RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 NISCHQ9Y2I1 1504 aa24.92■■□□□ 1.58
SMIM27-201ENST00000425533 ABCC9O60706 1549 aa23.43■■□□□ 1.34
SMIM27-201ENST00000425533 CCDC180Q9P1Z9 1646 aa22.73■■□□□ 1.23
SMIM27-201ENST00000425533 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
SMIM27-201ENST00000425533 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
SMIM27-201ENST00000425533 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMIM27-201ENST00000425533 NACADO15069 1562 aa21.63■■□□□ 1.05
SMIM27-201ENST00000425533 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
SMIM27-201ENST00000425533 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
SMIM27-201ENST00000425533 DNAJC5Q9H3Z4 198 aa21.33■■□□□ 1.01
SMIM27-201ENST00000425533 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
SMIM27-201ENST00000425533 CECR2Q9BXF3 1484 aa21.19■□□□□ 0.98
SMIM27-201ENST00000425533 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
SMIM27-201ENST00000425533 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.96
SMIM27-201ENST00000425533 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
SMIM27-201ENST00000425533 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
SMIM27-201ENST00000425533 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
SMIM27-201ENST00000425533 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
SMIM27-201ENST00000425533 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
SMIM27-201ENST00000425533 CUX2O14529 1486 aa20.5■□□□□ 0.87
SMIM27-201ENST00000425533 ERCC6Q03468 1493 aa20.28■□□□□ 0.84
SMIM27-201ENST00000425533 TRIM41Q8WV44 630 aa20.09■□□□□ 0.81
SMIM27-201ENST00000425533 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
SMIM27-201ENST00000425533 NESP48681 1621 aa19.94■□□□□ 0.78
SMIM27-201ENST00000425533 THOC2Q8NI27 1593 aaKnown RBP19.91■□□□□ 0.78
SMIM27-201ENST00000425533 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
SMIM27-201ENST00000425533 HMGXB3Q12766 1538 aa19.77■□□□□ 0.76
SMIM27-201ENST00000425533 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
SMIM27-201ENST00000425533 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
SMIM27-201ENST00000425533 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
SMIM27-201ENST00000425533 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
SMIM27-201ENST00000425533 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
SMIM27-201ENST00000425533 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
SMIM27-201ENST00000425533 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
SMIM27-201ENST00000425533 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
SMIM27-201ENST00000425533 WDR62O43379 1518 aa19.44■□□□□ 0.7
SMIM27-201ENST00000425533 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
SMIM27-201ENST00000425533 OSCARQ8IYS5 282 aa19.4■□□□□ 0.7
SMIM27-201ENST00000425533 RIMBP3CA6NJZ7 1639 aa19.31■□□□□ 0.68
SMIM27-201ENST00000425533 RIMBP3BA6NNM3 1639 aa19.31■□□□□ 0.68
SMIM27-201ENST00000425533 RIMBP3Q9UFD9 1639 aa19.31■□□□□ 0.68
SMIM27-201ENST00000425533 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
SMIM27-201ENST00000425533 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
SMIM27-201ENST00000425533 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
SMIM27-201ENST00000425533 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
SMIM27-201ENST00000425533 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
SMIM27-201ENST00000425533 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
SMIM27-201ENST00000425533 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
SMIM27-201ENST00000425533 URB2Q14146 1524 aaKnown RBP19.03■□□□□ 0.64
SMIM27-201ENST00000425533 CYB5RLQ6IPT4 315 aa19.01■□□□□ 0.63
SMIM27-201ENST00000425533 WIZO95785 1651 aa18.97■□□□□ 0.63
SMIM27-201ENST00000425533 CFTRP13569 1480 aa18.96■□□□□ 0.63
SMIM27-201ENST00000425533 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
SMIM27-201ENST00000425533 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
SMIM27-201ENST00000425533 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
SMIM27-201ENST00000425533 CHD1O14646 1710 aa18.82■□□□□ 0.6
SMIM27-201ENST00000425533 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
SMIM27-201ENST00000425533 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
SMIM27-201ENST00000425533 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
SMIM27-201ENST00000425533 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
SMIM27-201ENST00000425533 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
SMIM27-201ENST00000425533 FBLN2P98095 1184 aa18.63■□□□□ 0.57
SMIM27-201ENST00000425533 AQRO60306 1485 aaKnown RBP eCLIP18.63■□□□□ 0.57
SMIM27-201ENST00000425533 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
SMIM27-201ENST00000425533 ABCC8Q09428 1581 aa18.56■□□□□ 0.56
SMIM27-201ENST00000425533 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
SMIM27-201ENST00000425533 CLASP1Q7Z460 1538 aa18.55■□□□□ 0.56
SMIM27-201ENST00000425533 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
SMIM27-201ENST00000425533 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
SMIM27-201ENST00000425533 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
SMIM27-201ENST00000425533 SNAPC4Q5SXM2 1469 aa18.43■□□□□ 0.54
SMIM27-201ENST00000425533 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
SMIM27-201ENST00000425533 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.53
SMIM27-201ENST00000425533 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
SMIM27-201ENST00000425533 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
SMIM27-201ENST00000425533 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
SMIM27-201ENST00000425533 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.53
SMIM27-201ENST00000425533 WDR97A6NE52 1622 aa18.33■□□□□ 0.52
SMIM27-201ENST00000425533 SOGA1O94964 1423 aa18.32■□□□□ 0.52
SMIM27-201ENST00000425533 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
SMIM27-201ENST00000425533 KIF13AQ9H1H9 1805 aa18.26■□□□□ 0.51
SMIM27-201ENST00000425533 GRIN2BQ13224 1484 aa18.25■□□□□ 0.51
SMIM27-201ENST00000425533 ERCC6L2Q5T890 1561 aa18.22■□□□□ 0.51
SMIM27-201ENST00000425533 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
SMIM27-201ENST00000425533 PBRM1Q86U86 1689 aa18.2■□□□□ 0.5
SMIM27-201ENST00000425533 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
SMIM27-201ENST00000425533 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
SMIM27-201ENST00000425533 CUX1P39880 1505 aa18.09■□□□□ 0.49
SMIM27-201ENST00000425533 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
SMIM27-201ENST00000425533 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
SMIM27-201ENST00000425533 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
SMIM27-201ENST00000425533 KDM6BO15054 1643 aa18■□□□□ 0.47
SMIM27-201ENST00000425533 NUP160Q12769 1436 aa17.99■□□□□ 0.47
SMIM27-201ENST00000425533 ABCC10Q5T3U5 1492 aa17.99■□□□□ 0.47
SMIM27-201ENST00000425533 FAM69CQ0P6D2 419 aa17.98■□□□□ 0.47
SMIM27-201ENST00000425533 DIP2BQ9P265 1576 aa17.96■□□□□ 0.47
SMIM27-201ENST00000425533 ABCA10Q8WWZ4 1543 aa17.95■□□□□ 0.46
SMIM27-201ENST00000425533 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
SMIM27-201ENST00000425533 MAPKBP1O60336 1514 aa17.92■□□□□ 0.46
SMIM27-201ENST00000425533 TSPOAP1O95153 1857 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms