RNA–Protein interactions for RNA: ENST00000424600.5

AFF3-207, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-207ENST00000424600 NISCHQ9Y2I1 1504 aa38.86■■■■□ 3.81
AFF3-207ENST00000424600 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
AFF3-207ENST00000424600 ABCC9O60706 1549 aa33.91■■■■□ 3.02
AFF3-207ENST00000424600 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
AFF3-207ENST00000424600 NACADO15069 1562 aa32.55■■■□□ 2.8
AFF3-207ENST00000424600 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
AFF3-207ENST00000424600 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
AFF3-207ENST00000424600 DCAF8L2P0C7V8 631 aa32.24■■■□□ 2.75
AFF3-207ENST00000424600 DCAF1Q9Y4B6 1507 aa32.19■■■□□ 2.74
AFF3-207ENST00000424600 UNC13AQ9UPW8 1703 aa32.02■■■□□ 2.72
AFF3-207ENST00000424600 BICRAQ9NZM4 1560 aa31.74■■■□□ 2.67
AFF3-207ENST00000424600 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
AFF3-207ENST00000424600 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
AFF3-207ENST00000424600 DNAJC5BQ9UF47 199 aa31.32■■■□□ 2.6
AFF3-207ENST00000424600 SHROOM4Q9ULL8 1493 aa31.32■■■□□ 2.6
AFF3-207ENST00000424600 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
AFF3-207ENST00000424600 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
AFF3-207ENST00000424600 CECR2Q9BXF3 1484 aa30.49■■■□□ 2.47
AFF3-207ENST00000424600 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
AFF3-207ENST00000424600 BAZ1AQ9NRL2 1556 aaPredicted RBP30.09■■■□□ 2.41
AFF3-207ENST00000424600 NCAPD3P42695 1498 aa30.05■■■□□ 2.4
AFF3-207ENST00000424600 ATAD2BQ9ULI0 1458 aa30.04■■■□□ 2.4
AFF3-207ENST00000424600 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
AFF3-207ENST00000424600 PEG3Q9GZU2 1588 aa29.96■■■□□ 2.39
AFF3-207ENST00000424600 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
AFF3-207ENST00000424600 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
AFF3-207ENST00000424600 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
AFF3-207ENST00000424600 WIZO95785 1651 aa29.63■■■□□ 2.33
AFF3-207ENST00000424600 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
AFF3-207ENST00000424600 NESP48681 1621 aa29.37■■■□□ 2.29
AFF3-207ENST00000424600 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
AFF3-207ENST00000424600 LAMC3Q9Y6N6 1575 aa29.26■■■□□ 2.28
AFF3-207ENST00000424600 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
AFF3-207ENST00000424600 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
AFF3-207ENST00000424600 KIF21AQ7Z4S6 1674 aa29.06■■■□□ 2.24
AFF3-207ENST00000424600 THOC2Q8NI27 1593 aaKnown RBP29.02■■■□□ 2.24
AFF3-207ENST00000424600 CUX2O14529 1486 aa29.01■■■□□ 2.23
AFF3-207ENST00000424600 PDS5BQ9NTI5 1447 aa28.99■■■□□ 2.23
AFF3-207ENST00000424600 CFTRP13569 1480 aa28.97■■■□□ 2.23
AFF3-207ENST00000424600 CCDC88BA6NC98 1476 aa28.93■■■□□ 2.22
AFF3-207ENST00000424600 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
AFF3-207ENST00000424600 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
AFF3-207ENST00000424600 MRC2Q9UBG0 1479 aa28.75■■■□□ 2.19
AFF3-207ENST00000424600 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
AFF3-207ENST00000424600 WDR62O43379 1518 aa28.73■■■□□ 2.19
AFF3-207ENST00000424600 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
AFF3-207ENST00000424600 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
AFF3-207ENST00000424600 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
AFF3-207ENST00000424600 DNMBPQ6XZF7 1577 aa28.3■■■□□ 2.12
AFF3-207ENST00000424600 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
AFF3-207ENST00000424600 DNAJC5Q9H3Z4 198 aa28.23■■■□□ 2.11
AFF3-207ENST00000424600 IFT140Q96RY7 1462 aa28.15■■■□□ 2.1
AFF3-207ENST00000424600 CUX1P39880 1505 aa28.11■■■□□ 2.09
AFF3-207ENST00000424600 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
AFF3-207ENST00000424600 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
AFF3-207ENST00000424600 ZNF608Q9ULD9 1512 aaPredicted RBP28.09■■■□□ 2.09
AFF3-207ENST00000424600 EIF4G3O43432 1585 aaKnown RBP27.99■■■□□ 2.07
AFF3-207ENST00000424600 FGD5Q6ZNL6 1462 aa27.99■■■□□ 2.07
AFF3-207ENST00000424600 RAD54L2Q9Y4B4 1467 aa27.95■■■□□ 2.07
AFF3-207ENST00000424600 SOGA1O94964 1423 aa27.91■■■□□ 2.06
AFF3-207ENST00000424600 WDR97A6NE52 1622 aa27.89■■■□□ 2.05
AFF3-207ENST00000424600 AQRO60306 1485 aaKnown RBP eCLIP27.87■■■□□ 2.05
AFF3-207ENST00000424600 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
AFF3-207ENST00000424600 SYNJ1O43426 1573 aa27.83■■■□□ 2.05
AFF3-207ENST00000424600 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
AFF3-207ENST00000424600 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
AFF3-207ENST00000424600 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
AFF3-207ENST00000424600 ABCA10Q8WWZ4 1543 aa27.74■■■□□ 2.03
AFF3-207ENST00000424600 ABCA5Q8WWZ7 1642 aa27.7■■■□□ 2.02
AFF3-207ENST00000424600 CHD1O14646 1710 aa27.68■■■□□ 2.02
AFF3-207ENST00000424600 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
AFF3-207ENST00000424600 PBRM1Q86U86 1689 aa27.64■■■□□ 2.02
AFF3-207ENST00000424600 GRIN2BQ13224 1484 aa27.62■■■□□ 2.01
AFF3-207ENST00000424600 SNAPC4Q5SXM2 1469 aa27.62■■■□□ 2.01
AFF3-207ENST00000424600 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
AFF3-207ENST00000424600 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
AFF3-207ENST00000424600 SYNJ2O15056 1496 aa27.47■■□□□ 1.99
AFF3-207ENST00000424600 ADAMTS12P58397 1594 aa27.41■■□□□ 1.98
AFF3-207ENST00000424600 CLASP1Q7Z460 1538 aa27.4■■□□□ 1.98
AFF3-207ENST00000424600 RIMBP3CA6NJZ7 1639 aa27.39■■□□□ 1.98
AFF3-207ENST00000424600 RIMBP3BA6NNM3 1639 aa27.39■■□□□ 1.98
AFF3-207ENST00000424600 RIMBP3Q9UFD9 1639 aa27.39■■□□□ 1.98
AFF3-207ENST00000424600 FBLN2P98095 1184 aa27.39■■□□□ 1.98
AFF3-207ENST00000424600 ERICH3Q5RHP9 1530 aa27.39■■□□□ 1.98
AFF3-207ENST00000424600 ARHGEF11O15085 1522 aa27.35■■□□□ 1.97
AFF3-207ENST00000424600 CHMP7Q8WUX9 453 aaPredicted RBP27.34■■□□□ 1.97
AFF3-207ENST00000424600 GRIN2AQ12879 1464 aa27.29■■□□□ 1.96
AFF3-207ENST00000424600 FHAD1B1AJZ9 1412 aa27.28■■□□□ 1.96
AFF3-207ENST00000424600 NUP160Q12769 1436 aa27.22■■□□□ 1.95
AFF3-207ENST00000424600 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
AFF3-207ENST00000424600 KIF27Q86VH2 1401 aa27.2■■□□□ 1.94
AFF3-207ENST00000424600 IGF1RP08069 1367 aa27.16■■□□□ 1.94
AFF3-207ENST00000424600 ARAP1Q96P48 1450 aa27.14■■□□□ 1.94
AFF3-207ENST00000424600 CUL7Q14999 1698 aa27.12■■□□□ 1.93
AFF3-207ENST00000424600 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
AFF3-207ENST00000424600 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
AFF3-207ENST00000424600 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
AFF3-207ENST00000424600 ERCC6L2Q5T890 1561 aa27.01■■□□□ 1.91
AFF3-207ENST00000424600 CYB5RLQ6IPT4 315 aa26.97■■□□□ 1.91
AFF3-207ENST00000424600 CARMIL1Q5VZK9 1371 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms