RNA–Protein interactions for RNA: ENST00000425551.1

TUBA4A-204, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-204ENST00000425551 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
TUBA4A-204ENST00000425551 ABCC9O60706 1549 aa23.91■■□□□ 1.42
TUBA4A-204ENST00000425551 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
TUBA4A-204ENST00000425551 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
TUBA4A-204ENST00000425551 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.16
TUBA4A-204ENST00000425551 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
TUBA4A-204ENST00000425551 DCAF8L2P0C7V8 631 aa21.86■■□□□ 1.09
TUBA4A-204ENST00000425551 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
TUBA4A-204ENST00000425551 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
TUBA4A-204ENST00000425551 NACADO15069 1562 aa21.75■■□□□ 1.07
TUBA4A-204ENST00000425551 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
TUBA4A-204ENST00000425551 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
TUBA4A-204ENST00000425551 CC2D2AQ9P2K1 1620 aa21.45■■□□□ 1.02
TUBA4A-204ENST00000425551 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
TUBA4A-204ENST00000425551 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
TUBA4A-204ENST00000425551 SCRIBQ14160 1630 aa21■□□□□ 0.95
TUBA4A-204ENST00000425551 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
TUBA4A-204ENST00000425551 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
TUBA4A-204ENST00000425551 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
TUBA4A-204ENST00000425551 CUX2O14529 1486 aa20.62■□□□□ 0.89
TUBA4A-204ENST00000425551 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
TUBA4A-204ENST00000425551 ERCC6Q03468 1493 aa20.49■□□□□ 0.87
TUBA4A-204ENST00000425551 NESP48681 1621 aa20.42■□□□□ 0.86
TUBA4A-204ENST00000425551 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
TUBA4A-204ENST00000425551 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
TUBA4A-204ENST00000425551 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
TUBA4A-204ENST00000425551 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
TUBA4A-204ENST00000425551 KIF21AQ7Z4S6 1674 aa19.94■□□□□ 0.78
TUBA4A-204ENST00000425551 HMGXB3Q12766 1538 aa19.88■□□□□ 0.77
TUBA4A-204ENST00000425551 SMARCA4P51532 1647 aa19.85■□□□□ 0.77
TUBA4A-204ENST00000425551 BAZ1BQ9UIG0 1483 aaKnown RBP19.79■□□□□ 0.76
TUBA4A-204ENST00000425551 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
TUBA4A-204ENST00000425551 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
TUBA4A-204ENST00000425551 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
TUBA4A-204ENST00000425551 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
TUBA4A-204ENST00000425551 MRC2Q9UBG0 1479 aa19.66■□□□□ 0.74
TUBA4A-204ENST00000425551 WDR62O43379 1518 aa19.63■□□□□ 0.73
TUBA4A-204ENST00000425551 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
TUBA4A-204ENST00000425551 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
TUBA4A-204ENST00000425551 RIMBP3CA6NJZ7 1639 aa19.58■□□□□ 0.72
TUBA4A-204ENST00000425551 RIMBP3BA6NNM3 1639 aa19.58■□□□□ 0.72
TUBA4A-204ENST00000425551 RIMBP3Q9UFD9 1639 aa19.58■□□□□ 0.72
TUBA4A-204ENST00000425551 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
TUBA4A-204ENST00000425551 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
TUBA4A-204ENST00000425551 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
TUBA4A-204ENST00000425551 TRHP20396 242 aaPredicted RBP19.39■□□□□ 0.69
TUBA4A-204ENST00000425551 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
TUBA4A-204ENST00000425551 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
TUBA4A-204ENST00000425551 URB2Q14146 1524 aaKnown RBP19.39■□□□□ 0.69
TUBA4A-204ENST00000425551 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
TUBA4A-204ENST00000425551 WIZO95785 1651 aa19.32■□□□□ 0.68
TUBA4A-204ENST00000425551 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
TUBA4A-204ENST00000425551 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
TUBA4A-204ENST00000425551 CFTRP13569 1480 aa19.21■□□□□ 0.67
TUBA4A-204ENST00000425551 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.64
TUBA4A-204ENST00000425551 CHD1O14646 1710 aa19.03■□□□□ 0.64
TUBA4A-204ENST00000425551 FBLN2P98095 1184 aa19.02■□□□□ 0.64
TUBA4A-204ENST00000425551 IFT140Q96RY7 1462 aa19.02■□□□□ 0.63
TUBA4A-204ENST00000425551 EIF4G3O43432 1585 aaKnown RBP18.99■□□□□ 0.63
TUBA4A-204ENST00000425551 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
TUBA4A-204ENST00000425551 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
TUBA4A-204ENST00000425551 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
TUBA4A-204ENST00000425551 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
TUBA4A-204ENST00000425551 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.6
TUBA4A-204ENST00000425551 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
TUBA4A-204ENST00000425551 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
TUBA4A-204ENST00000425551 ILDR1Q86SU0 546 aaPredicted RBP18.79■□□□□ 0.6
TUBA4A-204ENST00000425551 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
TUBA4A-204ENST00000425551 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
TUBA4A-204ENST00000425551 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
TUBA4A-204ENST00000425551 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
TUBA4A-204ENST00000425551 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
TUBA4A-204ENST00000425551 ERCC6L2Q5T890 1561 aa18.68■□□□□ 0.58
TUBA4A-204ENST00000425551 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
TUBA4A-204ENST00000425551 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
TUBA4A-204ENST00000425551 SOGA1O94964 1423 aa18.61■□□□□ 0.57
TUBA4A-204ENST00000425551 KDM4FA0A1W2PPD8 638 aa18.6■□□□□ 0.57
TUBA4A-204ENST00000425551 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
TUBA4A-204ENST00000425551 SYNJ1O43426 1573 aa18.55■□□□□ 0.56
TUBA4A-204ENST00000425551 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
TUBA4A-204ENST00000425551 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
TUBA4A-204ENST00000425551 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
TUBA4A-204ENST00000425551 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.54
TUBA4A-204ENST00000425551 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
TUBA4A-204ENST00000425551 CUX1P39880 1505 aa18.43■□□□□ 0.54
TUBA4A-204ENST00000425551 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
TUBA4A-204ENST00000425551 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.52
TUBA4A-204ENST00000425551 PBRM1Q86U86 1689 aa18.32■□□□□ 0.52
TUBA4A-204ENST00000425551 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
TUBA4A-204ENST00000425551 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
TUBA4A-204ENST00000425551 NUP160Q12769 1436 aa18.23■□□□□ 0.51
TUBA4A-204ENST00000425551 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
TUBA4A-204ENST00000425551 ABCC10Q5T3U5 1492 aa18.21■□□□□ 0.51
TUBA4A-204ENST00000425551 SHROOM2Q13796 1616 aa18.21■□□□□ 0.51
TUBA4A-204ENST00000425551 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
TUBA4A-204ENST00000425551 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
TUBA4A-204ENST00000425551 DIP2BQ9P265 1576 aa18.15■□□□□ 0.5
TUBA4A-204ENST00000425551 TSPOAP1O95153 1857 aa18.15■□□□□ 0.5
TUBA4A-204ENST00000425551 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
TUBA4A-204ENST00000425551 KDM6BO15054 1643 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms