RNA–Protein interactions for RNA: ENST00000425206.5

PSMC2-202, Transcript of proteasome 26S subunit, ATPase 2, humanhuman

TSL 3

Gene PSMC2, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC2-202ENST00000425206 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
PSMC2-202ENST00000425206 ABCC9O60706 1549 aa22.42■■□□□ 1.18
PSMC2-202ENST00000425206 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
PSMC2-202ENST00000425206 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
PSMC2-202ENST00000425206 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
PSMC2-202ENST00000425206 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
PSMC2-202ENST00000425206 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
PSMC2-202ENST00000425206 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
PSMC2-202ENST00000425206 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
PSMC2-202ENST00000425206 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
PSMC2-202ENST00000425206 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
PSMC2-202ENST00000425206 NACADO15069 1562 aa20.24■□□□□ 0.83
PSMC2-202ENST00000425206 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
PSMC2-202ENST00000425206 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
PSMC2-202ENST00000425206 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
PSMC2-202ENST00000425206 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
PSMC2-202ENST00000425206 CUX2O14529 1486 aa19.87■□□□□ 0.77
PSMC2-202ENST00000425206 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
PSMC2-202ENST00000425206 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
PSMC2-202ENST00000425206 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
PSMC2-202ENST00000425206 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
PSMC2-202ENST00000425206 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
PSMC2-202ENST00000425206 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
PSMC2-202ENST00000425206 NESP48681 1621 aa18.87■□□□□ 0.61
PSMC2-202ENST00000425206 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
PSMC2-202ENST00000425206 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
PSMC2-202ENST00000425206 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
PSMC2-202ENST00000425206 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
PSMC2-202ENST00000425206 TRHP20396 242 aaPredicted RBP18.7■□□□□ 0.58
PSMC2-202ENST00000425206 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
PSMC2-202ENST00000425206 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
PSMC2-202ENST00000425206 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
PSMC2-202ENST00000425206 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
PSMC2-202ENST00000425206 ILDR1Q86SU0 546 aaPredicted RBP18.65■□□□□ 0.58
PSMC2-202ENST00000425206 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
PSMC2-202ENST00000425206 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
PSMC2-202ENST00000425206 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
PSMC2-202ENST00000425206 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
PSMC2-202ENST00000425206 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
PSMC2-202ENST00000425206 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
PSMC2-202ENST00000425206 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
PSMC2-202ENST00000425206 HMGXB3Q12766 1538 aa18.41■□□□□ 0.54
PSMC2-202ENST00000425206 WDR62O43379 1518 aa18.35■□□□□ 0.53
PSMC2-202ENST00000425206 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
PSMC2-202ENST00000425206 BAZ1BQ9UIG0 1483 aaKnown RBP18.19■□□□□ 0.5
PSMC2-202ENST00000425206 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
PSMC2-202ENST00000425206 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
PSMC2-202ENST00000425206 SMARCA4P51532 1647 aa18.08■□□□□ 0.48
PSMC2-202ENST00000425206 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
PSMC2-202ENST00000425206 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
PSMC2-202ENST00000425206 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
PSMC2-202ENST00000425206 PEG3Q9GZU2 1588 aa17.91■□□□□ 0.46
PSMC2-202ENST00000425206 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
PSMC2-202ENST00000425206 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
PSMC2-202ENST00000425206 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
PSMC2-202ENST00000425206 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
PSMC2-202ENST00000425206 CHD1O14646 1710 aa17.81■□□□□ 0.44
PSMC2-202ENST00000425206 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
PSMC2-202ENST00000425206 IFT140Q96RY7 1462 aa17.69■□□□□ 0.42
PSMC2-202ENST00000425206 FBLN2P98095 1184 aa17.69■□□□□ 0.42
PSMC2-202ENST00000425206 FBXO41Q8TF61 875 aa17.64■□□□□ 0.41
PSMC2-202ENST00000425206 EIF4G3O43432 1585 aaKnown RBP17.64■□□□□ 0.41
PSMC2-202ENST00000425206 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
PSMC2-202ENST00000425206 ERCC6L2Q5T890 1561 aa17.59■□□□□ 0.41
PSMC2-202ENST00000425206 CFTRP13569 1480 aa17.56■□□□□ 0.4
PSMC2-202ENST00000425206 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
PSMC2-202ENST00000425206 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
PSMC2-202ENST00000425206 SOCS7O14512 581 aa17.53■□□□□ 0.4
PSMC2-202ENST00000425206 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.392e-6■■■■■ 27.1
PSMC2-202ENST00000425206 KIF13AQ9H1H9 1805 aa17.5■□□□□ 0.39
PSMC2-202ENST00000425206 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
PSMC2-202ENST00000425206 HECW2Q9P2P5 1572 aa17.47■□□□□ 0.39
PSMC2-202ENST00000425206 ILDR2Q71H61 639 aa17.41■□□□□ 0.38
PSMC2-202ENST00000425206 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
PSMC2-202ENST00000425206 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
PSMC2-202ENST00000425206 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
PSMC2-202ENST00000425206 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
PSMC2-202ENST00000425206 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
PSMC2-202ENST00000425206 WIZO95785 1651 aa17.3■□□□□ 0.36
PSMC2-202ENST00000425206 KDM6BO15054 1643 aa17.29■□□□□ 0.36
PSMC2-202ENST00000425206 SYNJ2O15056 1496 aa17.27■□□□□ 0.36
PSMC2-202ENST00000425206 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
PSMC2-202ENST00000425206 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
PSMC2-202ENST00000425206 ABCC8Q09428 1581 aa17.24■□□□□ 0.35
PSMC2-202ENST00000425206 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
PSMC2-202ENST00000425206 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
PSMC2-202ENST00000425206 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
PSMC2-202ENST00000425206 TDRD9Q8NDG6 1382 aaKnown RBP17.17■□□□□ 0.34
PSMC2-202ENST00000425206 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
PSMC2-202ENST00000425206 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
PSMC2-202ENST00000425206 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
PSMC2-202ENST00000425206 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
PSMC2-202ENST00000425206 RAD54L2Q9Y4B4 1467 aa17.08■□□□□ 0.32
PSMC2-202ENST00000425206 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
PSMC2-202ENST00000425206 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
PSMC2-202ENST00000425206 SOGA1O94964 1423 aa17.02■□□□□ 0.31
PSMC2-202ENST00000425206 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
PSMC2-202ENST00000425206 CEP170Q5SW79 1584 aa17■□□□□ 0.31
PSMC2-202ENST00000425206 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
PSMC2-202ENST00000425206 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms