RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
SLC6A1-202ENST00000425938 CCDC180Q9P1Z9 1646 aa38.21■■■■□ 3.71
SLC6A1-202ENST00000425938 ABCC9O60706 1549 aa37.85■■■■□ 3.65
SLC6A1-202ENST00000425938 RB1CC1Q8TDY2 1594 aa36.22■■■■□ 3.39
SLC6A1-202ENST00000425938 NACADO15069 1562 aa36.06■■■■□ 3.36
SLC6A1-202ENST00000425938 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
SLC6A1-202ENST00000425938 MYO15BQ96JP2 1530 aa35.69■■■■□ 3.3
SLC6A1-202ENST00000425938 ZCCHC6Q5VYS8 1495 aaKnown RBP35.6■■■■□ 3.29
SLC6A1-202ENST00000425938 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
SLC6A1-202ENST00000425938 UNC13AQ9UPW8 1703 aa35.35■■■■□ 3.25
SLC6A1-202ENST00000425938 PABPN1Q86U42 306 aaKnown RBP eCLIP35.29■■■■□ 3.24
SLC6A1-202ENST00000425938 DNAJC5BQ9UF47 199 aa35.19■■■■□ 3.22
SLC6A1-202ENST00000425938 BICRAQ9NZM4 1560 aa35.11■■■■□ 3.21
SLC6A1-202ENST00000425938 SCRIBQ14160 1630 aa34.83■■■■□ 3.17
SLC6A1-202ENST00000425938 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
SLC6A1-202ENST00000425938 EIF4G1Q04637 1599 aaKnown RBP34.23■■■■□ 3.07
SLC6A1-202ENST00000425938 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
SLC6A1-202ENST00000425938 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
SLC6A1-202ENST00000425938 SMARCA4P51532 1647 aa33.28■■■□□ 2.92
SLC6A1-202ENST00000425938 NCAPD3P42695 1498 aa33.28■■■□□ 2.92
SLC6A1-202ENST00000425938 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
SLC6A1-202ENST00000425938 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
SLC6A1-202ENST00000425938 SMARCA2P51531 1590 aa33.16■■■□□ 2.9
SLC6A1-202ENST00000425938 HMGXB3Q12766 1538 aa33.06■■■□□ 2.88
SLC6A1-202ENST00000425938 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
SLC6A1-202ENST00000425938 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.86
SLC6A1-202ENST00000425938 BAZ1BQ9UIG0 1483 aaKnown RBP32.91■■■□□ 2.86
SLC6A1-202ENST00000425938 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
SLC6A1-202ENST00000425938 WIZO95785 1651 aa32.62■■■□□ 2.81
SLC6A1-202ENST00000425938 NESP48681 1621 aa32.6■■■□□ 2.81
SLC6A1-202ENST00000425938 CUX2O14529 1486 aa32.52■■■□□ 2.8
SLC6A1-202ENST00000425938 RSF1Q96T23 1441 aaPredicted RBP32.5■■■□□ 2.79
SLC6A1-202ENST00000425938 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
SLC6A1-202ENST00000425938 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
SLC6A1-202ENST00000425938 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
SLC6A1-202ENST00000425938 TOP2AP11388 1531 aaKnown RBP32.26■■■□□ 2.76
SLC6A1-202ENST00000425938 THOC2Q8NI27 1593 aaKnown RBP32.21■■■□□ 2.75
SLC6A1-202ENST00000425938 KIF21AQ7Z4S6 1674 aa32.2■■■□□ 2.74
SLC6A1-202ENST00000425938 DNAJC5Q9H3Z4 198 aa32.12■■■□□ 2.73
SLC6A1-202ENST00000425938 CFTRP13569 1480 aa31.98■■■□□ 2.71
SLC6A1-202ENST00000425938 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
SLC6A1-202ENST00000425938 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
SLC6A1-202ENST00000425938 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
SLC6A1-202ENST00000425938 WDR62O43379 1518 aa31.87■■■□□ 2.69
SLC6A1-202ENST00000425938 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
SLC6A1-202ENST00000425938 PRDM2Q13029 1718 aa31.76■■■□□ 2.67
SLC6A1-202ENST00000425938 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
SLC6A1-202ENST00000425938 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
SLC6A1-202ENST00000425938 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
SLC6A1-202ENST00000425938 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
SLC6A1-202ENST00000425938 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
SLC6A1-202ENST00000425938 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.59
SLC6A1-202ENST00000425938 ZNF608Q9ULD9 1512 aaPredicted RBP31.15■■■□□ 2.58
SLC6A1-202ENST00000425938 OSCARQ8IYS5 282 aa31.11■■■□□ 2.57
SLC6A1-202ENST00000425938 POLA1P09884 1462 aaPredicted RBP31.03■■■□□ 2.56
SLC6A1-202ENST00000425938 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
SLC6A1-202ENST00000425938 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
SLC6A1-202ENST00000425938 CUX1P39880 1505 aa30.95■■■□□ 2.55
SLC6A1-202ENST00000425938 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.54
SLC6A1-202ENST00000425938 SOGA1O94964 1423 aa30.91■■■□□ 2.54
SLC6A1-202ENST00000425938 FGD5Q6ZNL6 1462 aa30.9■■■□□ 2.54
SLC6A1-202ENST00000425938 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.54
SLC6A1-202ENST00000425938 TRIM41Q8WV44 630 aa30.82■■■□□ 2.52
SLC6A1-202ENST00000425938 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
SLC6A1-202ENST00000425938 WDR97A6NE52 1622 aa30.78■■■□□ 2.52
SLC6A1-202ENST00000425938 CHD1O14646 1710 aa30.7■■■□□ 2.5
SLC6A1-202ENST00000425938 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
SLC6A1-202ENST00000425938 FBLN2P98095 1184 aa30.67■■■□□ 2.5
SLC6A1-202ENST00000425938 TOP2BQ02880 1626 aa30.64■■■□□ 2.5
SLC6A1-202ENST00000425938 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
SLC6A1-202ENST00000425938 SNAPC4Q5SXM2 1469 aa30.62■■■□□ 2.49
SLC6A1-202ENST00000425938 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
SLC6A1-202ENST00000425938 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
SLC6A1-202ENST00000425938 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
SLC6A1-202ENST00000425938 GRIN2BQ13224 1484 aa30.61■■■□□ 2.49
SLC6A1-202ENST00000425938 SYNJ1O43426 1573 aa30.6■■■□□ 2.49
SLC6A1-202ENST00000425938 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
SLC6A1-202ENST00000425938 MAGI1Q96QZ7 1491 aaPredicted RBP30.58■■■□□ 2.49
SLC6A1-202ENST00000425938 ARHGEF11O15085 1522 aa30.57■■■□□ 2.48
SLC6A1-202ENST00000425938 GAPVD1Q14C86 1478 aa30.54■■■□□ 2.48
SLC6A1-202ENST00000425938 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
SLC6A1-202ENST00000425938 PBRM1Q86U86 1689 aa30.51■■■□□ 2.47
SLC6A1-202ENST00000425938 ABCA5Q8WWZ7 1642 aa30.49■■■□□ 2.47
SLC6A1-202ENST00000425938 SYNJ2O15056 1496 aa30.47■■■□□ 2.47
SLC6A1-202ENST00000425938 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
SLC6A1-202ENST00000425938 CYB5RLQ6IPT4 315 aa30.33■■■□□ 2.45
SLC6A1-202ENST00000425938 ARAP1Q96P48 1450 aa30.28■■■□□ 2.44
SLC6A1-202ENST00000425938 ERICH3Q5RHP9 1530 aa30.23■■■□□ 2.43
SLC6A1-202ENST00000425938 ADAMTS12P58397 1594 aa30.23■■■□□ 2.43
SLC6A1-202ENST00000425938 GRIN2AQ12879 1464 aa30.2■■■□□ 2.43
SLC6A1-202ENST00000425938 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
SLC6A1-202ENST00000425938 NUP160Q12769 1436 aa30.1■■■□□ 2.41
SLC6A1-202ENST00000425938 KIF27Q86VH2 1401 aa30.08■■■□□ 2.41
SLC6A1-202ENST00000425938 CEP170Q5SW79 1584 aa30.06■■■□□ 2.4
SLC6A1-202ENST00000425938 IGF1RP08069 1367 aa29.94■■■□□ 2.38
SLC6A1-202ENST00000425938 CUL7Q14999 1698 aa29.94■■■□□ 2.38
SLC6A1-202ENST00000425938 SHROOM2Q13796 1616 aa29.92■■■□□ 2.38
SLC6A1-202ENST00000425938 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
SLC6A1-202ENST00000425938 TRHP20396 242 aaPredicted RBP29.89■■■□□ 2.38
SLC6A1-202ENST00000425938 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms