RNA–Protein interactions for RNA: ENST00000427312.1

MRPS18A-203, Transcript of mitochondrial ribosomal protein S18A, humanhuman

TSL 1 (best)

Gene MRPS18A, Length 803 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18A-203ENST00000427312 NISCHQ9Y2I1 1504 aa41.14■■■■■ 4.18
MRPS18A-203ENST00000427312 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
MRPS18A-203ENST00000427312 ABCC9O60706 1549 aa36.22■■■■□ 3.39
MRPS18A-203ENST00000427312 RB1CC1Q8TDY2 1594 aa34.64■■■■□ 3.14
MRPS18A-203ENST00000427312 NACADO15069 1562 aa34.54■■■■□ 3.12
MRPS18A-203ENST00000427312 DCAF8L2P0C7V8 631 aa34.46■■■■□ 3.11
MRPS18A-203ENST00000427312 MYO15BQ96JP2 1530 aa34.23■■■■□ 3.07
MRPS18A-203ENST00000427312 ZCCHC6Q5VYS8 1495 aaKnown RBP34.2■■■■□ 3.07
MRPS18A-203ENST00000427312 UNC13AQ9UPW8 1703 aa34.01■■■■□ 3.03
MRPS18A-203ENST00000427312 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
MRPS18A-203ENST00000427312 PABPN1Q86U42 306 aaKnown RBP eCLIP33.82■■■■□ 3
MRPS18A-203ENST00000427312 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
MRPS18A-203ENST00000427312 DNAJC5BQ9UF47 199 aa33.62■■■□□ 2.97
MRPS18A-203ENST00000427312 SCRIBQ14160 1630 aa33.48■■■□□ 2.95
MRPS18A-203ENST00000427312 SHROOM4Q9ULL8 1493 aa33.18■■■□□ 2.9
MRPS18A-203ENST00000427312 EIF4G1Q04637 1599 aaKnown RBP32.8■■■□□ 2.84
MRPS18A-203ENST00000427312 CC2D2AQ9P2K1 1620 aa32.77■■■□□ 2.84
MRPS18A-203ENST00000427312 CECR2Q9BXF3 1484 aa32.55■■■□□ 2.8
MRPS18A-203ENST00000427312 SMARCA4P51532 1647 aa32■■■□□ 2.71
MRPS18A-203ENST00000427312 NCAPD3P42695 1498 aa31.91■■■□□ 2.7
MRPS18A-203ENST00000427312 ATAD2BQ9ULI0 1458 aa31.9■■■□□ 2.7
MRPS18A-203ENST00000427312 BAZ1AQ9NRL2 1556 aaPredicted RBP31.86■■■□□ 2.69
MRPS18A-203ENST00000427312 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
MRPS18A-203ENST00000427312 MROH2BQ7Z745 1585 aa31.74■■■□□ 2.67
MRPS18A-203ENST00000427312 HMGXB3Q12766 1538 aa31.7■■■□□ 2.66
MRPS18A-203ENST00000427312 PEG3Q9GZU2 1588 aa31.68■■■□□ 2.66
MRPS18A-203ENST00000427312 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
MRPS18A-203ENST00000427312 WIZO95785 1651 aa31.41■■■□□ 2.62
MRPS18A-203ENST00000427312 NESP48681 1621 aa31.3■■■□□ 2.6
MRPS18A-203ENST00000427312 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
MRPS18A-203ENST00000427312 ERCC6Q03468 1493 aa31.16■■■□□ 2.58
MRPS18A-203ENST00000427312 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
MRPS18A-203ENST00000427312 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
MRPS18A-203ENST00000427312 CUX2O14529 1486 aa30.95■■■□□ 2.55
MRPS18A-203ENST00000427312 CADPSQ9ULU8 1353 aa30.95■■■□□ 2.55
MRPS18A-203ENST00000427312 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
MRPS18A-203ENST00000427312 THOC2Q8NI27 1593 aaKnown RBP30.87■■■□□ 2.53
MRPS18A-203ENST00000427312 PDS5BQ9NTI5 1447 aa30.85■■■□□ 2.53
MRPS18A-203ENST00000427312 CFTRP13569 1480 aa30.72■■■□□ 2.51
MRPS18A-203ENST00000427312 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
MRPS18A-203ENST00000427312 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
MRPS18A-203ENST00000427312 MRC2Q9UBG0 1479 aa30.59■■■□□ 2.49
MRPS18A-203ENST00000427312 CEP164Q9UPV0 1460 aa30.56■■■□□ 2.48
MRPS18A-203ENST00000427312 WDR62O43379 1518 aa30.53■■■□□ 2.48
MRPS18A-203ENST00000427312 PRDM2Q13029 1718 aa30.48■■■□□ 2.47
MRPS18A-203ENST00000427312 DNAJC5Q9H3Z4 198 aa30.41■■■□□ 2.46
MRPS18A-203ENST00000427312 URB2Q14146 1524 aaKnown RBP30.36■■■□□ 2.45
MRPS18A-203ENST00000427312 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
MRPS18A-203ENST00000427312 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
MRPS18A-203ENST00000427312 DNMBPQ6XZF7 1577 aa30.01■■■□□ 2.39
MRPS18A-203ENST00000427312 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
MRPS18A-203ENST00000427312 IFT140Q96RY7 1462 aa29.93■■■□□ 2.38
MRPS18A-203ENST00000427312 ZNF608Q9ULD9 1512 aaPredicted RBP29.91■■■□□ 2.38
MRPS18A-203ENST00000427312 POLA1P09884 1462 aaPredicted RBP29.82■■■□□ 2.36
MRPS18A-203ENST00000427312 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
MRPS18A-203ENST00000427312 CUX1P39880 1505 aa29.78■■■□□ 2.36
MRPS18A-203ENST00000427312 EIF4G3O43432 1585 aaKnown RBP29.74■■■□□ 2.35
MRPS18A-203ENST00000427312 RAD54L2Q9Y4B4 1467 aa29.73■■■□□ 2.35
MRPS18A-203ENST00000427312 FGD5Q6ZNL6 1462 aa29.7■■■□□ 2.35
MRPS18A-203ENST00000427312 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.343e-7■■■■■ 38.8
MRPS18A-203ENST00000427312 SOGA1O94964 1423 aa29.67■■■□□ 2.34
MRPS18A-203ENST00000427312 OSCARQ8IYS5 282 aa29.63■■■□□ 2.33
MRPS18A-203ENST00000427312 TDRD9Q8NDG6 1382 aaKnown RBP29.57■■■□□ 2.32
MRPS18A-203ENST00000427312 WDR97A6NE52 1622 aa29.51■■■□□ 2.31
MRPS18A-203ENST00000427312 CHD1O14646 1710 aa29.45■■■□□ 2.31
MRPS18A-203ENST00000427312 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
MRPS18A-203ENST00000427312 BIVM-ERCC5R4GMW8 1640 aa29.43■■■□□ 2.3
MRPS18A-203ENST00000427312 WRNQ14191 1432 aaPredicted RBP eCLIP29.42■■■□□ 2.3
MRPS18A-203ENST00000427312 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
MRPS18A-203ENST00000427312 ABCA10Q8WWZ4 1543 aa29.38■■■□□ 2.29
MRPS18A-203ENST00000427312 SNAPC4Q5SXM2 1469 aa29.37■■■□□ 2.29
MRPS18A-203ENST00000427312 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
MRPS18A-203ENST00000427312 ABCA5Q8WWZ7 1642 aa29.32■■■□□ 2.28
MRPS18A-203ENST00000427312 FBLN2P98095 1184 aa29.32■■■□□ 2.28
MRPS18A-203ENST00000427312 PBRM1Q86U86 1689 aa29.31■■■□□ 2.28
MRPS18A-203ENST00000427312 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
MRPS18A-203ENST00000427312 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
MRPS18A-203ENST00000427312 TRIM41Q8WV44 630 aa29.26■■■□□ 2.27
MRPS18A-203ENST00000427312 RIMBP3CA6NJZ7 1639 aa29.25■■■□□ 2.27
MRPS18A-203ENST00000427312 RIMBP3BA6NNM3 1639 aa29.25■■■□□ 2.27
MRPS18A-203ENST00000427312 RIMBP3Q9UFD9 1639 aa29.25■■■□□ 2.27
MRPS18A-203ENST00000427312 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
MRPS18A-203ENST00000427312 ARHGEF11O15085 1522 aa29.19■■■□□ 2.26
MRPS18A-203ENST00000427312 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
MRPS18A-203ENST00000427312 CLASP1Q7Z460 1538 aa29.11■■■□□ 2.25
MRPS18A-203ENST00000427312 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
MRPS18A-203ENST00000427312 ERICH3Q5RHP9 1530 aa29■■■□□ 2.23
MRPS18A-203ENST00000427312 GRIN2AQ12879 1464 aa28.97■■■□□ 2.23
MRPS18A-203ENST00000427312 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
MRPS18A-203ENST00000427312 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
MRPS18A-203ENST00000427312 CYB5RLQ6IPT4 315 aa28.93■■■□□ 2.22
MRPS18A-203ENST00000427312 CEP170Q5SW79 1584 aa28.9■■■□□ 2.22
MRPS18A-203ENST00000427312 NUP160Q12769 1436 aa28.88■■■□□ 2.21
MRPS18A-203ENST00000427312 KIF27Q86VH2 1401 aa28.79■■■□□ 2.2
MRPS18A-203ENST00000427312 IGF1RP08069 1367 aa28.79■■■□□ 2.2
MRPS18A-203ENST00000427312 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
MRPS18A-203ENST00000427312 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
MRPS18A-203ENST00000427312 CUL7Q14999 1698 aa28.68■■■□□ 2.18
MRPS18A-203ENST00000427312 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.17
MRPS18A-203ENST00000427312 CARMIL1Q5VZK9 1371 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms