RNA–Protein interactions for RNA: ENST00000427321.1

C1orf228-206, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 2

Gene C1orf228, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-206ENST00000427321 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
C1orf228-206ENST00000427321 ABCC9O60706 1549 aa28.9■■■□□ 2.22
C1orf228-206ENST00000427321 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
C1orf228-206ENST00000427321 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.98
C1orf228-206ENST00000427321 DNAJC5BQ9UF47 199 aa27.17■■□□□ 1.94
C1orf228-206ENST00000427321 NACADO15069 1562 aa27.09■■□□□ 1.93
C1orf228-206ENST00000427321 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
C1orf228-206ENST00000427321 DCAF8L2P0C7V8 631 aa26.86■■□□□ 1.89
C1orf228-206ENST00000427321 PABPN1Q86U42 306 aaKnown RBP eCLIP26.79■■□□□ 1.88
C1orf228-206ENST00000427321 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
C1orf228-206ENST00000427321 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
C1orf228-206ENST00000427321 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
C1orf228-206ENST00000427321 SCRIBQ14160 1630 aa26.2■■□□□ 1.78
C1orf228-206ENST00000427321 DCAF1Q9Y4B6 1507 aa26.18■■□□□ 1.78
C1orf228-206ENST00000427321 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
C1orf228-206ENST00000427321 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
C1orf228-206ENST00000427321 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
C1orf228-206ENST00000427321 EIF4G1Q04637 1599 aaKnown RBP25.98■■□□□ 1.75
C1orf228-206ENST00000427321 DNAJC5Q9H3Z4 198 aa25.07■■□□□ 1.6
C1orf228-206ENST00000427321 ERCC6Q03468 1493 aa24.97■■□□□ 1.59
C1orf228-206ENST00000427321 CUX2O14529 1486 aa24.96■■□□□ 1.59
C1orf228-206ENST00000427321 NCAPD3P42695 1498 aa24.95■■□□□ 1.58
C1orf228-206ENST00000427321 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
C1orf228-206ENST00000427321 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.58
C1orf228-206ENST00000427321 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
C1orf228-206ENST00000427321 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
C1orf228-206ENST00000427321 NESP48681 1621 aa24.76■■□□□ 1.55
C1orf228-206ENST00000427321 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
C1orf228-206ENST00000427321 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.54
C1orf228-206ENST00000427321 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
C1orf228-206ENST00000427321 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
C1orf228-206ENST00000427321 KIF21AQ7Z4S6 1674 aa24.54■■□□□ 1.52
C1orf228-206ENST00000427321 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
C1orf228-206ENST00000427321 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
C1orf228-206ENST00000427321 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
C1orf228-206ENST00000427321 WIZO95785 1651 aa24.27■■□□□ 1.48
C1orf228-206ENST00000427321 MRC2Q9UBG0 1479 aa24.2■■□□□ 1.47
C1orf228-206ENST00000427321 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
C1orf228-206ENST00000427321 WDR62O43379 1518 aa24.16■■□□□ 1.46
C1orf228-206ENST00000427321 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
C1orf228-206ENST00000427321 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
C1orf228-206ENST00000427321 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
C1orf228-206ENST00000427321 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
C1orf228-206ENST00000427321 CFTRP13569 1480 aa23.88■■□□□ 1.41
C1orf228-206ENST00000427321 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
C1orf228-206ENST00000427321 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
C1orf228-206ENST00000427321 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
C1orf228-206ENST00000427321 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
C1orf228-206ENST00000427321 RIMBP3CA6NJZ7 1639 aa23.59■■□□□ 1.37
C1orf228-206ENST00000427321 RIMBP3BA6NNM3 1639 aa23.59■■□□□ 1.37
C1orf228-206ENST00000427321 RIMBP3Q9UFD9 1639 aa23.59■■□□□ 1.37
C1orf228-206ENST00000427321 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.36
C1orf228-206ENST00000427321 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
C1orf228-206ENST00000427321 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
C1orf228-206ENST00000427321 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
C1orf228-206ENST00000427321 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
C1orf228-206ENST00000427321 DNMBPQ6XZF7 1577 aa23.45■■□□□ 1.34
C1orf228-206ENST00000427321 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
C1orf228-206ENST00000427321 CHD1O14646 1710 aa23.44■■□□□ 1.34
C1orf228-206ENST00000427321 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
C1orf228-206ENST00000427321 TARBP1Q13395 1621 aaKnown RBP23.35■■□□□ 1.33
C1orf228-206ENST00000427321 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.32
C1orf228-206ENST00000427321 POLA1P09884 1462 aaPredicted RBP23.27■■□□□ 1.32
C1orf228-206ENST00000427321 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
C1orf228-206ENST00000427321 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
C1orf228-206ENST00000427321 FBLN2P98095 1184 aa23.17■■□□□ 1.3
C1orf228-206ENST00000427321 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
C1orf228-206ENST00000427321 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
C1orf228-206ENST00000427321 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
C1orf228-206ENST00000427321 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
C1orf228-206ENST00000427321 SOGA1O94964 1423 aa23.08■■□□□ 1.29
C1orf228-206ENST00000427321 WDR97A6NE52 1622 aa23.08■■□□□ 1.29
C1orf228-206ENST00000427321 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
C1orf228-206ENST00000427321 CUX1P39880 1505 aa23.05■■□□□ 1.28
C1orf228-206ENST00000427321 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
C1orf228-206ENST00000427321 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
C1orf228-206ENST00000427321 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
C1orf228-206ENST00000427321 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
C1orf228-206ENST00000427321 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
C1orf228-206ENST00000427321 CHMP7Q8WUX9 453 aaPredicted RBP22.92■■□□□ 1.26
C1orf228-206ENST00000427321 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
C1orf228-206ENST00000427321 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
C1orf228-206ENST00000427321 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
C1orf228-206ENST00000427321 ABCA10Q8WWZ4 1543 aa22.78■■□□□ 1.24
C1orf228-206ENST00000427321 ADAMTS12P58397 1594 aa22.74■■□□□ 1.23
C1orf228-206ENST00000427321 ERCC6L2Q5T890 1561 aa22.71■■□□□ 1.23
C1orf228-206ENST00000427321 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
C1orf228-206ENST00000427321 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
C1orf228-206ENST00000427321 BIVM-ERCC5R4GMW8 1640 aa22.67■■□□□ 1.22
C1orf228-206ENST00000427321 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
C1orf228-206ENST00000427321 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
C1orf228-206ENST00000427321 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
C1orf228-206ENST00000427321 NUP160Q12769 1436 aa22.58■■□□□ 1.21
C1orf228-206ENST00000427321 SHROOM2Q13796 1616 aa22.58■■□□□ 1.21
C1orf228-206ENST00000427321 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
C1orf228-206ENST00000427321 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
C1orf228-206ENST00000427321 ERICH3Q5RHP9 1530 aa22.51■■□□□ 1.19
C1orf228-206ENST00000427321 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
C1orf228-206ENST00000427321 RUSC2Q8N2Y8 1516 aa22.42■■□□□ 1.18
C1orf228-206ENST00000427321 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms