RNA–Protein interactions for RNA: ENST00000427099.1

TRO-209, Transcript of trophinin, humanhuman

TSL 3

Gene TRO, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-209ENST00000427099 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
TRO-209ENST00000427099 CCDC180Q9P1Z9 1646 aa31.16■■■□□ 2.58
TRO-209ENST00000427099 ABCC9O60706 1549 aa31.1■■■□□ 2.57
TRO-209ENST00000427099 RB1CC1Q8TDY2 1594 aa29.63■■■□□ 2.33
TRO-209ENST00000427099 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
TRO-209ENST00000427099 NACADO15069 1562 aa29.45■■■□□ 2.31
TRO-209ENST00000427099 MYO15BQ96JP2 1530 aa29.04■■■□□ 2.24
TRO-209ENST00000427099 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.24
TRO-209ENST00000427099 DNAJC5BQ9UF47 199 aa29.02■■■□□ 2.24
TRO-209ENST00000427099 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
TRO-209ENST00000427099 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
TRO-209ENST00000427099 DCAF1Q9Y4B6 1507 aa28.76■■■□□ 2.19
TRO-209ENST00000427099 BICRAQ9NZM4 1560 aa28.73■■■□□ 2.19
TRO-209ENST00000427099 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
TRO-209ENST00000427099 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
TRO-209ENST00000427099 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
TRO-209ENST00000427099 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
TRO-209ENST00000427099 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
TRO-209ENST00000427099 NCAPD3P42695 1498 aa27.19■■□□□ 1.94
TRO-209ENST00000427099 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
TRO-209ENST00000427099 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
TRO-209ENST00000427099 SMARCA2P51531 1590 aa27.07■■□□□ 1.92
TRO-209ENST00000427099 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
TRO-209ENST00000427099 HMGXB3Q12766 1538 aa26.98■■□□□ 1.91
TRO-209ENST00000427099 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
TRO-209ENST00000427099 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.9
TRO-209ENST00000427099 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
TRO-209ENST00000427099 ERCC6Q03468 1493 aa26.84■■□□□ 1.89
TRO-209ENST00000427099 NESP48681 1621 aa26.76■■□□□ 1.87
TRO-209ENST00000427099 CUX2O14529 1486 aa26.66■■□□□ 1.86
TRO-209ENST00000427099 WIZO95785 1651 aa26.59■■□□□ 1.85
TRO-209ENST00000427099 LAMC3Q9Y6N6 1575 aa26.55■■□□□ 1.84
TRO-209ENST00000427099 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
TRO-209ENST00000427099 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
TRO-209ENST00000427099 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
TRO-209ENST00000427099 RSF1Q96T23 1441 aaPredicted RBP26.4■■□□□ 1.82
TRO-209ENST00000427099 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
TRO-209ENST00000427099 THOC2Q8NI27 1593 aaKnown RBP26.37■■□□□ 1.81
TRO-209ENST00000427099 TOP2AP11388 1531 aaKnown RBP26.24■■□□□ 1.79
TRO-209ENST00000427099 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
TRO-209ENST00000427099 CFTRP13569 1480 aa26.11■■□□□ 1.77
TRO-209ENST00000427099 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
TRO-209ENST00000427099 CEP164Q9UPV0 1460 aa26.11■■□□□ 1.77
TRO-209ENST00000427099 WDR62O43379 1518 aa26.07■■□□□ 1.76
TRO-209ENST00000427099 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
TRO-209ENST00000427099 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
TRO-209ENST00000427099 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
TRO-209ENST00000427099 TOPBP1Q92547 1522 aa25.63■■□□□ 1.69
TRO-209ENST00000427099 ABCC8Q09428 1581 aa25.58■■□□□ 1.69
TRO-209ENST00000427099 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
TRO-209ENST00000427099 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
TRO-209ENST00000427099 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
TRO-209ENST00000427099 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
TRO-209ENST00000427099 SUPT5HO00267 1087 aaKnown RBP25.52■■□□□ 1.68
TRO-209ENST00000427099 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
TRO-209ENST00000427099 EIF4G3O43432 1585 aaKnown RBP25.37■■□□□ 1.65
TRO-209ENST00000427099 POLA1P09884 1462 aaPredicted RBP25.37■■□□□ 1.65
TRO-209ENST00000427099 AQRO60306 1485 aaKnown RBP eCLIP25.36■■□□□ 1.65
TRO-209ENST00000427099 TARBP1Q13395 1621 aaKnown RBP25.35■■□□□ 1.65
TRO-209ENST00000427099 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
TRO-209ENST00000427099 SOGA1O94964 1423 aa25.31■■□□□ 1.64
TRO-209ENST00000427099 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
TRO-209ENST00000427099 CUX1P39880 1505 aa25.25■■□□□ 1.63
TRO-209ENST00000427099 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
TRO-209ENST00000427099 FBLN2P98095 1184 aa25.24■■□□□ 1.63
TRO-209ENST00000427099 CHD1O14646 1710 aa25.17■■□□□ 1.62
TRO-209ENST00000427099 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
TRO-209ENST00000427099 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
TRO-209ENST00000427099 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
TRO-209ENST00000427099 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
TRO-209ENST00000427099 ARHGEF11O15085 1522 aa25.08■■□□□ 1.61
TRO-209ENST00000427099 WDR97A6NE52 1622 aa25.08■■□□□ 1.6
TRO-209ENST00000427099 CHMP7Q8WUX9 453 aaPredicted RBP25.05■■□□□ 1.6
TRO-209ENST00000427099 GRIN2BQ13224 1484 aa25.03■■□□□ 1.6
TRO-209ENST00000427099 CYB5RLQ6IPT4 315 aa25■■□□□ 1.59
TRO-209ENST00000427099 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
TRO-209ENST00000427099 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
TRO-209ENST00000427099 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
TRO-209ENST00000427099 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
TRO-209ENST00000427099 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
TRO-209ENST00000427099 SYNJ2O15056 1496 aa24.91■■□□□ 1.58
TRO-209ENST00000427099 SYNJ1O43426 1573 aa24.89■■□□□ 1.58
TRO-209ENST00000427099 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
TRO-209ENST00000427099 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
TRO-209ENST00000427099 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
TRO-209ENST00000427099 ARAP1Q96P48 1450 aa24.85■■□□□ 1.57
TRO-209ENST00000427099 CLASP1Q7Z460 1538 aa24.85■■□□□ 1.57
TRO-209ENST00000427099 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
TRO-209ENST00000427099 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
TRO-209ENST00000427099 ADAMTS12P58397 1594 aa24.68■■□□□ 1.54
TRO-209ENST00000427099 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
TRO-209ENST00000427099 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.53
TRO-209ENST00000427099 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
TRO-209ENST00000427099 NUP160Q12769 1436 aa24.59■■□□□ 1.53
TRO-209ENST00000427099 ERCC6L2Q5T890 1561 aa24.52■■□□□ 1.52
TRO-209ENST00000427099 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
TRO-209ENST00000427099 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
TRO-209ENST00000427099 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
TRO-209ENST00000427099 IGF1RP08069 1367 aa24.42■■□□□ 1.5
TRO-209ENST00000427099 PRG4Q92954 1404 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms