RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 NISCHQ9Y2I1 1504 aa54.19■■■■■ 6.27
SEMA3F-205ENST00000426511 CCDC180Q9P1Z9 1646 aa48.36■■■■■ 5.33
SEMA3F-205ENST00000426511 ABCC9O60706 1549 aa47.95■■■■■ 5.27
SEMA3F-205ENST00000426511 RB1CC1Q8TDY2 1594 aa45.8■■■■■ 4.92
SEMA3F-205ENST00000426511 DCAF8L2P0C7V8 631 aa45.73■■■■■ 4.91
SEMA3F-205ENST00000426511 NACADO15069 1562 aa45.59■■■■■ 4.89
SEMA3F-205ENST00000426511 MYO15BQ96JP2 1530 aa45.06■■■■■ 4.8
SEMA3F-205ENST00000426511 ZCCHC6Q5VYS8 1495 aaKnown RBP45.03■■■■■ 4.8
SEMA3F-205ENST00000426511 PABPN1Q86U42 306 aaKnown RBP eCLIP44.76■■■■■ 4.76
SEMA3F-205ENST00000426511 UNC13AQ9UPW8 1703 aa44.75■■■■■ 4.75
SEMA3F-205ENST00000426511 DCAF1Q9Y4B6 1507 aa44.71■■■■■ 4.75
SEMA3F-205ENST00000426511 BICRAQ9NZM4 1560 aa44.41■■■■■ 4.7
SEMA3F-205ENST00000426511 DNAJC5BQ9UF47 199 aa44.4■■■■■ 4.7
SEMA3F-205ENST00000426511 SCRIBQ14160 1630 aa44.24■■■■■ 4.67
SEMA3F-205ENST00000426511 SHROOM4Q9ULL8 1493 aa43.8■■■■■ 4.6
SEMA3F-205ENST00000426511 EIF4G1Q04637 1599 aaKnown RBP43.31■■■■■ 4.52
SEMA3F-205ENST00000426511 CC2D2AQ9P2K1 1620 aa43.28■■■■■ 4.52
SEMA3F-205ENST00000426511 CECR2Q9BXF3 1484 aa43.09■■■■■ 4.49
SEMA3F-205ENST00000426511 SMARCA4P51532 1647 aa42.17■■■■■ 4.34
SEMA3F-205ENST00000426511 NCAPD3P42695 1498 aa42.05■■■■■ 4.32
SEMA3F-205ENST00000426511 ATAD2BQ9ULI0 1458 aa42.05■■■■■ 4.32
SEMA3F-205ENST00000426511 BAZ1AQ9NRL2 1556 aaPredicted RBP42.05■■■■■ 4.32
SEMA3F-205ENST00000426511 SMARCA2P51531 1590 aa41.97■■■■■ 4.31
SEMA3F-205ENST00000426511 HMGXB3Q12766 1538 aa41.82■■■■■ 4.29
SEMA3F-205ENST00000426511 MROH2BQ7Z745 1585 aa41.8■■■■■ 4.28
SEMA3F-205ENST00000426511 BAZ1BQ9UIG0 1483 aaKnown RBP41.74■■■■■ 4.27
SEMA3F-205ENST00000426511 PEG3Q9GZU2 1588 aa41.67■■■■■ 4.26
SEMA3F-205ENST00000426511 ERCC6Q03468 1493 aa41.39■■■■■ 4.22
SEMA3F-205ENST00000426511 WIZO95785 1651 aa41.36■■■■■ 4.21
SEMA3F-205ENST00000426511 NESP48681 1621 aa41.33■■■■■ 4.21
SEMA3F-205ENST00000426511 RSF1Q96T23 1441 aaPredicted RBP41.12■■■■■ 4.17
SEMA3F-205ENST00000426511 LAMC3Q9Y6N6 1575 aa41.06■■■■■ 4.16
SEMA3F-205ENST00000426511 CUX2O14529 1486 aa40.99■■■■■ 4.15
SEMA3F-205ENST00000426511 CADPSQ9ULU8 1353 aa40.86■■■■■ 4.13
SEMA3F-205ENST00000426511 PDS5BQ9NTI5 1447 aa40.84■■■■■ 4.13
SEMA3F-205ENST00000426511 TOP2AP11388 1531 aaKnown RBP40.83■■■■■ 4.13
SEMA3F-205ENST00000426511 KIF21AQ7Z4S6 1674 aa40.8■■■■■ 4.12
SEMA3F-205ENST00000426511 THOC2Q8NI27 1593 aaKnown RBP40.74■■■■■ 4.11
SEMA3F-205ENST00000426511 CFTRP13569 1480 aa40.49■■■■■ 4.07
SEMA3F-205ENST00000426511 MRC2Q9UBG0 1479 aa40.45■■■■■ 4.07
SEMA3F-205ENST00000426511 FANCD2Q9BXW9 1451 aa40.44■■■■■ 4.06
SEMA3F-205ENST00000426511 CEP164Q9UPV0 1460 aa40.43■■■■■ 4.06
SEMA3F-205ENST00000426511 CCDC88BA6NC98 1476 aa40.38■■■■■ 4.05
SEMA3F-205ENST00000426511 DNAJC5Q9H3Z4 198 aa40.33■■■■■ 4.05
SEMA3F-205ENST00000426511 WDR62O43379 1518 aa40.3■■■■■ 4.04
SEMA3F-205ENST00000426511 PRDM2Q13029 1718 aa40.14■■■■■ 4.02
SEMA3F-205ENST00000426511 URB2Q14146 1524 aaKnown RBP40.05■■■■■ 4
SEMA3F-205ENST00000426511 SUPT5HO00267 1087 aaKnown RBP39.91■■■■□ 3.98
SEMA3F-205ENST00000426511 TOPBP1Q92547 1522 aa39.71■■■■□ 3.95
SEMA3F-205ENST00000426511 ABCC8Q09428 1581 aa39.63■■■■□ 3.93
SEMA3F-205ENST00000426511 DNMBPQ6XZF7 1577 aa39.62■■■■□ 3.93
SEMA3F-205ENST00000426511 IFT140Q96RY7 1462 aa39.57■■■■□ 3.93
SEMA3F-205ENST00000426511 ZNF608Q9ULD9 1512 aaPredicted RBP39.48■■■■□ 3.91
SEMA3F-205ENST00000426511 POLA1P09884 1462 aaPredicted RBP39.35■■■■□ 3.89
SEMA3F-205ENST00000426511 EIF4G3O43432 1585 aaKnown RBP39.29■■■■□ 3.88
SEMA3F-205ENST00000426511 TARBP1Q13395 1621 aaKnown RBP39.29■■■■□ 3.88
SEMA3F-205ENST00000426511 OSCARQ8IYS5 282 aa39.28■■■■□ 3.88
SEMA3F-205ENST00000426511 CUX1P39880 1505 aa39.24■■■■□ 3.87
SEMA3F-205ENST00000426511 RAD54L2Q9Y4B4 1467 aa39.24■■■■□ 3.87
SEMA3F-205ENST00000426511 AQRO60306 1485 aaKnown RBP eCLIP39.21■■■■□ 3.87
SEMA3F-205ENST00000426511 FGD5Q6ZNL6 1462 aa39.21■■■■□ 3.87
SEMA3F-205ENST00000426511 SOGA1O94964 1423 aa39.2■■■■□ 3.87
SEMA3F-205ENST00000426511 TDRD9Q8NDG6 1382 aaKnown RBP39.08■■■■□ 3.85
SEMA3F-205ENST00000426511 TRIM41Q8WV44 630 aa38.99■■■■□ 3.83
SEMA3F-205ENST00000426511 FBLN2P98095 1184 aa38.96■■■■□ 3.83
SEMA3F-205ENST00000426511 CHD1O14646 1710 aa38.91■■■■□ 3.82
SEMA3F-205ENST00000426511 WDR97A6NE52 1622 aa38.88■■■■□ 3.81
SEMA3F-205ENST00000426511 SNAPC4Q5SXM2 1469 aa38.84■■■■□ 3.81
SEMA3F-205ENST00000426511 WRNQ14191 1432 aaPredicted RBP eCLIP38.82■■■■□ 3.81
SEMA3F-205ENST00000426511 GRIN2BQ13224 1484 aa38.78■■■■□ 3.8
SEMA3F-205ENST00000426511 SYNJ1O43426 1573 aa38.76■■■■□ 3.8
SEMA3F-205ENST00000426511 TOP2BQ02880 1626 aa38.74■■■■□ 3.79
SEMA3F-205ENST00000426511 BIVM-ERCC5R4GMW8 1640 aa38.74■■■■□ 3.79
SEMA3F-205ENST00000426511 ABCA10Q8WWZ4 1543 aa38.73■■■■□ 3.79
SEMA3F-205ENST00000426511 GAPVD1Q14C86 1478 aa38.73■■■■□ 3.79
SEMA3F-205ENST00000426511 MAGI1Q96QZ7 1491 aaPredicted RBP38.7■■■■□ 3.79
SEMA3F-205ENST00000426511 RIMBP3CA6NJZ7 1639 aa38.7■■■■□ 3.79
SEMA3F-205ENST00000426511 RIMBP3BA6NNM3 1639 aa38.7■■■■□ 3.79
SEMA3F-205ENST00000426511 RIMBP3Q9UFD9 1639 aa38.7■■■■□ 3.79
SEMA3F-205ENST00000426511 CHMP7Q8WUX9 453 aaPredicted RBP38.69■■■■□ 3.78
SEMA3F-205ENST00000426511 PBRM1Q86U86 1689 aa38.68■■■■□ 3.78
SEMA3F-205ENST00000426511 ABCA5Q8WWZ7 1642 aa38.63■■■■□ 3.78
SEMA3F-205ENST00000426511 ARHGEF11O15085 1522 aa38.63■■■■□ 3.77
SEMA3F-205ENST00000426511 SYNJ2O15056 1496 aa38.57■■■■□ 3.76
SEMA3F-205ENST00000426511 CLASP1Q7Z460 1538 aa38.41■■■■□ 3.74
SEMA3F-205ENST00000426511 CYB5RLQ6IPT4 315 aa38.38■■■■□ 3.73
SEMA3F-205ENST00000426511 ADAMTS12P58397 1594 aa38.33■■■■□ 3.73
SEMA3F-205ENST00000426511 ARAP1Q96P48 1450 aa38.28■■■■□ 3.72
SEMA3F-205ENST00000426511 GRIN2AQ12879 1464 aa38.28■■■■□ 3.72
SEMA3F-205ENST00000426511 ERICH3Q5RHP9 1530 aa38.27■■■■□ 3.72
SEMA3F-205ENST00000426511 FHAD1B1AJZ9 1412 aa38.24■■■■□ 3.71
SEMA3F-205ENST00000426511 CEP170Q5SW79 1584 aa38.12■■■■□ 3.69
SEMA3F-205ENST00000426511 NUP160Q12769 1436 aa38.08■■■■□ 3.69
SEMA3F-205ENST00000426511 KIF27Q86VH2 1401 aa38.04■■■■□ 3.68
SEMA3F-205ENST00000426511 IGF1RP08069 1367 aa37.93■■■■□ 3.66
SEMA3F-205ENST00000426511 ERCC6L2Q5T890 1561 aa37.92■■■■□ 3.66
SEMA3F-205ENST00000426511 CUL7Q14999 1698 aa37.85■■■■□ 3.65
SEMA3F-205ENST00000426511 SHROOM2Q13796 1616 aa37.84■■■■□ 3.65
SEMA3F-205ENST00000426511 TRHP20396 242 aaPredicted RBP37.84■■■■□ 3.65
SEMA3F-205ENST00000426511 RUSC2Q8N2Y8 1516 aa37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms