RNA–Protein interactions for RNA: ENST00000426858.1

GCAT-204, Transcript of glycine C-acetyltransferase, humanhuman

TSL 4

Gene GCAT, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCAT-204ENST00000426858 NISCHQ9Y2I1 1504 aa43.39■■■■■ 4.54
GCAT-204ENST00000426858 CCDC180Q9P1Z9 1646 aa38.6■■■■□ 3.77
GCAT-204ENST00000426858 ABCC9O60706 1549 aa38.01■■■■□ 3.67
GCAT-204ENST00000426858 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
GCAT-204ENST00000426858 NACADO15069 1562 aa36.36■■■■□ 3.41
GCAT-204ENST00000426858 DCAF8L2P0C7V8 631 aa36.24■■■■□ 3.39
GCAT-204ENST00000426858 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.37
GCAT-204ENST00000426858 ZCCHC6Q5VYS8 1495 aaKnown RBP36.11■■■■□ 3.37
GCAT-204ENST00000426858 DCAF1Q9Y4B6 1507 aa35.89■■■■□ 3.34
GCAT-204ENST00000426858 UNC13AQ9UPW8 1703 aa35.65■■■■□ 3.3
GCAT-204ENST00000426858 PABPN1Q86U42 306 aaKnown RBP eCLIP35.51■■■■□ 3.28
GCAT-204ENST00000426858 BICRAQ9NZM4 1560 aa35.44■■■■□ 3.26
GCAT-204ENST00000426858 SCRIBQ14160 1630 aa35.21■■■■□ 3.23
GCAT-204ENST00000426858 DNAJC5BQ9UF47 199 aa35.21■■■■□ 3.23
GCAT-204ENST00000426858 SHROOM4Q9ULL8 1493 aa34.97■■■■□ 3.19
GCAT-204ENST00000426858 EIF4G1Q04637 1599 aaKnown RBP34.46■■■■□ 3.11
GCAT-204ENST00000426858 CC2D2AQ9P2K1 1620 aa34.37■■■■□ 3.09
GCAT-204ENST00000426858 CECR2Q9BXF3 1484 aa34.17■■■■□ 3.06
GCAT-204ENST00000426858 SMARCA4P51532 1647 aa33.69■■■□□ 2.98
GCAT-204ENST00000426858 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
GCAT-204ENST00000426858 BAZ1AQ9NRL2 1556 aaPredicted RBP33.6■■■□□ 2.97
GCAT-204ENST00000426858 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
GCAT-204ENST00000426858 SMARCA2P51531 1590 aa33.47■■■□□ 2.95
GCAT-204ENST00000426858 MROH2BQ7Z745 1585 aa33.46■■■□□ 2.95
GCAT-204ENST00000426858 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
GCAT-204ENST00000426858 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
GCAT-204ENST00000426858 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
GCAT-204ENST00000426858 WIZO95785 1651 aa33.05■■■□□ 2.88
GCAT-204ENST00000426858 RSF1Q96T23 1441 aaPredicted RBP33.01■■■□□ 2.87
GCAT-204ENST00000426858 NESP48681 1621 aa32.88■■■□□ 2.85
GCAT-204ENST00000426858 ERCC6Q03468 1493 aa32.7■■■□□ 2.83
GCAT-204ENST00000426858 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
GCAT-204ENST00000426858 TOP2AP11388 1531 aaKnown RBP32.68■■■□□ 2.82
GCAT-204ENST00000426858 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
GCAT-204ENST00000426858 CUX2O14529 1486 aa32.48■■■□□ 2.79
GCAT-204ENST00000426858 PDS5BQ9NTI5 1447 aa32.47■■■□□ 2.79
GCAT-204ENST00000426858 KIF21AQ7Z4S6 1674 aa32.42■■■□□ 2.78
GCAT-204ENST00000426858 THOC2Q8NI27 1593 aaKnown RBP32.39■■■□□ 2.78
GCAT-204ENST00000426858 CFTRP13569 1480 aa32.38■■■□□ 2.77
GCAT-204ENST00000426858 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
GCAT-204ENST00000426858 FANCD2Q9BXW9 1451 aa32.21■■■□□ 2.75
GCAT-204ENST00000426858 MRC2Q9UBG0 1479 aa32.17■■■□□ 2.74
GCAT-204ENST00000426858 CEP164Q9UPV0 1460 aa32.16■■■□□ 2.74
GCAT-204ENST00000426858 WDR62O43379 1518 aa32.1■■■□□ 2.73
GCAT-204ENST00000426858 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
GCAT-204ENST00000426858 SUPT5HO00267 1087 aaKnown RBP31.94■■■□□ 2.7
GCAT-204ENST00000426858 URB2Q14146 1524 aaKnown RBP31.94■■■□□ 2.7
GCAT-204ENST00000426858 DNAJC5Q9H3Z4 198 aa31.79■■■□□ 2.68
GCAT-204ENST00000426858 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
GCAT-204ENST00000426858 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
GCAT-204ENST00000426858 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
GCAT-204ENST00000426858 IFT140Q96RY7 1462 aa31.51■■■□□ 2.63
GCAT-204ENST00000426858 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
GCAT-204ENST00000426858 POLA1P09884 1462 aaPredicted RBP31.41■■■□□ 2.62
GCAT-204ENST00000426858 CUX1P39880 1505 aa31.39■■■□□ 2.61
GCAT-204ENST00000426858 TARBP1Q13395 1621 aaKnown RBP31.37■■■□□ 2.61
GCAT-204ENST00000426858 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
GCAT-204ENST00000426858 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
GCAT-204ENST00000426858 SOGA1O94964 1423 aa31.25■■■□□ 2.59
GCAT-204ENST00000426858 EIF4G3O43432 1585 aaKnown RBP31.25■■■□□ 2.59
GCAT-204ENST00000426858 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.597e-13■■■■■ 28
GCAT-204ENST00000426858 TDRD9Q8NDG6 1382 aaKnown RBP31.13■■■□□ 2.57
GCAT-204ENST00000426858 OSCARQ8IYS5 282 aa31.1■■■□□ 2.57
GCAT-204ENST00000426858 WRNQ14191 1432 aaPredicted RBP eCLIP31.07■■■□□ 2.571e-6■■■■■ 58.5
GCAT-204ENST00000426858 WDR97A6NE52 1622 aa31.04■■■□□ 2.56
GCAT-204ENST00000426858 TOP2BQ02880 1626 aa31.03■■■□□ 2.56
GCAT-204ENST00000426858 SYNJ1O43426 1573 aa31.03■■■□□ 2.56
GCAT-204ENST00000426858 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
GCAT-204ENST00000426858 ABCA10Q8WWZ4 1543 aa30.98■■■□□ 2.55
GCAT-204ENST00000426858 GRIN2BQ13224 1484 aa30.9■■■□□ 2.54
GCAT-204ENST00000426858 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.54
GCAT-204ENST00000426858 CHD1O14646 1710 aa30.88■■■□□ 2.53
GCAT-204ENST00000426858 GAPVD1Q14C86 1478 aa30.88■■■□□ 2.53
GCAT-204ENST00000426858 ABCA5Q8WWZ7 1642 aa30.87■■■□□ 2.53
GCAT-204ENST00000426858 MAGI1Q96QZ7 1491 aaPredicted RBP30.83■■■□□ 2.53
GCAT-204ENST00000426858 FBLN2P98095 1184 aa30.8■■■□□ 2.52
GCAT-204ENST00000426858 PBRM1Q86U86 1689 aa30.79■■■□□ 2.52
GCAT-204ENST00000426858 SYNJ2O15056 1496 aa30.73■■■□□ 2.51
GCAT-204ENST00000426858 CHMP7Q8WUX9 453 aaPredicted RBP30.7■■■□□ 2.51
GCAT-204ENST00000426858 RIMBP3CA6NJZ7 1639 aa30.64■■■□□ 2.5
GCAT-204ENST00000426858 RIMBP3BA6NNM3 1639 aa30.64■■■□□ 2.5
GCAT-204ENST00000426858 RIMBP3Q9UFD9 1639 aa30.64■■■□□ 2.5
GCAT-204ENST00000426858 ARHGEF11O15085 1522 aa30.62■■■□□ 2.49
GCAT-204ENST00000426858 CLASP1Q7Z460 1538 aa30.6■■■□□ 2.49
GCAT-204ENST00000426858 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
GCAT-204ENST00000426858 ADAMTS12P58397 1594 aa30.58■■■□□ 2.49
GCAT-204ENST00000426858 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
GCAT-204ENST00000426858 GRIN2AQ12879 1464 aa30.52■■■□□ 2.48
GCAT-204ENST00000426858 FHAD1B1AJZ9 1412 aa30.52■■■□□ 2.48
GCAT-204ENST00000426858 NUP160Q12769 1436 aa30.43■■■□□ 2.46
GCAT-204ENST00000426858 KIF27Q86VH2 1401 aa30.41■■■□□ 2.46
GCAT-204ENST00000426858 IGF1RP08069 1367 aa30.41■■■□□ 2.46
GCAT-204ENST00000426858 CEP170Q5SW79 1584 aa30.4■■■□□ 2.46
GCAT-204ENST00000426858 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
GCAT-204ENST00000426858 CYB5RLQ6IPT4 315 aa30.34■■■□□ 2.45
GCAT-204ENST00000426858 CUL7Q14999 1698 aa30.22■■■□□ 2.43
GCAT-204ENST00000426858 SHROOM2Q13796 1616 aa30.2■■■□□ 2.43
GCAT-204ENST00000426858 ERCC6L2Q5T890 1561 aa30.2■■■□□ 2.42
GCAT-204ENST00000426858 RUSC2Q8N2Y8 1516 aa30.17■■■□□ 2.42
GCAT-204ENST00000426858 CARMIL1Q5VZK9 1371 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms