RNA–Protein interactions for RNA: ENST00000426596.1

SDK1-203, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 2

Gene SDK1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-203ENST00000426596 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
SDK1-203ENST00000426596 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
SDK1-203ENST00000426596 ABCC9O60706 1549 aa32.92■■■□□ 2.86
SDK1-203ENST00000426596 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
SDK1-203ENST00000426596 NACADO15069 1562 aa31.15■■■□□ 2.58
SDK1-203ENST00000426596 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
SDK1-203ENST00000426596 DNAJC5BQ9UF47 199 aa30.91■■■□□ 2.54
SDK1-203ENST00000426596 MYO15BQ96JP2 1530 aa30.8■■■□□ 2.52
SDK1-203ENST00000426596 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
SDK1-203ENST00000426596 UNC13AQ9UPW8 1703 aa30.66■■■□□ 2.5
SDK1-203ENST00000426596 ZCCHC6Q5VYS8 1495 aaKnown RBP30.65■■■□□ 2.5
SDK1-203ENST00000426596 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
SDK1-203ENST00000426596 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
SDK1-203ENST00000426596 SCRIBQ14160 1630 aa30.11■■■□□ 2.41
SDK1-203ENST00000426596 SHROOM4Q9ULL8 1493 aa29.96■■■□□ 2.39
SDK1-203ENST00000426596 CC2D2AQ9P2K1 1620 aa29.71■■■□□ 2.35
SDK1-203ENST00000426596 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
SDK1-203ENST00000426596 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
SDK1-203ENST00000426596 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
SDK1-203ENST00000426596 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
SDK1-203ENST00000426596 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
SDK1-203ENST00000426596 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
SDK1-203ENST00000426596 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
SDK1-203ENST00000426596 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
SDK1-203ENST00000426596 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
SDK1-203ENST00000426596 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
SDK1-203ENST00000426596 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
SDK1-203ENST00000426596 NESP48681 1621 aa28.38■■■□□ 2.13
SDK1-203ENST00000426596 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
SDK1-203ENST00000426596 CUX2O14529 1486 aa28.21■■■□□ 2.11
SDK1-203ENST00000426596 WIZO95785 1651 aa28.14■■■□□ 2.1
SDK1-203ENST00000426596 DNAJC5Q9H3Z4 198 aa28.12■■■□□ 2.09
SDK1-203ENST00000426596 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
SDK1-203ENST00000426596 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
SDK1-203ENST00000426596 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
SDK1-203ENST00000426596 CADPSQ9ULU8 1353 aa27.96■■■□□ 2.07
SDK1-203ENST00000426596 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
SDK1-203ENST00000426596 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
SDK1-203ENST00000426596 TOP2AP11388 1531 aaKnown RBP27.75■■■□□ 2.03
SDK1-203ENST00000426596 CFTRP13569 1480 aa27.68■■■□□ 2.02
SDK1-203ENST00000426596 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
SDK1-203ENST00000426596 WDR62O43379 1518 aa27.62■■■□□ 2.01
SDK1-203ENST00000426596 FANCD2Q9BXW9 1451 aa27.62■■■□□ 2.01
SDK1-203ENST00000426596 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
SDK1-203ENST00000426596 CCDC88BA6NC98 1476 aa27.51■■□□□ 1.99
SDK1-203ENST00000426596 URB2Q14146 1524 aaKnown RBP27.44■■□□□ 1.98
SDK1-203ENST00000426596 PRDM2Q13029 1718 aa27.27■■□□□ 1.96
SDK1-203ENST00000426596 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
SDK1-203ENST00000426596 ZNF608Q9ULD9 1512 aaPredicted RBP27.09■■□□□ 1.93
SDK1-203ENST00000426596 IFT140Q96RY7 1462 aa27.04■■□□□ 1.92
SDK1-203ENST00000426596 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
SDK1-203ENST00000426596 OSCARQ8IYS5 282 aa26.98■■□□□ 1.91
SDK1-203ENST00000426596 ABCC8Q09428 1581 aa26.97■■□□□ 1.91
SDK1-203ENST00000426596 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
SDK1-203ENST00000426596 TRIM41Q8WV44 630 aa26.89■■□□□ 1.9
SDK1-203ENST00000426596 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
SDK1-203ENST00000426596 AQRO60306 1485 aaKnown RBP eCLIP26.85■■□□□ 1.89
SDK1-203ENST00000426596 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
SDK1-203ENST00000426596 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
SDK1-203ENST00000426596 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
SDK1-203ENST00000426596 AEBP2Q6ZN18 517 aaPredicted RBP26.8■■□□□ 1.88
SDK1-203ENST00000426596 CUX1P39880 1505 aa26.76■■□□□ 1.87
SDK1-203ENST00000426596 SOGA1O94964 1423 aa26.73■■□□□ 1.87
SDK1-203ENST00000426596 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
SDK1-203ENST00000426596 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
SDK1-203ENST00000426596 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
SDK1-203ENST00000426596 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
SDK1-203ENST00000426596 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
SDK1-203ENST00000426596 CHD1O14646 1710 aa26.6■■□□□ 1.85
SDK1-203ENST00000426596 ARHGEF11O15085 1522 aa26.58■■□□□ 1.85
SDK1-203ENST00000426596 FBLN2P98095 1184 aa26.54■■□□□ 1.84
SDK1-203ENST00000426596 SNAPC4Q5SXM2 1469 aa26.52■■□□□ 1.84
SDK1-203ENST00000426596 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
SDK1-203ENST00000426596 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
SDK1-203ENST00000426596 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
SDK1-203ENST00000426596 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
SDK1-203ENST00000426596 GAPVD1Q14C86 1478 aa26.4■■□□□ 1.82
SDK1-203ENST00000426596 CYB5RLQ6IPT4 315 aa26.38■■□□□ 1.81
SDK1-203ENST00000426596 CHMP7Q8WUX9 453 aaPredicted RBP26.37■■□□□ 1.81
SDK1-203ENST00000426596 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
SDK1-203ENST00000426596 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
SDK1-203ENST00000426596 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
SDK1-203ENST00000426596 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
SDK1-203ENST00000426596 SYNJ1O43426 1573 aa26.34■■□□□ 1.81
SDK1-203ENST00000426596 PBRM1Q86U86 1689 aa26.32■■□□□ 1.8
SDK1-203ENST00000426596 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
SDK1-203ENST00000426596 TOP2BQ02880 1626 aa26.31■■□□□ 1.8
SDK1-203ENST00000426596 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
SDK1-203ENST00000426596 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
SDK1-203ENST00000426596 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
SDK1-203ENST00000426596 NUP160Q12769 1436 aa26.07■■□□□ 1.76
SDK1-203ENST00000426596 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
SDK1-203ENST00000426596 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
SDK1-203ENST00000426596 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
SDK1-203ENST00000426596 ERCC6L2Q5T890 1561 aa26.04■■□□□ 1.76
SDK1-203ENST00000426596 TRHP20396 242 aaPredicted RBP25.94■■□□□ 1.74
SDK1-203ENST00000426596 SHROOM2Q13796 1616 aa25.91■■□□□ 1.74
SDK1-203ENST00000426596 IGF1RP08069 1367 aa25.87■■□□□ 1.73
SDK1-203ENST00000426596 JPH4Q96JJ6 628 aa25.8■■□□□ 1.72
SDK1-203ENST00000426596 PRG4Q92954 1404 aaPredicted RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms