■□□□ 1.07
SLC40A1-204ENST00000427419 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
SLC40A1-204ENST00000427419 NACADO15069 1562 aa20.89■□□□□ 0.93
SLC40A1-204ENST00000427419 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
SLC40A1-204ENST00000427419 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
SLC40A1-204ENST00000427419 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
SLC40A1-204ENST00000427419 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
SLC40A1-204ENST00000427419 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
SLC40A1-204ENST00000427419 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
SLC40A1-204ENST00000427419 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
SLC40A1-204ENST00000427419 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
SLC40A1-204ENST00000427419 SCRIBQ14160 1630 aa20.1■□□□□ 0.81
SLC40A1-204ENST00000427419 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
SLC40A1-204ENST00000427419 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
SLC40A1-204ENST00000427419 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
SLC40A1-204ENST00000427419 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
SLC40A1-204ENST00000427419 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
SLC40A1-204ENST00000427419 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
SLC40A1-204ENST00000427419 BAZ1AQ9NRL2 1556 aaPredicted RBP19.23■□□□□ 0.67
SLC40A1-204ENST00000427419 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
SLC40A1-204ENST00000427419 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
SLC40A1-204ENST00000427419 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
SLC40A1-204ENST00000427419 PEG3Q9GZU2 1588 aa19.1■□□□□ 0.65
SLC40A1-204ENST00000427419 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
SLC40A1-204ENST00000427419 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.63
SLC40A1-204ENST00000427419 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
SLC40A1-204ENST00000427419 WIZO95785 1651 aa18.8■□□□□ 0.6
SLC40A1-204ENST00000427419 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
SLC40A1-204ENST00000427419 CUX2O14529 1486 aa18.77■□□□□ 0.59
SLC40A1-204ENST00000427419 NESP48681 1621 aa18.74■□□□□ 0.59
SLC40A1-204ENST00000427419 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
SLC40A1-204ENST00000427419 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
SLC40A1-204ENST00000427419 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
SLC40A1-204ENST00000427419 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
SLC40A1-204ENST00000427419 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
SLC40A1-204ENST00000427419 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
SLC40A1-204ENST00000427419 CFTRP13569 1480 aa18.51■□□□□ 0.55
SLC40A1-204ENST00000427419 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
SLC40A1-204ENST00000427419 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.54
SLC40A1-204ENST00000427419 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
SLC40A1-204ENST00000427419 WDR62O43379 1518 aa18.42■□□□□ 0.54
SLC40A1-204ENST00000427419 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
SLC40A1-204ENST00000427419 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
SLC40A1-204ENST00000427419 DNAJC5Q9H3Z4 198 aa18.37■□□□□ 0.53
SLC40A1-204ENST00000427419 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
SLC40A1-204ENST00000427419 ABCC8Q09428 1581 aa18.2■□□□□ 0.5
SLC40A1-204ENST00000427419 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
SLC40A1-204ENST00000427419 DNMBPQ6XZF7 1577 aa18.1■□□□□ 0.49
SLC40A1-204ENST00000427419 IFT140Q96RY7 1462 aa18.09■□□□□ 0.49
SLC40A1-204ENST00000427419 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
SLC40A1-204ENST00000427419 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
SLC40A1-204ENST00000427419 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
SLC40A1-204ENST00000427419 TARBP1Q13395 1621 aaKnown RBP17.92■□□□□ 0.46
SLC40A1-204ENST00000427419 OSCARQ8IYS5 282 aa17.92■□□□□ 0.46
SLC40A1-204ENST00000427419 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
SLC40A1-204ENST00000427419 WDR97A6NE52 1622 aa17.89■□□□□ 0.45
SLC40A1-204ENST00000427419 SOGA1O94964 1423 aa17.87■□□□□ 0.45
SLC40A1-204ENST00000427419 FGD5Q6ZNL6 1462 aa17.86■□□□□ 0.45
SLC40A1-204ENST00000427419 CUX1P39880 1505 aa17.86■□□□□ 0.45
SLC40A1-204ENST00000427419 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.442e-6■■■□□ 18.3
SLC40A1-204ENST00000427419 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
SLC40A1-204ENST00000427419 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
SLC40A1-204ENST00000427419 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
SLC40A1-204ENST00000427419 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
SLC40A1-204ENST00000427419 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.43
SLC40A1-204ENST00000427419 CHD1O14646 1710 aa17.71■□□□□ 0.43
SLC40A1-204ENST00000427419 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
SLC40A1-204ENST00000427419 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.43
SLC40A1-204ENST00000427419 TOP2BQ02880 1626 aa17.7■□□□□ 0.42
SLC40A1-204ENST00000427419 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
SLC40A1-204ENST00000427419 GAPVD1Q14C86 1478 aa17.67■□□□□ 0.42
SLC40A1-204ENST00000427419 FBLN2P98095 1184 aa17.65■□□□□ 0.42
SLC40A1-204ENST00000427419 ABCA5Q8WWZ7 1642 aa17.65■□□□□ 0.42
SLC40A1-204ENST00000427419 PBRM1Q86U86 1689 aa17.64■□□□□ 0.42
SLC40A1-204ENST00000427419 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
SLC40A1-204ENST00000427419 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
SLC40A1-204ENST00000427419 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
SLC40A1-204ENST00000427419 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
SLC40A1-204ENST00000427419 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
SLC40A1-204ENST00000427419 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
SLC40A1-204ENST00000427419 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
SLC40A1-204ENST00000427419 ARHGEF11O15085 1522 aa17.6■□□□□ 0.41
SLC40A1-204ENST00000427419 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
SLC40A1-204ENST00000427419 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.39
SLC40A1-204ENST00000427419 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
SLC40A1-204ENST00000427419 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
SLC40A1-204ENST00000427419 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
SLC40A1-204ENST00000427419 CYB5RLQ6IPT4 315 aa17.42■□□□□ 0.38
SLC40A1-204ENST00000427419 ARAP1Q96P48 1450 aa17.42■□□□□ 0.38
SLC40A1-204ENST00000427419 NUP160Q12769 1436 aa17.4■□□□□ 0.38
SLC40A1-204ENST00000427419 KIF27Q86VH2 1401 aa17.39■□□□□ 0.38
SLC40A1-204ENST00000427419 CEP170Q5SW79 1584 aa17.36■□□□□ 0.37
SLC40A1-204ENST00000427419 CUL7Q14999 1698 aa17.33■□□□□ 0.37
SLC40A1-204ENST00000427419 SHROOM2Q13796 1616 aa17.3■□□□□ 0.36
SLC40A1-204ENST00000427419 IGF1RP08069 1367 aa17.28■□□□□ 0.36
SLC40A1-204ENST00000427419 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
SLC40A1-204ENST00000427419 JPH4Q96JJ6 628 aa17.21■□□□□ 0.35
SLC40A1-204ENST00000427419 CARMIL1Q5VZK9 1371 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms