RNA–Protein interactions for RNA: ENST00000424647.1

PPM1F-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2

Gene PPM1F, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-204ENST00000424647 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
PPM1F-204ENST00000424647 CCDC180Q9P1Z9 1646 aa35.65■■■■□ 3.3
PPM1F-204ENST00000424647 ABCC9O60706 1549 aa35.23■■■■□ 3.23
PPM1F-204ENST00000424647 RB1CC1Q8TDY2 1594 aa33.75■■■□□ 2.99
PPM1F-204ENST00000424647 NACADO15069 1562 aa33.61■■■□□ 2.97
PPM1F-204ENST00000424647 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
PPM1F-204ENST00000424647 MYO15BQ96JP2 1530 aa33.29■■■□□ 2.92
PPM1F-204ENST00000424647 ZCCHC6Q5VYS8 1495 aaKnown RBP33.22■■■□□ 2.91
PPM1F-204ENST00000424647 DCAF1Q9Y4B6 1507 aa33.02■■■□□ 2.88
PPM1F-204ENST00000424647 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
PPM1F-204ENST00000424647 PABPN1Q86U42 306 aaKnown RBP eCLIP32.84■■■□□ 2.85
PPM1F-204ENST00000424647 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
PPM1F-204ENST00000424647 DNAJC5BQ9UF47 199 aa32.54■■■□□ 2.8
PPM1F-204ENST00000424647 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
PPM1F-204ENST00000424647 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
PPM1F-204ENST00000424647 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
PPM1F-204ENST00000424647 CC2D2AQ9P2K1 1620 aa31.82■■■□□ 2.69
PPM1F-204ENST00000424647 CECR2Q9BXF3 1484 aa31.71■■■□□ 2.67
PPM1F-204ENST00000424647 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
PPM1F-204ENST00000424647 BAZ1AQ9NRL2 1556 aaPredicted RBP31■■■□□ 2.55
PPM1F-204ENST00000424647 NCAPD3P42695 1498 aa31■■■□□ 2.55
PPM1F-204ENST00000424647 ATAD2BQ9ULI0 1458 aa30.98■■■□□ 2.55
PPM1F-204ENST00000424647 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
PPM1F-204ENST00000424647 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
PPM1F-204ENST00000424647 MROH2BQ7Z745 1585 aa30.75■■■□□ 2.51
PPM1F-204ENST00000424647 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
PPM1F-204ENST00000424647 BAZ1BQ9UIG0 1483 aaKnown RBP30.75■■■□□ 2.51
PPM1F-204ENST00000424647 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
PPM1F-204ENST00000424647 WIZO95785 1651 aa30.39■■■□□ 2.46
PPM1F-204ENST00000424647 NESP48681 1621 aa30.36■■■□□ 2.45
PPM1F-204ENST00000424647 RSF1Q96T23 1441 aaPredicted RBP30.29■■■□□ 2.44
PPM1F-204ENST00000424647 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
PPM1F-204ENST00000424647 CUX2O14529 1486 aa30.21■■■□□ 2.43
PPM1F-204ENST00000424647 TOP2AP11388 1531 aaKnown RBP30.11■■■□□ 2.41
PPM1F-204ENST00000424647 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
PPM1F-204ENST00000424647 PDS5BQ9NTI5 1447 aa30.09■■■□□ 2.41
PPM1F-204ENST00000424647 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
PPM1F-204ENST00000424647 KIF21AQ7Z4S6 1674 aa29.97■■■□□ 2.39
PPM1F-204ENST00000424647 CFTRP13569 1480 aa29.84■■■□□ 2.37
PPM1F-204ENST00000424647 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
PPM1F-204ENST00000424647 CEP164Q9UPV0 1460 aa29.79■■■□□ 2.36
PPM1F-204ENST00000424647 FANCD2Q9BXW9 1451 aa29.77■■■□□ 2.36
PPM1F-204ENST00000424647 CCDC88BA6NC98 1476 aa29.72■■■□□ 2.35
PPM1F-204ENST00000424647 WDR62O43379 1518 aa29.7■■■□□ 2.34
PPM1F-204ENST00000424647 DNAJC5Q9H3Z4 198 aa29.61■■■□□ 2.33
PPM1F-204ENST00000424647 PRDM2Q13029 1718 aa29.56■■■□□ 2.32
PPM1F-204ENST00000424647 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
PPM1F-204ENST00000424647 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
PPM1F-204ENST00000424647 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
PPM1F-204ENST00000424647 ABCC8Q09428 1581 aa29.23■■■□□ 2.27
PPM1F-204ENST00000424647 DNMBPQ6XZF7 1577 aa29.19■■■□□ 2.26
PPM1F-204ENST00000424647 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
PPM1F-204ENST00000424647 ZNF608Q9ULD9 1512 aaPredicted RBP29.03■■■□□ 2.24
PPM1F-204ENST00000424647 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
PPM1F-204ENST00000424647 EIF4G3O43432 1585 aaKnown RBP28.92■■■□□ 2.22
PPM1F-204ENST00000424647 TARBP1Q13395 1621 aaKnown RBP28.91■■■□□ 2.22
PPM1F-204ENST00000424647 CUX1P39880 1505 aa28.89■■■□□ 2.21
PPM1F-204ENST00000424647 FGD5Q6ZNL6 1462 aa28.87■■■□□ 2.21
PPM1F-204ENST00000424647 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
PPM1F-204ENST00000424647 SOGA1O94964 1423 aa28.85■■■□□ 2.21
PPM1F-204ENST00000424647 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
PPM1F-204ENST00000424647 AQRO60306 1485 aaKnown RBP eCLIP28.82■■■□□ 2.28e-23■■■■■ 46.4
PPM1F-204ENST00000424647 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
PPM1F-204ENST00000424647 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
PPM1F-204ENST00000424647 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
PPM1F-204ENST00000424647 FBLN2P98095 1184 aa28.59■■■□□ 2.17
PPM1F-204ENST00000424647 SNAPC4Q5SXM2 1469 aa28.59■■■□□ 2.17
PPM1F-204ENST00000424647 CHD1O14646 1710 aa28.58■■■□□ 2.17
PPM1F-204ENST00000424647 GRIN2BQ13224 1484 aa28.58■■■□□ 2.17
PPM1F-204ENST00000424647 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
PPM1F-204ENST00000424647 ABCA10Q8WWZ4 1543 aa28.56■■■□□ 2.16
PPM1F-204ENST00000424647 TOP2BQ02880 1626 aa28.55■■■□□ 2.16
PPM1F-204ENST00000424647 BIVM-ERCC5R4GMW8 1640 aa28.54■■■□□ 2.16
PPM1F-204ENST00000424647 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
PPM1F-204ENST00000424647 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
PPM1F-204ENST00000424647 GAPVD1Q14C86 1478 aa28.52■■■□□ 2.16
PPM1F-204ENST00000424647 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
PPM1F-204ENST00000424647 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
PPM1F-204ENST00000424647 CHMP7Q8WUX9 453 aaPredicted RBP28.45■■■□□ 2.14
PPM1F-204ENST00000424647 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
PPM1F-204ENST00000424647 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
PPM1F-204ENST00000424647 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
PPM1F-204ENST00000424647 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
PPM1F-204ENST00000424647 ARHGEF11O15085 1522 aa28.42■■■□□ 2.14
PPM1F-204ENST00000424647 CLASP1Q7Z460 1538 aa28.29■■■□□ 2.12
PPM1F-204ENST00000424647 ADAMTS12P58397 1594 aa28.25■■■□□ 2.11
PPM1F-204ENST00000424647 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
PPM1F-204ENST00000424647 GRIN2AQ12879 1464 aa28.2■■■□□ 2.1
PPM1F-204ENST00000424647 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
PPM1F-204ENST00000424647 ARAP1Q96P48 1450 aa28.16■■■□□ 2.1
PPM1F-204ENST00000424647 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
PPM1F-204ENST00000424647 NUP160Q12769 1436 aa28.08■■■□□ 2.09
PPM1F-204ENST00000424647 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
PPM1F-204ENST00000424647 KIF27Q86VH2 1401 aa28.05■■■□□ 2.08
PPM1F-204ENST00000424647 IGF1RP08069 1367 aa27.92■■■□□ 2.06
PPM1F-204ENST00000424647 CUL7Q14999 1698 aa27.91■■■□□ 2.06
PPM1F-204ENST00000424647 SHROOM2Q13796 1616 aa27.88■■■□□ 2.05
PPM1F-204ENST00000424647 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
PPM1F-204ENST00000424647 RUSC2Q8N2Y8 1516 aa27.84■■■□□ 2.05
PPM1F-204ENST00000424647 PRG4Q92954 1404 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms