RNA–Protein interactions for RNA: ENST00000424596.1

PSPH-208, Transcript of phosphoserine phosphatase, humanhuman

TSL 4

Gene PSPH, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPH-208ENST00000424596 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
PSPH-208ENST00000424596 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
PSPH-208ENST00000424596 ABCC9O60706 1549 aa29.25■■■□□ 2.27
PSPH-208ENST00000424596 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
PSPH-208ENST00000424596 NACADO15069 1562 aa27.99■■■□□ 2.07
PSPH-208ENST00000424596 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.04
PSPH-208ENST00000424596 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
PSPH-208ENST00000424596 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
PSPH-208ENST00000424596 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
PSPH-208ENST00000424596 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
PSPH-208ENST00000424596 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
PSPH-208ENST00000424596 SCRIBQ14160 1630 aa27.22■■□□□ 1.95
PSPH-208ENST00000424596 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
PSPH-208ENST00000424596 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
PSPH-208ENST00000424596 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
PSPH-208ENST00000424596 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
PSPH-208ENST00000424596 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
PSPH-208ENST00000424596 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
PSPH-208ENST00000424596 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
PSPH-208ENST00000424596 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
PSPH-208ENST00000424596 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
PSPH-208ENST00000424596 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
PSPH-208ENST00000424596 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
PSPH-208ENST00000424596 HMGXB3Q12766 1538 aa25.74■■□□□ 1.71
PSPH-208ENST00000424596 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
PSPH-208ENST00000424596 MROH2BQ7Z745 1585 aa25.71■■□□□ 1.71
PSPH-208ENST00000424596 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
PSPH-208ENST00000424596 WIZO95785 1651 aa25.52■■□□□ 1.68
PSPH-208ENST00000424596 NESP48681 1621 aa25.3■■□□□ 1.64
PSPH-208ENST00000424596 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
PSPH-208ENST00000424596 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
PSPH-208ENST00000424596 ERCC6Q03468 1493 aa25.2■■□□□ 1.62
PSPH-208ENST00000424596 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
PSPH-208ENST00000424596 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
PSPH-208ENST00000424596 THOC2Q8NI27 1593 aaKnown RBP25.08■■□□□ 1.61
PSPH-208ENST00000424596 CUX2O14529 1486 aa25.02■■□□□ 1.6
PSPH-208ENST00000424596 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
PSPH-208ENST00000424596 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
PSPH-208ENST00000424596 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
PSPH-208ENST00000424596 CFTRP13569 1480 aa24.83■■□□□ 1.56
PSPH-208ENST00000424596 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
PSPH-208ENST00000424596 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
PSPH-208ENST00000424596 FANCD2Q9BXW9 1451 aa24.76■■□□□ 1.55
PSPH-208ENST00000424596 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
PSPH-208ENST00000424596 WDR62O43379 1518 aa24.76■■□□□ 1.55
PSPH-208ENST00000424596 URB2Q14146 1524 aaKnown RBP24.57■■□□□ 1.52
PSPH-208ENST00000424596 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
PSPH-208ENST00000424596 TOPBP1Q92547 1522 aa24.37■■□□□ 1.49
PSPH-208ENST00000424596 SUPT5HO00267 1087 aaKnown RBP24.36■■□□□ 1.49
PSPH-208ENST00000424596 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
PSPH-208ENST00000424596 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
PSPH-208ENST00000424596 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
PSPH-208ENST00000424596 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
PSPH-208ENST00000424596 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
PSPH-208ENST00000424596 ZNF608Q9ULD9 1512 aaPredicted RBP24.17■■□□□ 1.46
PSPH-208ENST00000424596 CUX1P39880 1505 aa24.15■■□□□ 1.46
PSPH-208ENST00000424596 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
PSPH-208ENST00000424596 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
PSPH-208ENST00000424596 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
PSPH-208ENST00000424596 RAD54L2Q9Y4B4 1467 aa24.02■■□□□ 1.44
PSPH-208ENST00000424596 CHD1O14646 1710 aa24.01■■□□□ 1.43
PSPH-208ENST00000424596 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
PSPH-208ENST00000424596 PBRM1Q86U86 1689 aa23.94■■□□□ 1.42
PSPH-208ENST00000424596 SYNJ1O43426 1573 aa23.94■■□□□ 1.42
PSPH-208ENST00000424596 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
PSPH-208ENST00000424596 SOGA1O94964 1423 aa23.93■■□□□ 1.42
PSPH-208ENST00000424596 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
PSPH-208ENST00000424596 ABCA5Q8WWZ7 1642 aa23.86■■□□□ 1.41
PSPH-208ENST00000424596 TDRD9Q8NDG6 1382 aaKnown RBP23.83■■□□□ 1.41
PSPH-208ENST00000424596 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.4
PSPH-208ENST00000424596 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
PSPH-208ENST00000424596 SNAPC4Q5SXM2 1469 aa23.79■■□□□ 1.4
PSPH-208ENST00000424596 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
PSPH-208ENST00000424596 GRIN2BQ13224 1484 aa23.74■■□□□ 1.39
PSPH-208ENST00000424596 MAGI1Q96QZ7 1491 aaPredicted RBP23.72■■□□□ 1.39
PSPH-208ENST00000424596 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
PSPH-208ENST00000424596 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
PSPH-208ENST00000424596 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
PSPH-208ENST00000424596 GAPVD1Q14C86 1478 aa23.71■■□□□ 1.39
PSPH-208ENST00000424596 ADAMTS12P58397 1594 aa23.65■■□□□ 1.38
PSPH-208ENST00000424596 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
PSPH-208ENST00000424596 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
PSPH-208ENST00000424596 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
PSPH-208ENST00000424596 FBLN2P98095 1184 aa23.58■■□□□ 1.37
PSPH-208ENST00000424596 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
PSPH-208ENST00000424596 GRIN2AQ12879 1464 aa23.48■■□□□ 1.35
PSPH-208ENST00000424596 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
PSPH-208ENST00000424596 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
PSPH-208ENST00000424596 TRIM41Q8WV44 630 aa23.46■■□□□ 1.35
PSPH-208ENST00000424596 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
PSPH-208ENST00000424596 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
PSPH-208ENST00000424596 CUL7Q14999 1698 aa23.38■■□□□ 1.33
PSPH-208ENST00000424596 NUP160Q12769 1436 aa23.35■■□□□ 1.33
PSPH-208ENST00000424596 SHROOM2Q13796 1616 aa23.35■■□□□ 1.33
PSPH-208ENST00000424596 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
PSPH-208ENST00000424596 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
PSPH-208ENST00000424596 ERCC6L2Q5T890 1561 aa23.28■■□□□ 1.32
PSPH-208ENST00000424596 IGF1RP08069 1367 aa23.19■■□□□ 1.3
PSPH-208ENST00000424596 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
PSPH-208ENST00000424596 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms