RNA–Protein interactions for RNA: ENST00000426442.6

PCLO-204, Transcript of piccolo presynaptic cytomatrix protein, humanhuman

TSL 1 (best)

Gene PCLO, Length 1,684 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLO-204ENST00000426442 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
PCLO-204ENST00000426442 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
PCLO-204ENST00000426442 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
PCLO-204ENST00000426442 ABCC9O60706 1549 aa16.04■□□□□ 0.16
PCLO-204ENST00000426442 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
PCLO-204ENST00000426442 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
PCLO-204ENST00000426442 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
PCLO-204ENST00000426442 MYO15BQ96JP2 1530 aa15.64■□□□□ 0.09
PCLO-204ENST00000426442 NACADO15069 1562 aa15.61■□□□□ 0.09
PCLO-204ENST00000426442 RB1CC1Q8TDY2 1594 aa15.55■□□□□ 0.08
PCLO-204ENST00000426442 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
PCLO-204ENST00000426442 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
PCLO-204ENST00000426442 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
PCLO-204ENST00000426442 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
PCLO-204ENST00000426442 BICRAQ9NZM4 1560 aa15.1■□□□□ 0.01
PCLO-204ENST00000426442 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
PCLO-204ENST00000426442 CECR2Q9BXF3 1484 aa14.73□□□□□ -0.05
PCLO-204ENST00000426442 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
PCLO-204ENST00000426442 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
PCLO-204ENST00000426442 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
PCLO-204ENST00000426442 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
PCLO-204ENST00000426442 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
PCLO-204ENST00000426442 CC2D2AQ9P2K1 1620 aa14.53□□□□□ -0.08
PCLO-204ENST00000426442 PEG3Q9GZU2 1588 aa14.49□□□□□ -0.09
PCLO-204ENST00000426442 ATAD2BQ9ULI0 1458 aa14.47□□□□□ -0.09
PCLO-204ENST00000426442 WIZO95785 1651 aa14.46□□□□□ -0.09
PCLO-204ENST00000426442 SMARCA2P51531 1590 aa14.46□□□□□ -0.1
PCLO-204ENST00000426442 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.1
PCLO-204ENST00000426442 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
PCLO-204ENST00000426442 SUPT5HO00267 1087 aaKnown RBP14.39□□□□□ -0.11
PCLO-204ENST00000426442 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
PCLO-204ENST00000426442 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
PCLO-204ENST00000426442 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
PCLO-204ENST00000426442 SENP3Q9H4L4 574 aaPredicted RBP14.3□□□□□ -0.12
PCLO-204ENST00000426442 CCDC88BA6NC98 1476 aa14.15□□□□□ -0.14
PCLO-204ENST00000426442 POTEDQ86YR6 584 aa14.15□□□□□ -0.14
PCLO-204ENST00000426442 CADPSQ9ULU8 1353 aa14□□□□□ -0.17
PCLO-204ENST00000426442 CFTRP13569 1480 aa14□□□□□ -0.17
PCLO-204ENST00000426442 NESP48681 1621 aa13.98□□□□□ -0.17
PCLO-204ENST00000426442 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
PCLO-204ENST00000426442 PHF23Q9BUL5 403 aaPredicted RBP13.96□□□□□ -0.17
PCLO-204ENST00000426442 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
PCLO-204ENST00000426442 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
PCLO-204ENST00000426442 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
PCLO-204ENST00000426442 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
PCLO-204ENST00000426442 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
PCLO-204ENST00000426442 ERCC6Q03468 1493 aa13.78□□□□□ -0.2
PCLO-204ENST00000426442 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
PCLO-204ENST00000426442 MRC2Q9UBG0 1479 aa13.71□□□□□ -0.21
PCLO-204ENST00000426442 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
PCLO-204ENST00000426442 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
PCLO-204ENST00000426442 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
PCLO-204ENST00000426442 CUX1P39880 1505 aa13.68□□□□□ -0.22
PCLO-204ENST00000426442 WDR62O43379 1518 aa13.67□□□□□ -0.22
PCLO-204ENST00000426442 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
PCLO-204ENST00000426442 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
PCLO-204ENST00000426442 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
PCLO-204ENST00000426442 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
PCLO-204ENST00000426442 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
PCLO-204ENST00000426442 FGD5Q6ZNL6 1462 aa13.58□□□□□ -0.24
PCLO-204ENST00000426442 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
PCLO-204ENST00000426442 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
PCLO-204ENST00000426442 CUX2O14529 1486 aa13.54□□□□□ -0.24
PCLO-204ENST00000426442 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
PCLO-204ENST00000426442 SOGA1O94964 1423 aa13.51□□□□□ -0.25
PCLO-204ENST00000426442 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
PCLO-204ENST00000426442 TARBP1Q13395 1621 aaKnown RBP13.49□□□□□ -0.25
PCLO-204ENST00000426442 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
PCLO-204ENST00000426442 WDR97A6NE52 1622 aa13.46□□□□□ -0.25
PCLO-204ENST00000426442 FOXD1Q16676 465 aa13.42□□□□□ -0.26
PCLO-204ENST00000426442 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
PCLO-204ENST00000426442 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
PCLO-204ENST00000426442 ABCA5Q8WWZ7 1642 aa13.39□□□□□ -0.27
PCLO-204ENST00000426442 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
PCLO-204ENST00000426442 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
PCLO-204ENST00000426442 RUSC2Q8N2Y8 1516 aa13.38□□□□□ -0.27
PCLO-204ENST00000426442 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCLO-204ENST00000426442 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
PCLO-204ENST00000426442 EEA1Q15075 1411 aa13.33□□□□□ -0.28
PCLO-204ENST00000426442 GRIN2BQ13224 1484 aa13.32□□□□□ -0.28
PCLO-204ENST00000426442 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
PCLO-204ENST00000426442 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
PCLO-204ENST00000426442 IGF1RP08069 1367 aa13.29□□□□□ -0.28
PCLO-204ENST00000426442 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
PCLO-204ENST00000426442 SNAPC4Q5SXM2 1469 aa13.26□□□□□ -0.29
PCLO-204ENST00000426442 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
PCLO-204ENST00000426442 MAGI1Q96QZ7 1491 aaPredicted RBP13.25□□□□□ -0.29
PCLO-204ENST00000426442 CUL7Q14999 1698 aa13.24□□□□□ -0.29
PCLO-204ENST00000426442 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
PCLO-204ENST00000426442 CARMIL1Q5VZK9 1371 aa13.22□□□□□ -0.29
PCLO-204ENST00000426442 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
PCLO-204ENST00000426442 PRXQ9BXM0 1461 aa13.22□□□□□ -0.29
PCLO-204ENST00000426442 SYNJ2O15056 1496 aa13.19□□□□□ -0.3
PCLO-204ENST00000426442 RAPGEF2Q9Y4G8 1499 aa13.18□□□□□ -0.3
PCLO-204ENST00000426442 KIF21BO75037 1637 aa13.18□□□□□ -0.3
PCLO-204ENST00000426442 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
PCLO-204ENST00000426442 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.31
PCLO-204ENST00000426442 CHD1O14646 1710 aa13.14□□□□□ -0.31
PCLO-204ENST00000426442 FBLN2P98095 1184 aa13.13□□□□□ -0.31
PCLO-204ENST00000426442 GOLGA3Q08378 1498 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 321.5 ms