RNA–Protein interactions for RNA: ENST00000425459.5

GPD1L-202, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

TSL 4

Gene GPD1L, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-202ENST00000425459 NISCHQ9Y2I1 1504 aa39.71■■■■□ 3.95
GPD1L-202ENST00000425459 CCDC180Q9P1Z9 1646 aa35.67■■■■□ 3.3
GPD1L-202ENST00000425459 ABCC9O60706 1549 aa35.6■■■■□ 3.29
GPD1L-202ENST00000425459 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
GPD1L-202ENST00000425459 NACADO15069 1562 aa33.7■■■□□ 2.99
GPD1L-202ENST00000425459 DCAF8L2P0C7V8 631 aa33.49■■■□□ 2.95
GPD1L-202ENST00000425459 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
GPD1L-202ENST00000425459 MYO15BQ96JP2 1530 aa33.23■■■□□ 2.91
GPD1L-202ENST00000425459 UNC13AQ9UPW8 1703 aa33.12■■■□□ 2.89
GPD1L-202ENST00000425459 PABPN1Q86U42 306 aaKnown RBP eCLIP33.1■■■□□ 2.89
GPD1L-202ENST00000425459 ZCCHC6Q5VYS8 1495 aaKnown RBP32.95■■■□□ 2.87
GPD1L-202ENST00000425459 BICRAQ9NZM4 1560 aa32.88■■■□□ 2.85
GPD1L-202ENST00000425459 DCAF1Q9Y4B6 1507 aa32.82■■■□□ 2.85
GPD1L-202ENST00000425459 SHROOM4Q9ULL8 1493 aa32.54■■■□□ 2.8
GPD1L-202ENST00000425459 SCRIBQ14160 1630 aa32.51■■■□□ 2.79
GPD1L-202ENST00000425459 CC2D2AQ9P2K1 1620 aa32.17■■■□□ 2.74
GPD1L-202ENST00000425459 EIF4G1Q04637 1599 aaKnown RBP32.11■■■□□ 2.73
GPD1L-202ENST00000425459 CECR2Q9BXF3 1484 aa32.08■■■□□ 2.73
GPD1L-202ENST00000425459 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
GPD1L-202ENST00000425459 SMARCA4P51532 1647 aa31■■■□□ 2.55
GPD1L-202ENST00000425459 ATAD2BQ9ULI0 1458 aa31■■■□□ 2.55
GPD1L-202ENST00000425459 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
GPD1L-202ENST00000425459 HMGXB3Q12766 1538 aa30.9■■■□□ 2.54
GPD1L-202ENST00000425459 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
GPD1L-202ENST00000425459 ERCC6Q03468 1493 aa30.79■■■□□ 2.52
GPD1L-202ENST00000425459 BAZ1BQ9UIG0 1483 aaKnown RBP30.74■■■□□ 2.51
GPD1L-202ENST00000425459 CUX2O14529 1486 aa30.7■■■□□ 2.5
GPD1L-202ENST00000425459 PEG3Q9GZU2 1588 aa30.69■■■□□ 2.5
GPD1L-202ENST00000425459 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
GPD1L-202ENST00000425459 NESP48681 1621 aa30.57■■■□□ 2.48
GPD1L-202ENST00000425459 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
GPD1L-202ENST00000425459 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
GPD1L-202ENST00000425459 THOC2Q8NI27 1593 aaKnown RBP30.3■■■□□ 2.44
GPD1L-202ENST00000425459 WIZO95785 1651 aa30.23■■■□□ 2.43
GPD1L-202ENST00000425459 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
GPD1L-202ENST00000425459 KIF21AQ7Z4S6 1674 aa30.21■■■□□ 2.43
GPD1L-202ENST00000425459 CADPSQ9ULU8 1353 aa30.14■■■□□ 2.41
GPD1L-202ENST00000425459 MRC2Q9UBG0 1479 aa29.98■■■□□ 2.39
GPD1L-202ENST00000425459 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
GPD1L-202ENST00000425459 WDR62O43379 1518 aa29.91■■■□□ 2.38
GPD1L-202ENST00000425459 TOP2AP11388 1531 aaKnown RBP29.9■■■□□ 2.38
GPD1L-202ENST00000425459 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
GPD1L-202ENST00000425459 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
GPD1L-202ENST00000425459 CFTRP13569 1480 aa29.8■■■□□ 2.36
GPD1L-202ENST00000425459 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
GPD1L-202ENST00000425459 URB2Q14146 1524 aaKnown RBP29.55■■■□□ 2.32
GPD1L-202ENST00000425459 CCDC88BA6NC98 1476 aa29.5■■■□□ 2.31
GPD1L-202ENST00000425459 TRIM41Q8WV44 630 aa29.28■■■□□ 2.28
GPD1L-202ENST00000425459 IFT140Q96RY7 1462 aa29.26■■■□□ 2.27
GPD1L-202ENST00000425459 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
GPD1L-202ENST00000425459 OSCARQ8IYS5 282 aa29.24■■■□□ 2.27
GPD1L-202ENST00000425459 ABCC8Q09428 1581 aa29.21■■■□□ 2.27
GPD1L-202ENST00000425459 ZNF608Q9ULD9 1512 aaPredicted RBP29.18■■■□□ 2.26
GPD1L-202ENST00000425459 DNMBPQ6XZF7 1577 aa29.18■■■□□ 2.26
GPD1L-202ENST00000425459 EIF4G3O43432 1585 aaKnown RBP29.07■■■□□ 2.24
GPD1L-202ENST00000425459 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
GPD1L-202ENST00000425459 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
GPD1L-202ENST00000425459 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.22
GPD1L-202ENST00000425459 RIMBP3CA6NJZ7 1639 aa28.9■■■□□ 2.22
GPD1L-202ENST00000425459 RIMBP3BA6NNM3 1639 aa28.9■■■□□ 2.22
GPD1L-202ENST00000425459 RIMBP3Q9UFD9 1639 aa28.9■■■□□ 2.22
GPD1L-202ENST00000425459 RAD54L2Q9Y4B4 1467 aa28.83■■■□□ 2.21
GPD1L-202ENST00000425459 CHD1O14646 1710 aa28.83■■■□□ 2.21
GPD1L-202ENST00000425459 ARHGEF11O15085 1522 aa28.82■■■□□ 2.2
GPD1L-202ENST00000425459 SOGA1O94964 1423 aa28.81■■■□□ 2.2
GPD1L-202ENST00000425459 FGD5Q6ZNL6 1462 aa28.79■■■□□ 2.2
GPD1L-202ENST00000425459 CUX1P39880 1505 aa28.75■■■□□ 2.19
GPD1L-202ENST00000425459 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
GPD1L-202ENST00000425459 FBLN2P98095 1184 aa28.74■■■□□ 2.19
GPD1L-202ENST00000425459 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
GPD1L-202ENST00000425459 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
GPD1L-202ENST00000425459 SNAPC4Q5SXM2 1469 aa28.66■■■□□ 2.18
GPD1L-202ENST00000425459 MAGI1Q96QZ7 1491 aaPredicted RBP28.6■■■□□ 2.17
GPD1L-202ENST00000425459 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
GPD1L-202ENST00000425459 CYB5RLQ6IPT4 315 aa28.56■■■□□ 2.16
GPD1L-202ENST00000425459 CHMP7Q8WUX9 453 aaPredicted RBP28.53■■■□□ 2.16
GPD1L-202ENST00000425459 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
GPD1L-202ENST00000425459 SYNJ1O43426 1573 aa28.52■■■□□ 2.16
GPD1L-202ENST00000425459 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
GPD1L-202ENST00000425459 PBRM1Q86U86 1689 aa28.49■■■□□ 2.15
GPD1L-202ENST00000425459 SYNJ2O15056 1496 aa28.49■■■□□ 2.15
GPD1L-202ENST00000425459 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
GPD1L-202ENST00000425459 ABCA10Q8WWZ4 1543 aa28.47■■■□□ 2.15
GPD1L-202ENST00000425459 ABCA5Q8WWZ7 1642 aa28.43■■■□□ 2.14
GPD1L-202ENST00000425459 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
GPD1L-202ENST00000425459 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
GPD1L-202ENST00000425459 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
GPD1L-202ENST00000425459 TRHP20396 242 aaPredicted RBP28.26■■■□□ 2.11
GPD1L-202ENST00000425459 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
GPD1L-202ENST00000425459 GRIN2AQ12879 1464 aa28.22■■■□□ 2.11
GPD1L-202ENST00000425459 FHAD1B1AJZ9 1412 aa28.12■■■□□ 2.09
GPD1L-202ENST00000425459 ERICH3Q5RHP9 1530 aa28.12■■■□□ 2.09
GPD1L-202ENST00000425459 NUP160Q12769 1436 aa28.11■■■□□ 2.09
GPD1L-202ENST00000425459 CEP170Q5SW79 1584 aa28.11■■■□□ 2.09
GPD1L-202ENST00000425459 ERCC6L2Q5T890 1561 aa28.02■■■□□ 2.08
GPD1L-202ENST00000425459 SHROOM2Q13796 1616 aa27.99■■■□□ 2.07
GPD1L-202ENST00000425459 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
GPD1L-202ENST00000425459 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
GPD1L-202ENST00000425459 KIF27Q86VH2 1401 aa27.78■■■□□ 2.04
GPD1L-202ENST00000425459 JPH4Q96JJ6 628 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms