RNA–Protein interactions for RNA: ENST00000424659.5

STAMBP-205, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-205ENST00000424659 NISCHQ9Y2I1 1504 aa48.31■■■■■ 5.32
STAMBP-205ENST00000424659 CCDC180Q9P1Z9 1646 aa43.13■■■■■ 4.49
STAMBP-205ENST00000424659 ABCC9O60706 1549 aa42.84■■■■■ 4.45
STAMBP-205ENST00000424659 RB1CC1Q8TDY2 1594 aa40.88■■■■■ 4.13
STAMBP-205ENST00000424659 NACADO15069 1562 aa40.72■■■■■ 4.11
STAMBP-205ENST00000424659 DCAF8L2P0C7V8 631 aa40.58■■■■■ 4.09
STAMBP-205ENST00000424659 MYO15BQ96JP2 1530 aa40.3■■■■■ 4.04
STAMBP-205ENST00000424659 ZCCHC6Q5VYS8 1495 aaKnown RBP40.11■■■■■ 4.01
STAMBP-205ENST00000424659 UNC13AQ9UPW8 1703 aa40.01■■■■■ 4
STAMBP-205ENST00000424659 PABPN1Q86U42 306 aaKnown RBP eCLIP39.98■■■■□ 3.99
STAMBP-205ENST00000424659 DNAJC5BQ9UF47 199 aa39.98■■■■□ 3.99
STAMBP-205ENST00000424659 DCAF1Q9Y4B6 1507 aa39.91■■■■□ 3.98
STAMBP-205ENST00000424659 BICRAQ9NZM4 1560 aa39.77■■■■□ 3.96
STAMBP-205ENST00000424659 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
STAMBP-205ENST00000424659 SHROOM4Q9ULL8 1493 aa39.17■■■■□ 3.86
STAMBP-205ENST00000424659 CC2D2AQ9P2K1 1620 aa38.72■■■■□ 3.79
STAMBP-205ENST00000424659 EIF4G1Q04637 1599 aaKnown RBP38.72■■■■□ 3.79
STAMBP-205ENST00000424659 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
STAMBP-205ENST00000424659 NCAPD3P42695 1498 aa37.63■■■■□ 3.61
STAMBP-205ENST00000424659 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
STAMBP-205ENST00000424659 ATAD2BQ9ULI0 1458 aa37.57■■■■□ 3.6
STAMBP-205ENST00000424659 BAZ1AQ9NRL2 1556 aaPredicted RBP37.43■■■■□ 3.58
STAMBP-205ENST00000424659 SMARCA2P51531 1590 aa37.42■■■■□ 3.58
STAMBP-205ENST00000424659 HMGXB3Q12766 1538 aa37.34■■■■□ 3.57
STAMBP-205ENST00000424659 MROH2BQ7Z745 1585 aa37.25■■■■□ 3.55
STAMBP-205ENST00000424659 PEG3Q9GZU2 1588 aa37.24■■■■□ 3.55
STAMBP-205ENST00000424659 BAZ1BQ9UIG0 1483 aaKnown RBP37.17■■■■□ 3.54
STAMBP-205ENST00000424659 NESP48681 1621 aa36.93■■■■□ 3.5
STAMBP-205ENST00000424659 ERCC6Q03468 1493 aa36.9■■■■□ 3.5
STAMBP-205ENST00000424659 WIZO95785 1651 aa36.8■■■■□ 3.48
STAMBP-205ENST00000424659 CUX2O14529 1486 aa36.75■■■■□ 3.47
STAMBP-205ENST00000424659 LAMC3Q9Y6N6 1575 aa36.67■■■■□ 3.46
STAMBP-205ENST00000424659 RSF1Q96T23 1441 aaPredicted RBP36.61■■■■□ 3.45
STAMBP-205ENST00000424659 CADPSQ9ULU8 1353 aa36.5■■■■□ 3.43
STAMBP-205ENST00000424659 THOC2Q8NI27 1593 aaKnown RBP36.46■■■■□ 3.43
STAMBP-205ENST00000424659 PDS5BQ9NTI5 1447 aa36.45■■■■□ 3.43
STAMBP-205ENST00000424659 KIF21AQ7Z4S6 1674 aa36.42■■■■□ 3.42
STAMBP-205ENST00000424659 DNAJC5Q9H3Z4 198 aa36.39■■■■□ 3.42
STAMBP-205ENST00000424659 TOP2AP11388 1531 aaKnown RBP36.34■■■■□ 3.41
STAMBP-205ENST00000424659 CFTRP13569 1480 aa36.16■■■■□ 3.38
STAMBP-205ENST00000424659 MRC2Q9UBG0 1479 aa36.12■■■■□ 3.37
STAMBP-205ENST00000424659 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
STAMBP-205ENST00000424659 CEP164Q9UPV0 1460 aa36.04■■■■□ 3.36
STAMBP-205ENST00000424659 WDR62O43379 1518 aa36.03■■■■□ 3.36
STAMBP-205ENST00000424659 CCDC88BA6NC98 1476 aa35.96■■■■□ 3.35
STAMBP-205ENST00000424659 URB2Q14146 1524 aaKnown RBP35.77■■■■□ 3.32
STAMBP-205ENST00000424659 PRDM2Q13029 1718 aa35.75■■■■□ 3.31
STAMBP-205ENST00000424659 TOPBP1Q92547 1522 aa35.43■■■■□ 3.26
STAMBP-205ENST00000424659 ABCC8Q09428 1581 aa35.33■■■■□ 3.25
STAMBP-205ENST00000424659 IFT140Q96RY7 1462 aa35.32■■■■□ 3.24
STAMBP-205ENST00000424659 DNMBPQ6XZF7 1577 aa35.3■■■■□ 3.24
STAMBP-205ENST00000424659 ZNF608Q9ULD9 1512 aaPredicted RBP35.28■■■■□ 3.24
STAMBP-205ENST00000424659 SUPT5HO00267 1087 aaKnown RBP35.22■■■■□ 3.23
STAMBP-205ENST00000424659 OSCARQ8IYS5 282 aa35.15■■■■□ 3.22
STAMBP-205ENST00000424659 POLA1P09884 1462 aaPredicted RBP35.09■■■■□ 3.21
STAMBP-205ENST00000424659 TARBP1Q13395 1621 aaKnown RBP35.09■■■■□ 3.21
STAMBP-205ENST00000424659 EIF4G3O43432 1585 aaKnown RBP35.04■■■■□ 3.2
STAMBP-205ENST00000424659 AQRO60306 1485 aaKnown RBP eCLIP35■■■■□ 3.192e-7■■■□□ 19.2
STAMBP-205ENST00000424659 RAD54L2Q9Y4B4 1467 aa34.98■■■■□ 3.19
STAMBP-205ENST00000424659 CUX1P39880 1505 aa34.96■■■■□ 3.19
STAMBP-205ENST00000424659 SOGA1O94964 1423 aa34.93■■■■□ 3.18
STAMBP-205ENST00000424659 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
STAMBP-205ENST00000424659 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
STAMBP-205ENST00000424659 TDRD9Q8NDG6 1382 aaKnown RBP34.84■■■■□ 3.17
STAMBP-205ENST00000424659 CHD1O14646 1710 aa34.72■■■■□ 3.15
STAMBP-205ENST00000424659 WDR97A6NE52 1622 aa34.7■■■■□ 3.14
STAMBP-205ENST00000424659 RIMBP3CA6NJZ7 1639 aa34.65■■■■□ 3.14
STAMBP-205ENST00000424659 RIMBP3BA6NNM3 1639 aa34.65■■■■□ 3.14
STAMBP-205ENST00000424659 RIMBP3Q9UFD9 1639 aa34.65■■■■□ 3.14
STAMBP-205ENST00000424659 FBLN2P98095 1184 aa34.64■■■■□ 3.14
STAMBP-205ENST00000424659 SNAPC4Q5SXM2 1469 aa34.62■■■■□ 3.13
STAMBP-205ENST00000424659 ARHGEF11O15085 1522 aa34.58■■■■□ 3.13
STAMBP-205ENST00000424659 GRIN2BQ13224 1484 aa34.57■■■■□ 3.12
STAMBP-205ENST00000424659 ABCA10Q8WWZ4 1543 aa34.55■■■■□ 3.12
STAMBP-205ENST00000424659 MAGI1Q96QZ7 1491 aaPredicted RBP34.52■■■■□ 3.12
STAMBP-205ENST00000424659 GAPVD1Q14C86 1478 aa34.51■■■■□ 3.11
STAMBP-205ENST00000424659 WRNQ14191 1432 aaPredicted RBP eCLIP34.48■■■■□ 3.11
STAMBP-205ENST00000424659 TOP2BQ02880 1626 aa34.46■■■■□ 3.11
STAMBP-205ENST00000424659 BIVM-ERCC5R4GMW8 1640 aa34.46■■■■□ 3.11
STAMBP-205ENST00000424659 SYNJ1O43426 1573 aa34.45■■■■□ 3.11
STAMBP-205ENST00000424659 ABCA5Q8WWZ7 1642 aa34.45■■■■□ 3.11
STAMBP-205ENST00000424659 CHMP7Q8WUX9 453 aaPredicted RBP34.45■■■■□ 3.11
STAMBP-205ENST00000424659 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
STAMBP-205ENST00000424659 SYNJ2O15056 1496 aa34.41■■■■□ 3.1
STAMBP-205ENST00000424659 CLASP1Q7Z460 1538 aa34.36■■■■□ 3.09
STAMBP-205ENST00000424659 CYB5RLQ6IPT4 315 aa34.32■■■■□ 3.08
STAMBP-205ENST00000424659 ARAP1Q96P48 1450 aa34.29■■■■□ 3.08
STAMBP-205ENST00000424659 ADAMTS12P58397 1594 aa34.15■■■■□ 3.06
STAMBP-205ENST00000424659 GRIN2AQ12879 1464 aa34.14■■■■□ 3.06
STAMBP-205ENST00000424659 ERICH3Q5RHP9 1530 aa34.09■■■■□ 3.05
STAMBP-205ENST00000424659 FHAD1B1AJZ9 1412 aa34.08■■■■□ 3.05
STAMBP-205ENST00000424659 NUP160Q12769 1436 aa34.04■■■■□ 3.04
STAMBP-205ENST00000424659 CEP170Q5SW79 1584 aa34.01■■■■□ 3.03
STAMBP-205ENST00000424659 ERCC6L2Q5T890 1561 aa33.89■■■■□ 3.02
STAMBP-205ENST00000424659 SHROOM2Q13796 1616 aa33.82■■■■□ 3.01
STAMBP-205ENST00000424659 IGF1RP08069 1367 aa33.81■■■■□ 3
STAMBP-205ENST00000424659 KIF27Q86VH2 1401 aa33.79■■■■□ 3
STAMBP-205ENST00000424659 TRHP20396 242 aaPredicted RBP33.77■■■■□ 3
STAMBP-205ENST00000424659 JPH4Q96JJ6 628 aa33.69■■■□□ 2.98
STAMBP-205ENST00000424659 RUSC2Q8N2Y8 1516 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms