RNA–Protein interactions for RNA: ENST00000425483.1

LINC00454-201, long intergenic non-protein coding RNA 454, humanhuman

TSL 3 BASIC

Gene LINC00454, Length 503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-201ENST00000425483 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
LINC00454-201ENST00000425483 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
LINC00454-201ENST00000425483 ABCC9O60706 1549 aa24.88■■□□□ 1.57
LINC00454-201ENST00000425483 RB1CC1Q8TDY2 1594 aa23.8■■□□□ 1.4
LINC00454-201ENST00000425483 NACADO15069 1562 aa23.72■■□□□ 1.39
LINC00454-201ENST00000425483 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
LINC00454-201ENST00000425483 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
LINC00454-201ENST00000425483 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
LINC00454-201ENST00000425483 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
LINC00454-201ENST00000425483 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
LINC00454-201ENST00000425483 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
LINC00454-201ENST00000425483 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
LINC00454-201ENST00000425483 DNAJC5BQ9UF47 199 aa23.06■■□□□ 1.28
LINC00454-201ENST00000425483 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
LINC00454-201ENST00000425483 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
LINC00454-201ENST00000425483 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
LINC00454-201ENST00000425483 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
LINC00454-201ENST00000425483 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
LINC00454-201ENST00000425483 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
LINC00454-201ENST00000425483 SMARCA4P51532 1647 aa21.89■■□□□ 1.09
LINC00454-201ENST00000425483 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
LINC00454-201ENST00000425483 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
LINC00454-201ENST00000425483 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
LINC00454-201ENST00000425483 HMGXB3Q12766 1538 aa21.76■■□□□ 1.07
LINC00454-201ENST00000425483 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
LINC00454-201ENST00000425483 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
LINC00454-201ENST00000425483 PEG3Q9GZU2 1588 aa21.69■■□□□ 1.06
LINC00454-201ENST00000425483 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
LINC00454-201ENST00000425483 NESP48681 1621 aa21.44■■□□□ 1.02
LINC00454-201ENST00000425483 WIZO95785 1651 aa21.4■■□□□ 1.02
LINC00454-201ENST00000425483 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
LINC00454-201ENST00000425483 CUX2O14529 1486 aa21.35■■□□□ 1.01
LINC00454-201ENST00000425483 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
LINC00454-201ENST00000425483 CADPSQ9ULU8 1353 aa21.27■■□□□ 1
LINC00454-201ENST00000425483 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
LINC00454-201ENST00000425483 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
LINC00454-201ENST00000425483 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
LINC00454-201ENST00000425483 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
LINC00454-201ENST00000425483 CFTRP13569 1480 aa21.08■□□□□ 0.97
LINC00454-201ENST00000425483 MRC2Q9UBG0 1479 aa21.04■□□□□ 0.96
LINC00454-201ENST00000425483 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
LINC00454-201ENST00000425483 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
LINC00454-201ENST00000425483 DNAJC5Q9H3Z4 198 aa21■□□□□ 0.95
LINC00454-201ENST00000425483 CCDC88BA6NC98 1476 aa20.97■□□□□ 0.95
LINC00454-201ENST00000425483 WDR62O43379 1518 aa20.96■□□□□ 0.95
LINC00454-201ENST00000425483 URB2Q14146 1524 aaKnown RBP20.8■□□□□ 0.92
LINC00454-201ENST00000425483 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
LINC00454-201ENST00000425483 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
LINC00454-201ENST00000425483 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
LINC00454-201ENST00000425483 TOPBP1Q92547 1522 aa20.63■□□□□ 0.89
LINC00454-201ENST00000425483 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
LINC00454-201ENST00000425483 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
LINC00454-201ENST00000425483 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
LINC00454-201ENST00000425483 POLA1P09884 1462 aaPredicted RBP20.46■□□□□ 0.87
LINC00454-201ENST00000425483 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
LINC00454-201ENST00000425483 TARBP1Q13395 1621 aaKnown RBP20.39■□□□□ 0.86
LINC00454-201ENST00000425483 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
LINC00454-201ENST00000425483 SOGA1O94964 1423 aa20.37■□□□□ 0.85
LINC00454-201ENST00000425483 CUX1P39880 1505 aa20.37■□□□□ 0.85
LINC00454-201ENST00000425483 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
LINC00454-201ENST00000425483 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
LINC00454-201ENST00000425483 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
LINC00454-201ENST00000425483 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
LINC00454-201ENST00000425483 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
LINC00454-201ENST00000425483 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
LINC00454-201ENST00000425483 FBLN2P98095 1184 aa20.2■□□□□ 0.82
LINC00454-201ENST00000425483 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
LINC00454-201ENST00000425483 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
LINC00454-201ENST00000425483 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
LINC00454-201ENST00000425483 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
LINC00454-201ENST00000425483 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
LINC00454-201ENST00000425483 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
LINC00454-201ENST00000425483 TOP2BQ02880 1626 aa20.12■□□□□ 0.81
LINC00454-201ENST00000425483 CHD1O14646 1710 aa20.11■□□□□ 0.81
LINC00454-201ENST00000425483 CHMP7Q8WUX9 453 aaPredicted RBP20.11■□□□□ 0.81
LINC00454-201ENST00000425483 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
LINC00454-201ENST00000425483 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
LINC00454-201ENST00000425483 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
LINC00454-201ENST00000425483 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
LINC00454-201ENST00000425483 RIMBP3CA6NJZ7 1639 aa20.06■□□□□ 0.8
LINC00454-201ENST00000425483 RIMBP3BA6NNM3 1639 aa20.06■□□□□ 0.8
LINC00454-201ENST00000425483 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
LINC00454-201ENST00000425483 RIMBP3Q9UFD9 1639 aa20.06■□□□□ 0.8
LINC00454-201ENST00000425483 PBRM1Q86U86 1689 aa20■□□□□ 0.79
LINC00454-201ENST00000425483 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
LINC00454-201ENST00000425483 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
LINC00454-201ENST00000425483 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
LINC00454-201ENST00000425483 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
LINC00454-201ENST00000425483 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
LINC00454-201ENST00000425483 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
LINC00454-201ENST00000425483 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
LINC00454-201ENST00000425483 NUP160Q12769 1436 aa19.83■□□□□ 0.76
LINC00454-201ENST00000425483 KIF27Q86VH2 1401 aa19.79■□□□□ 0.76
LINC00454-201ENST00000425483 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
LINC00454-201ENST00000425483 IGF1RP08069 1367 aa19.73■□□□□ 0.75
LINC00454-201ENST00000425483 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
LINC00454-201ENST00000425483 SHROOM2Q13796 1616 aa19.65■□□□□ 0.74
LINC00454-201ENST00000425483 JPH4Q96JJ6 628 aa19.64■□□□□ 0.73
LINC00454-201ENST00000425483 CUL7Q14999 1698 aa19.64■□□□□ 0.73
LINC00454-201ENST00000425483 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms