RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
SCN2A-204ENST00000424833 CCDC180Q9P1Z9 1646 aa15.71■□□□□ 0.11
SCN2A-204ENST00000424833 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
SCN2A-204ENST00000424833 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
SCN2A-204ENST00000424833 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
SCN2A-204ENST00000424833 DCAF1Q9Y4B6 1507 aa15.02■□□□□ -0
SCN2A-204ENST00000424833 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
SCN2A-204ENST00000424833 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.04
SCN2A-204ENST00000424833 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
SCN2A-204ENST00000424833 ABCC9O60706 1549 aa14.64□□□□□ -0.07
SCN2A-204ENST00000424833 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
SCN2A-204ENST00000424833 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
SCN2A-204ENST00000424833 NACADO15069 1562 aa14.53□□□□□ -0.08
SCN2A-204ENST00000424833 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
SCN2A-204ENST00000424833 RSF1Q96T23 1441 aaPredicted RBP14.28□□□□□ -0.12
SCN2A-204ENST00000424833 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
SCN2A-204ENST00000424833 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
SCN2A-204ENST00000424833 MROH2BQ7Z745 1585 aa14.14□□□□□ -0.15
SCN2A-204ENST00000424833 WIZO95785 1651 aa14.04□□□□□ -0.16
SCN2A-204ENST00000424833 BICRAQ9NZM4 1560 aa14.02□□□□□ -0.17
SCN2A-204ENST00000424833 BAZ1AQ9NRL2 1556 aaPredicted RBP14.01□□□□□ -0.17
SCN2A-204ENST00000424833 SMARCA4P51532 1647 aa13.96□□□□□ -0.18
SCN2A-204ENST00000424833 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCN2A-204ENST00000424833 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
SCN2A-204ENST00000424833 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
SCN2A-204ENST00000424833 SMARCA2P51531 1590 aa13.77□□□□□ -0.21
SCN2A-204ENST00000424833 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
SCN2A-204ENST00000424833 CCDC88BA6NC98 1476 aa13.73□□□□□ -0.21
SCN2A-204ENST00000424833 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
SCN2A-204ENST00000424833 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
SCN2A-204ENST00000424833 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
SCN2A-204ENST00000424833 ABCC8Q09428 1581 aa13.59□□□□□ -0.23
SCN2A-204ENST00000424833 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
SCN2A-204ENST00000424833 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
SCN2A-204ENST00000424833 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
SCN2A-204ENST00000424833 HMGXB3Q12766 1538 aa13.45□□□□□ -0.26
SCN2A-204ENST00000424833 NCAPD3P42695 1498 aa13.44□□□□□ -0.26
SCN2A-204ENST00000424833 SYNJ1O43426 1573 aa13.39□□□□□ -0.27
SCN2A-204ENST00000424833 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
SCN2A-204ENST00000424833 SOGA1O94964 1423 aa13.38□□□□□ -0.27
SCN2A-204ENST00000424833 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
SCN2A-204ENST00000424833 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
SCN2A-204ENST00000424833 RUSC2Q8N2Y8 1516 aa13.34□□□□□ -0.27
SCN2A-204ENST00000424833 EEA1Q15075 1411 aa13.28□□□□□ -0.28
SCN2A-204ENST00000424833 TOP2BQ02880 1626 aa13.27□□□□□ -0.29
SCN2A-204ENST00000424833 CC2D2AQ9P2K1 1620 aa13.25□□□□□ -0.29
SCN2A-204ENST00000424833 CFTRP13569 1480 aa13.25□□□□□ -0.29
SCN2A-204ENST00000424833 BIVM-ERCC5R4GMW8 1640 aa13.25□□□□□ -0.29
SCN2A-204ENST00000424833 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
SCN2A-204ENST00000424833 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
SCN2A-204ENST00000424833 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
SCN2A-204ENST00000424833 HRCP23327 699 aa13.2□□□□□ -0.3
SCN2A-204ENST00000424833 CUX1P39880 1505 aa13.19□□□□□ -0.3
SCN2A-204ENST00000424833 PRDM2Q13029 1718 aa13.19□□□□□ -0.3
SCN2A-204ENST00000424833 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
SCN2A-204ENST00000424833 KIF21BO75037 1637 aa13.18□□□□□ -0.3
SCN2A-204ENST00000424833 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
SCN2A-204ENST00000424833 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
SCN2A-204ENST00000424833 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
SCN2A-204ENST00000424833 CADPSQ9ULU8 1353 aa13.11□□□□□ -0.31
SCN2A-204ENST00000424833 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
SCN2A-204ENST00000424833 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
SCN2A-204ENST00000424833 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
SCN2A-204ENST00000424833 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
SCN2A-204ENST00000424833 PRXQ9BXM0 1461 aa13.03□□□□□ -0.32
SCN2A-204ENST00000424833 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
SCN2A-204ENST00000424833 NESP48681 1621 aa12.99□□□□□ -0.33
SCN2A-204ENST00000424833 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
SCN2A-204ENST00000424833 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
SCN2A-204ENST00000424833 CLIP1P30622 1438 aa12.98□□□□□ -0.33
SCN2A-204ENST00000424833 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
SCN2A-204ENST00000424833 DNAJC5BQ9UF47 199 aa12.94□□□□□ -0.34
SCN2A-204ENST00000424833 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
SCN2A-204ENST00000424833 CUX2O14529 1486 aa12.92□□□□□ -0.34
SCN2A-204ENST00000424833 LAMC3Q9Y6N6 1575 aa12.92□□□□□ -0.34
SCN2A-204ENST00000424833 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
SCN2A-204ENST00000424833 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
SCN2A-204ENST00000424833 IGF1RP08069 1367 aa12.89□□□□□ -0.35
SCN2A-204ENST00000424833 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
SCN2A-204ENST00000424833 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
SCN2A-204ENST00000424833 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
SCN2A-204ENST00000424833 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
SCN2A-204ENST00000424833 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
SCN2A-204ENST00000424833 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
SCN2A-204ENST00000424833 WDR97A6NE52 1622 aa12.83□□□□□ -0.36
SCN2A-204ENST00000424833 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
SCN2A-204ENST00000424833 RANGAP1P46060 587 aaPredicted RBP12.82□□□□□ -0.36
SCN2A-204ENST00000424833 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
SCN2A-204ENST00000424833 CARMIL1Q5VZK9 1371 aa12.79□□□□□ -0.36
SCN2A-204ENST00000424833 PDS5BQ9NTI5 1447 aa12.77□□□□□ -0.37
SCN2A-204ENST00000424833 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
SCN2A-204ENST00000424833 ABCA5Q8WWZ7 1642 aa12.75□□□□□ -0.37
SCN2A-204ENST00000424833 CUL7Q14999 1698 aa12.73□□□□□ -0.37
SCN2A-204ENST00000424833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
SCN2A-204ENST00000424833 TARBP1Q13395 1621 aaKnown RBP12.71□□□□□ -0.37
SCN2A-204ENST00000424833 TDRD9Q8NDG6 1382 aaKnown RBP12.68□□□□□ -0.38
SCN2A-204ENST00000424833 KANK4Q5T7N3 995 aaPredicted RBP12.67□□□□□ -0.38
SCN2A-204ENST00000424833 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
SCN2A-204ENST00000424833 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
SCN2A-204ENST00000424833 APLP2Q06481 763 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms