RNA–Protein interactions for RNA: ENST00000426879.5

PHF11-203, Transcript of PHD finger protein 11, humanhuman

TSL 2

Gene PHF11, Length 903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-203ENST00000426879 NISCHQ9Y2I1 1504 aa51.16■■■■■ 5.78
PHF11-203ENST00000426879 CCDC180Q9P1Z9 1646 aa45.63■■■■■ 4.9
PHF11-203ENST00000426879 ABCC9O60706 1549 aa45.24■■■■■ 4.83
PHF11-203ENST00000426879 RB1CC1Q8TDY2 1594 aa43.27■■■■■ 4.52
PHF11-203ENST00000426879 NACADO15069 1562 aa43.12■■■■■ 4.49
PHF11-203ENST00000426879 DCAF8L2P0C7V8 631 aa42.96■■■■■ 4.47
PHF11-203ENST00000426879 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
PHF11-203ENST00000426879 ZCCHC6Q5VYS8 1495 aaKnown RBP42.49■■■■■ 4.39
PHF11-203ENST00000426879 DCAF1Q9Y4B6 1507 aa42.33■■■■■ 4.37
PHF11-203ENST00000426879 PABPN1Q86U42 306 aaKnown RBP eCLIP42.23■■■■■ 4.35
PHF11-203ENST00000426879 UNC13AQ9UPW8 1703 aa42.15■■■■■ 4.34
PHF11-203ENST00000426879 DNAJC5BQ9UF47 199 aa42.13■■■■■ 4.33
PHF11-203ENST00000426879 BICRAQ9NZM4 1560 aa42■■■■■ 4.31
PHF11-203ENST00000426879 SCRIBQ14160 1630 aa41.58■■■■■ 4.25
PHF11-203ENST00000426879 SHROOM4Q9ULL8 1493 aa41.56■■■■■ 4.24
PHF11-203ENST00000426879 EIF4G1Q04637 1599 aaKnown RBP40.93■■■■■ 4.14
PHF11-203ENST00000426879 CC2D2AQ9P2K1 1620 aa40.88■■■■■ 4.13
PHF11-203ENST00000426879 CECR2Q9BXF3 1484 aa40.75■■■■■ 4.11
PHF11-203ENST00000426879 NCAPD3P42695 1498 aa39.86■■■■□ 3.97
PHF11-203ENST00000426879 ATAD2BQ9ULI0 1458 aa39.76■■■■□ 3.96
PHF11-203ENST00000426879 SMARCA4P51532 1647 aa39.76■■■■□ 3.95
PHF11-203ENST00000426879 BAZ1AQ9NRL2 1556 aaPredicted RBP39.66■■■■□ 3.94
PHF11-203ENST00000426879 SMARCA2P51531 1590 aa39.65■■■■□ 3.94
PHF11-203ENST00000426879 HMGXB3Q12766 1538 aa39.54■■■■□ 3.92
PHF11-203ENST00000426879 PEG3Q9GZU2 1588 aa39.43■■■■□ 3.9
PHF11-203ENST00000426879 MROH2BQ7Z745 1585 aa39.39■■■■□ 3.9
PHF11-203ENST00000426879 BAZ1BQ9UIG0 1483 aaKnown RBP39.36■■■■□ 3.89
PHF11-203ENST00000426879 ERCC6Q03468 1493 aa39.04■■■■□ 3.84
PHF11-203ENST00000426879 NESP48681 1621 aa38.99■■■■□ 3.83
PHF11-203ENST00000426879 WIZO95785 1651 aa38.87■■■■□ 3.81
PHF11-203ENST00000426879 CUX2O14529 1486 aa38.87■■■■□ 3.81
PHF11-203ENST00000426879 LAMC3Q9Y6N6 1575 aa38.81■■■■□ 3.8
PHF11-203ENST00000426879 RSF1Q96T23 1441 aaPredicted RBP38.79■■■■□ 3.8
PHF11-203ENST00000426879 CADPSQ9ULU8 1353 aa38.66■■■■□ 3.78
PHF11-203ENST00000426879 PDS5BQ9NTI5 1447 aa38.63■■■■□ 3.78
PHF11-203ENST00000426879 THOC2Q8NI27 1593 aaKnown RBP38.48■■■■□ 3.75
PHF11-203ENST00000426879 TOP2AP11388 1531 aaKnown RBP38.48■■■■□ 3.75
PHF11-203ENST00000426879 DNAJC5Q9H3Z4 198 aa38.41■■■■□ 3.74
PHF11-203ENST00000426879 KIF21AQ7Z4S6 1674 aa38.41■■■■□ 3.74
PHF11-203ENST00000426879 CFTRP13569 1480 aa38.3■■■■□ 3.72
PHF11-203ENST00000426879 MRC2Q9UBG0 1479 aa38.22■■■■□ 3.71
PHF11-203ENST00000426879 FANCD2Q9BXW9 1451 aa38.16■■■■□ 3.7
PHF11-203ENST00000426879 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
PHF11-203ENST00000426879 WDR62O43379 1518 aa38.11■■■■□ 3.69
PHF11-203ENST00000426879 CCDC88BA6NC98 1476 aa38.07■■■■□ 3.68
PHF11-203ENST00000426879 URB2Q14146 1524 aaKnown RBP37.81■■■■□ 3.64
PHF11-203ENST00000426879 PRDM2Q13029 1718 aa37.75■■■■□ 3.63
PHF11-203ENST00000426879 ABCC8Q09428 1581 aa37.48■■■■□ 3.59
PHF11-203ENST00000426879 TOPBP1Q92547 1522 aa37.48■■■■□ 3.59
PHF11-203ENST00000426879 IFT140Q96RY7 1462 aa37.41■■■■□ 3.58
PHF11-203ENST00000426879 DNMBPQ6XZF7 1577 aa37.37■■■■□ 3.57
PHF11-203ENST00000426879 SUPT5HO00267 1087 aaKnown RBP37.34■■■■□ 3.57
PHF11-203ENST00000426879 ZNF608Q9ULD9 1512 aaPredicted RBP37.27■■■■□ 3.56
PHF11-203ENST00000426879 OSCARQ8IYS5 282 aa37.21■■■■□ 3.55
PHF11-203ENST00000426879 POLA1P09884 1462 aaPredicted RBP37.13■■■■□ 3.54
PHF11-203ENST00000426879 TARBP1Q13395 1621 aaKnown RBP37.1■■■■□ 3.53
PHF11-203ENST00000426879 EIF4G3O43432 1585 aaKnown RBP37.03■■■■□ 3.52
PHF11-203ENST00000426879 SOGA1O94964 1423 aa37■■■■□ 3.51
PHF11-203ENST00000426879 AQRO60306 1485 aaKnown RBP eCLIP37■■■■□ 3.51
PHF11-203ENST00000426879 CUX1P39880 1505 aa36.99■■■■□ 3.51
PHF11-203ENST00000426879 RAD54L2Q9Y4B4 1467 aa36.97■■■■□ 3.51
PHF11-203ENST00000426879 FGD5Q6ZNL6 1462 aa36.94■■■■□ 3.5
PHF11-203ENST00000426879 TDRD9Q8NDG6 1382 aaKnown RBP36.85■■■■□ 3.49
PHF11-203ENST00000426879 TRIM41Q8WV44 630 aa36.8■■■■□ 3.48
PHF11-203ENST00000426879 WDR97A6NE52 1622 aa36.78■■■■□ 3.48
PHF11-203ENST00000426879 FBLN2P98095 1184 aa36.65■■■■□ 3.46
PHF11-203ENST00000426879 GRIN2BQ13224 1484 aa36.62■■■■□ 3.45
PHF11-203ENST00000426879 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
PHF11-203ENST00000426879 CHD1O14646 1710 aa36.61■■■■□ 3.45
PHF11-203ENST00000426879 ABCA10Q8WWZ4 1543 aa36.59■■■■□ 3.45
PHF11-203ENST00000426879 MAGI1Q96QZ7 1491 aaPredicted RBP36.57■■■■□ 3.45
PHF11-203ENST00000426879 WRNQ14191 1432 aaPredicted RBP eCLIP36.56■■■■□ 3.44
PHF11-203ENST00000426879 RIMBP3CA6NJZ7 1639 aa36.56■■■■□ 3.44
PHF11-203ENST00000426879 RIMBP3BA6NNM3 1639 aa36.56■■■■□ 3.44
PHF11-203ENST00000426879 RIMBP3Q9UFD9 1639 aa36.56■■■■□ 3.44
PHF11-203ENST00000426879 GAPVD1Q14C86 1478 aa36.55■■■■□ 3.44
PHF11-203ENST00000426879 ARHGEF11O15085 1522 aa36.54■■■■□ 3.44
PHF11-203ENST00000426879 TOP2BQ02880 1626 aa36.5■■■■□ 3.43
PHF11-203ENST00000426879 CHMP7Q8WUX9 453 aaPredicted RBP36.5■■■■□ 3.43
PHF11-203ENST00000426879 BIVM-ERCC5R4GMW8 1640 aa36.47■■■■□ 3.43
PHF11-203ENST00000426879 SYNJ1O43426 1573 aa36.44■■■■□ 3.42
PHF11-203ENST00000426879 SYNJ2O15056 1496 aa36.44■■■■□ 3.42
PHF11-203ENST00000426879 ABCA5Q8WWZ7 1642 aa36.43■■■■□ 3.42
PHF11-203ENST00000426879 PBRM1Q86U86 1689 aa36.36■■■■□ 3.41
PHF11-203ENST00000426879 CLASP1Q7Z460 1538 aa36.32■■■■□ 3.4
PHF11-203ENST00000426879 CYB5RLQ6IPT4 315 aa36.28■■■■□ 3.4
PHF11-203ENST00000426879 ARAP1Q96P48 1450 aa36.21■■■■□ 3.39
PHF11-203ENST00000426879 GRIN2AQ12879 1464 aa36.13■■■■□ 3.37
PHF11-203ENST00000426879 ERICH3Q5RHP9 1530 aa36.13■■■■□ 3.37
PHF11-203ENST00000426879 ADAMTS12P58397 1594 aa36.12■■■■□ 3.37
PHF11-203ENST00000426879 FHAD1B1AJZ9 1412 aa36.12■■■■□ 3.37
PHF11-203ENST00000426879 NUP160Q12769 1436 aa36.03■■■■□ 3.36
PHF11-203ENST00000426879 CEP170Q5SW79 1584 aa35.93■■■■□ 3.34
PHF11-203ENST00000426879 KIF27Q86VH2 1401 aa35.86■■■■□ 3.33
PHF11-203ENST00000426879 IGF1RP08069 1367 aa35.83■■■■□ 3.33
PHF11-203ENST00000426879 SHROOM2Q13796 1616 aa35.75■■■■□ 3.31
PHF11-203ENST00000426879 ERCC6L2Q5T890 1561 aa35.75■■■■□ 3.31
PHF11-203ENST00000426879 TRHP20396 242 aaPredicted RBP35.69■■■■□ 3.3
PHF11-203ENST00000426879 JPH4Q96JJ6 628 aa35.69■■■■□ 3.3
PHF11-203ENST00000426879 CUL7Q14999 1698 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms