RNA–Protein interactions for RNA: ENST00000424442.5

ARPC4-TTLL3-203, Transcript of ARPC4-TTLL3 readthrough, humanhuman

TSL 5

Gene ARPC4-TTLL3, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-TTLL3-203ENST00000424442 NISCHQ9Y2I1 1504 aa28.15■■■□□ 2.1
ARPC4-TTLL3-203ENST00000424442 ABCC9O60706 1549 aa25.76■■□□□ 1.71
ARPC4-TTLL3-203ENST00000424442 CCDC180Q9P1Z9 1646 aa25.31■■□□□ 1.64
ARPC4-TTLL3-203ENST00000424442 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
ARPC4-TTLL3-203ENST00000424442 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
ARPC4-TTLL3-203ENST00000424442 NACADO15069 1562 aa24.04■■□□□ 1.44
ARPC4-TTLL3-203ENST00000424442 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
ARPC4-TTLL3-203ENST00000424442 PABPN1Q86U42 306 aaKnown RBP eCLIP23.96■■□□□ 1.43
ARPC4-TTLL3-203ENST00000424442 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
ARPC4-TTLL3-203ENST00000424442 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
ARPC4-TTLL3-203ENST00000424442 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
ARPC4-TTLL3-203ENST00000424442 ZCCHC6Q5VYS8 1495 aaKnown RBP23.28■■□□□ 1.32
ARPC4-TTLL3-203ENST00000424442 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
ARPC4-TTLL3-203ENST00000424442 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
ARPC4-TTLL3-203ENST00000424442 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
ARPC4-TTLL3-203ENST00000424442 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
ARPC4-TTLL3-203ENST00000424442 SCRIBQ14160 1630 aa23.16■■□□□ 1.3
ARPC4-TTLL3-203ENST00000424442 EIF4G1Q04637 1599 aaKnown RBP23.07■■□□□ 1.28
ARPC4-TTLL3-203ENST00000424442 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
ARPC4-TTLL3-203ENST00000424442 CUX2O14529 1486 aa22.27■■□□□ 1.16
ARPC4-TTLL3-203ENST00000424442 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
ARPC4-TTLL3-203ENST00000424442 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
ARPC4-TTLL3-203ENST00000424442 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
ARPC4-TTLL3-203ENST00000424442 NESP48681 1621 aa22.03■■□□□ 1.12
ARPC4-TTLL3-203ENST00000424442 SMARCA2P51531 1590 aa22.03■■□□□ 1.12
ARPC4-TTLL3-203ENST00000424442 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
ARPC4-TTLL3-203ENST00000424442 SMARCA4P51532 1647 aa22.01■■□□□ 1.11
ARPC4-TTLL3-203ENST00000424442 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
ARPC4-TTLL3-203ENST00000424442 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
ARPC4-TTLL3-203ENST00000424442 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
ARPC4-TTLL3-203ENST00000424442 PEG3Q9GZU2 1588 aa21.77■■□□□ 1.08
ARPC4-TTLL3-203ENST00000424442 LAMC3Q9Y6N6 1575 aa21.74■■□□□ 1.07
ARPC4-TTLL3-203ENST00000424442 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
ARPC4-TTLL3-203ENST00000424442 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
ARPC4-TTLL3-203ENST00000424442 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
ARPC4-TTLL3-203ENST00000424442 TRIM41Q8WV44 630 aa21.58■■□□□ 1.05
ARPC4-TTLL3-203ENST00000424442 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
ARPC4-TTLL3-203ENST00000424442 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
ARPC4-TTLL3-203ENST00000424442 WDR62O43379 1518 aa21.46■■□□□ 1.03
ARPC4-TTLL3-203ENST00000424442 WIZO95785 1651 aa21.4■■□□□ 1.02
ARPC4-TTLL3-203ENST00000424442 CEP164Q9UPV0 1460 aa21.38■■□□□ 1.01
ARPC4-TTLL3-203ENST00000424442 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
ARPC4-TTLL3-203ENST00000424442 CFTRP13569 1480 aa21.24■□□□□ 0.99
ARPC4-TTLL3-203ENST00000424442 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
ARPC4-TTLL3-203ENST00000424442 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
ARPC4-TTLL3-203ENST00000424442 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
ARPC4-TTLL3-203ENST00000424442 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.97
ARPC4-TTLL3-203ENST00000424442 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
ARPC4-TTLL3-203ENST00000424442 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
ARPC4-TTLL3-203ENST00000424442 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
ARPC4-TTLL3-203ENST00000424442 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
ARPC4-TTLL3-203ENST00000424442 IFT140Q96RY7 1462 aa20.95■□□□□ 0.94
ARPC4-TTLL3-203ENST00000424442 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
ARPC4-TTLL3-203ENST00000424442 ARHGEF11O15085 1522 aa20.89■□□□□ 0.94
ARPC4-TTLL3-203ENST00000424442 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
ARPC4-TTLL3-203ENST00000424442 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
ARPC4-TTLL3-203ENST00000424442 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
ARPC4-TTLL3-203ENST00000424442 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
ARPC4-TTLL3-203ENST00000424442 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
ARPC4-TTLL3-203ENST00000424442 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■■■■□ 19.4
ARPC4-TTLL3-203ENST00000424442 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
ARPC4-TTLL3-203ENST00000424442 FBLN2P98095 1184 aa20.71■□□□□ 0.91
ARPC4-TTLL3-203ENST00000424442 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
ARPC4-TTLL3-203ENST00000424442 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
ARPC4-TTLL3-203ENST00000424442 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
ARPC4-TTLL3-203ENST00000424442 TRHP20396 242 aaPredicted RBP20.66■□□□□ 0.9
ARPC4-TTLL3-203ENST00000424442 CHD1O14646 1710 aa20.66■□□□□ 0.9
ARPC4-TTLL3-203ENST00000424442 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
ARPC4-TTLL3-203ENST00000424442 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
ARPC4-TTLL3-203ENST00000424442 SOGA1O94964 1423 aa20.56■□□□□ 0.88
ARPC4-TTLL3-203ENST00000424442 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
ARPC4-TTLL3-203ENST00000424442 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
ARPC4-TTLL3-203ENST00000424442 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
ARPC4-TTLL3-203ENST00000424442 CLASP1Q7Z460 1538 aa20.47■□□□□ 0.87
ARPC4-TTLL3-203ENST00000424442 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
ARPC4-TTLL3-203ENST00000424442 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
ARPC4-TTLL3-203ENST00000424442 CUX1P39880 1505 aa20.42■□□□□ 0.86
ARPC4-TTLL3-203ENST00000424442 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
ARPC4-TTLL3-203ENST00000424442 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
ARPC4-TTLL3-203ENST00000424442 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
ARPC4-TTLL3-203ENST00000424442 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
ARPC4-TTLL3-203ENST00000424442 AEBP2Q6ZN18 517 aaPredicted RBP20.27■□□□□ 0.84
ARPC4-TTLL3-203ENST00000424442 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
ARPC4-TTLL3-203ENST00000424442 ABCA10Q8WWZ4 1543 aa20.22■□□□□ 0.83
ARPC4-TTLL3-203ENST00000424442 ABCA5Q8WWZ7 1642 aa20.2■□□□□ 0.82
ARPC4-TTLL3-203ENST00000424442 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
ARPC4-TTLL3-203ENST00000424442 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
ARPC4-TTLL3-203ENST00000424442 ADAMTS12P58397 1594 aa20.1■□□□□ 0.81
ARPC4-TTLL3-203ENST00000424442 NUP160Q12769 1436 aa20.1■□□□□ 0.81
ARPC4-TTLL3-203ENST00000424442 CEP170Q5SW79 1584 aa20.09■□□□□ 0.81
ARPC4-TTLL3-203ENST00000424442 WRNQ14191 1432 aaPredicted RBP eCLIP20.09■□□□□ 0.81
ARPC4-TTLL3-203ENST00000424442 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
ARPC4-TTLL3-203ENST00000424442 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
ARPC4-TTLL3-203ENST00000424442 SHROOM2Q13796 1616 aa19.98■□□□□ 0.79
ARPC4-TTLL3-203ENST00000424442 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
ARPC4-TTLL3-203ENST00000424442 PRG4Q92954 1404 aaPredicted RBP19.94■□□□□ 0.78
ARPC4-TTLL3-203ENST00000424442 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
ARPC4-TTLL3-203ENST00000424442 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
ARPC4-TTLL3-203ENST00000424442 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
ARPC4-TTLL3-203ENST00000424442 FAM69CQ0P6D2 419 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 1257.4 ms