RNA–Protein interactions for RNA: ENST00000424965.5

SHISA5-205, Transcript of shisa family member 5, humanhuman

TSL 5

Gene SHISA5, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-205ENST00000424965 NISCHQ9Y2I1 1504 aa41.12■■■■■ 4.17
SHISA5-205ENST00000424965 CCDC180Q9P1Z9 1646 aa36.83■■■■□ 3.49
SHISA5-205ENST00000424965 ABCC9O60706 1549 aa36.58■■■■□ 3.45
SHISA5-205ENST00000424965 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
SHISA5-205ENST00000424965 NACADO15069 1562 aa34.77■■■■□ 3.16
SHISA5-205ENST00000424965 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
SHISA5-205ENST00000424965 MYO15BQ96JP2 1530 aa34.35■■■■□ 3.09
SHISA5-205ENST00000424965 UNC13AQ9UPW8 1703 aa34.15■■■■□ 3.06
SHISA5-205ENST00000424965 ZCCHC6Q5VYS8 1495 aaKnown RBP34.11■■■■□ 3.05
SHISA5-205ENST00000424965 PABPN1Q86U42 306 aaKnown RBP eCLIP34.09■■■■□ 3.05
SHISA5-205ENST00000424965 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
SHISA5-205ENST00000424965 DCAF1Q9Y4B6 1507 aa33.99■■■■□ 3.03
SHISA5-205ENST00000424965 BICRAQ9NZM4 1560 aa33.85■■■■□ 3.01
SHISA5-205ENST00000424965 SCRIBQ14160 1630 aa33.56■■■□□ 2.96
SHISA5-205ENST00000424965 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
SHISA5-205ENST00000424965 CC2D2AQ9P2K1 1620 aa33.07■■■□□ 2.88
SHISA5-205ENST00000424965 EIF4G1Q04637 1599 aaKnown RBP33.04■■■□□ 2.88
SHISA5-205ENST00000424965 CECR2Q9BXF3 1484 aa32.94■■■□□ 2.86
SHISA5-205ENST00000424965 NCAPD3P42695 1498 aa32.07■■■□□ 2.72
SHISA5-205ENST00000424965 SMARCA4P51532 1647 aa32.04■■■□□ 2.72
SHISA5-205ENST00000424965 ATAD2BQ9ULI0 1458 aa31.99■■■□□ 2.71
SHISA5-205ENST00000424965 SMARCA2P51531 1590 aa31.96■■■□□ 2.71
SHISA5-205ENST00000424965 BAZ1AQ9NRL2 1556 aaPredicted RBP31.94■■■□□ 2.7
SHISA5-205ENST00000424965 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
SHISA5-205ENST00000424965 BAZ1BQ9UIG0 1483 aaKnown RBP31.73■■■□□ 2.67
SHISA5-205ENST00000424965 PEG3Q9GZU2 1588 aa31.72■■■□□ 2.67
SHISA5-205ENST00000424965 MROH2BQ7Z745 1585 aa31.66■■■□□ 2.66
SHISA5-205ENST00000424965 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
SHISA5-205ENST00000424965 NESP48681 1621 aa31.46■■■□□ 2.63
SHISA5-205ENST00000424965 CUX2O14529 1486 aa31.46■■■□□ 2.63
SHISA5-205ENST00000424965 LAMC3Q9Y6N6 1575 aa31.34■■■□□ 2.61
SHISA5-205ENST00000424965 WIZO95785 1651 aa31.32■■■□□ 2.6
SHISA5-205ENST00000424965 DNAJC5Q9H3Z4 198 aa31.17■■■□□ 2.58
SHISA5-205ENST00000424965 PDS5BQ9NTI5 1447 aa31.16■■■□□ 2.58
SHISA5-205ENST00000424965 CADPSQ9ULU8 1353 aa31.12■■■□□ 2.57
SHISA5-205ENST00000424965 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
SHISA5-205ENST00000424965 THOC2Q8NI27 1593 aaKnown RBP31.11■■■□□ 2.57
SHISA5-205ENST00000424965 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
SHISA5-205ENST00000424965 TOP2AP11388 1531 aaKnown RBP30.94■■■□□ 2.54
SHISA5-205ENST00000424965 MRC2Q9UBG0 1479 aa30.85■■■□□ 2.53
SHISA5-205ENST00000424965 CFTRP13569 1480 aa30.79■■■□□ 2.52
SHISA5-205ENST00000424965 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
SHISA5-205ENST00000424965 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
SHISA5-205ENST00000424965 WDR62O43379 1518 aa30.76■■■□□ 2.51
SHISA5-205ENST00000424965 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
SHISA5-205ENST00000424965 PRDM2Q13029 1718 aa30.56■■■□□ 2.48
SHISA5-205ENST00000424965 URB2Q14146 1524 aaKnown RBP30.46■■■□□ 2.47
SHISA5-205ENST00000424965 ABCC8Q09428 1581 aa30.2■■■□□ 2.43
SHISA5-205ENST00000424965 TOPBP1Q92547 1522 aa30.2■■■□□ 2.42
SHISA5-205ENST00000424965 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
SHISA5-205ENST00000424965 DNMBPQ6XZF7 1577 aa30.12■■■□□ 2.41
SHISA5-205ENST00000424965 OSCARQ8IYS5 282 aa30.1■■■□□ 2.41
SHISA5-205ENST00000424965 ZNF608Q9ULD9 1512 aaPredicted RBP30.05■■■□□ 2.4
SHISA5-205ENST00000424965 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
SHISA5-205ENST00000424965 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
SHISA5-205ENST00000424965 EIF4G3O43432 1585 aaKnown RBP29.93■■■□□ 2.38
SHISA5-205ENST00000424965 TARBP1Q13395 1621 aaKnown RBP29.9■■■□□ 2.38
SHISA5-205ENST00000424965 POLA1P09884 1462 aaPredicted RBP29.89■■■□□ 2.38
SHISA5-205ENST00000424965 AQRO60306 1485 aaKnown RBP eCLIP29.83■■■□□ 2.37
SHISA5-205ENST00000424965 SOGA1O94964 1423 aa29.79■■■□□ 2.36
SHISA5-205ENST00000424965 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
SHISA5-205ENST00000424965 FGD5Q6ZNL6 1462 aa29.75■■■□□ 2.35
SHISA5-205ENST00000424965 CUX1P39880 1505 aa29.74■■■□□ 2.35
SHISA5-205ENST00000424965 TDRD9Q8NDG6 1382 aaKnown RBP29.68■■■□□ 2.34
SHISA5-205ENST00000424965 CHD1O14646 1710 aa29.68■■■□□ 2.34
SHISA5-205ENST00000424965 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
SHISA5-205ENST00000424965 FBLN2P98095 1184 aa29.65■■■□□ 2.34
SHISA5-205ENST00000424965 RIMBP3CA6NJZ7 1639 aa29.63■■■□□ 2.33
SHISA5-205ENST00000424965 RIMBP3BA6NNM3 1639 aa29.63■■■□□ 2.33
SHISA5-205ENST00000424965 RIMBP3Q9UFD9 1639 aa29.63■■■□□ 2.33
SHISA5-205ENST00000424965 ARHGEF11O15085 1522 aa29.56■■■□□ 2.32
SHISA5-205ENST00000424965 SNAPC4Q5SXM2 1469 aa29.53■■■□□ 2.32
SHISA5-205ENST00000424965 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
SHISA5-205ENST00000424965 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
SHISA5-205ENST00000424965 CHMP7Q8WUX9 453 aaPredicted RBP29.46■■■□□ 2.31
SHISA5-205ENST00000424965 GAPVD1Q14C86 1478 aa29.43■■■□□ 2.3
SHISA5-205ENST00000424965 ABCA10Q8WWZ4 1543 aa29.43■■■□□ 2.3
SHISA5-205ENST00000424965 PBRM1Q86U86 1689 aa29.42■■■□□ 2.3
SHISA5-205ENST00000424965 WRNQ14191 1432 aaPredicted RBP eCLIP29.38■■■□□ 2.29
SHISA5-205ENST00000424965 SYNJ2O15056 1496 aa29.38■■■□□ 2.29
SHISA5-205ENST00000424965 SYNJ1O43426 1573 aa29.37■■■□□ 2.29
SHISA5-205ENST00000424965 ABCA5Q8WWZ7 1642 aa29.36■■■□□ 2.29
SHISA5-205ENST00000424965 BIVM-ERCC5R4GMW8 1640 aa29.36■■■□□ 2.29
SHISA5-205ENST00000424965 CYB5RLQ6IPT4 315 aa29.36■■■□□ 2.29
SHISA5-205ENST00000424965 TOP2BQ02880 1626 aa29.35■■■□□ 2.29
SHISA5-205ENST00000424965 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
SHISA5-205ENST00000424965 ARAP1Q96P48 1450 aa29.25■■■□□ 2.27
SHISA5-205ENST00000424965 GRIN2AQ12879 1464 aa29.12■■■□□ 2.25
SHISA5-205ENST00000424965 ADAMTS12P58397 1594 aa29.12■■■□□ 2.25
SHISA5-205ENST00000424965 ERICH3Q5RHP9 1530 aa29.08■■■□□ 2.25
SHISA5-205ENST00000424965 FHAD1B1AJZ9 1412 aa29.07■■■□□ 2.24
SHISA5-205ENST00000424965 TRHP20396 242 aaPredicted RBP28.99■■■□□ 2.23
SHISA5-205ENST00000424965 NUP160Q12769 1436 aa28.99■■■□□ 2.23
SHISA5-205ENST00000424965 CEP170Q5SW79 1584 aa28.98■■■□□ 2.23
SHISA5-205ENST00000424965 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
SHISA5-205ENST00000424965 ERCC6L2Q5T890 1561 aa28.84■■■□□ 2.21
SHISA5-205ENST00000424965 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
SHISA5-205ENST00000424965 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
SHISA5-205ENST00000424965 IGF1RP08069 1367 aa28.74■■■□□ 2.19
SHISA5-205ENST00000424965 CUL7Q14999 1698 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms