RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 NISCHQ9Y2I1 1504 aa45.41■■■■■ 4.86
PRNP-202ENST00000424424 CCDC180Q9P1Z9 1646 aa40.47■■■■■ 4.07
PRNP-202ENST00000424424 ABCC9O60706 1549 aa39.64■■■■□ 3.94
PRNP-202ENST00000424424 RB1CC1Q8TDY2 1594 aa38.14■■■■□ 3.7
PRNP-202ENST00000424424 NACADO15069 1562 aa38.06■■■■□ 3.68
PRNP-202ENST00000424424 DCAF8L2P0C7V8 631 aa38.06■■■■□ 3.68
PRNP-202ENST00000424424 ZCCHC6Q5VYS8 1495 aaKnown RBP37.78■■■■□ 3.64
PRNP-202ENST00000424424 MYO15BQ96JP2 1530 aa37.77■■■■□ 3.64
PRNP-202ENST00000424424 DCAF1Q9Y4B6 1507 aa37.57■■■■□ 3.61
PRNP-202ENST00000424424 UNC13AQ9UPW8 1703 aa37.29■■■■□ 3.56
PRNP-202ENST00000424424 PABPN1Q86U42 306 aaKnown RBP eCLIP37.01■■■■□ 3.52
PRNP-202ENST00000424424 DNAJC5BQ9UF47 199 aa36.95■■■■□ 3.51
PRNP-202ENST00000424424 BICRAQ9NZM4 1560 aa36.91■■■■□ 3.5
PRNP-202ENST00000424424 SCRIBQ14160 1630 aa36.88■■■■□ 3.5
PRNP-202ENST00000424424 SHROOM4Q9ULL8 1493 aa36.56■■■■□ 3.44
PRNP-202ENST00000424424 EIF4G1Q04637 1599 aaKnown RBP35.98■■■■□ 3.35
PRNP-202ENST00000424424 CC2D2AQ9P2K1 1620 aa35.87■■■■□ 3.33
PRNP-202ENST00000424424 CECR2Q9BXF3 1484 aa35.63■■■■□ 3.29
PRNP-202ENST00000424424 SMARCA4P51532 1647 aa35.28■■■■□ 3.24
PRNP-202ENST00000424424 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
PRNP-202ENST00000424424 NCAPD3P42695 1498 aa35.09■■■■□ 3.21
PRNP-202ENST00000424424 SMARCA2P51531 1590 aa35.08■■■■□ 3.21
PRNP-202ENST00000424424 ATAD2BQ9ULI0 1458 aa35.08■■■■□ 3.21
PRNP-202ENST00000424424 MROH2BQ7Z745 1585 aa34.97■■■■□ 3.19
PRNP-202ENST00000424424 PEG3Q9GZU2 1588 aa34.91■■■■□ 3.18
PRNP-202ENST00000424424 HMGXB3Q12766 1538 aa34.91■■■■□ 3.18
PRNP-202ENST00000424424 BAZ1BQ9UIG0 1483 aaKnown RBP34.83■■■■□ 3.17
PRNP-202ENST00000424424 WIZO95785 1651 aa34.64■■■■□ 3.14
PRNP-202ENST00000424424 RSF1Q96T23 1441 aaPredicted RBP34.54■■■■□ 3.12
PRNP-202ENST00000424424 NESP48681 1621 aa34.25■■■■□ 3.07
PRNP-202ENST00000424424 TOP2AP11388 1531 aaKnown RBP34.25■■■■□ 3.07
PRNP-202ENST00000424424 LAMC3Q9Y6N6 1575 aa34.23■■■■□ 3.07
PRNP-202ENST00000424424 ERCC6Q03468 1493 aa34.22■■■■□ 3.07
PRNP-202ENST00000424424 DNAJC5Q9H3Z4 198 aa34.12■■■■□ 3.05
PRNP-202ENST00000424424 CADPSQ9ULU8 1353 aa34.07■■■■□ 3.04
PRNP-202ENST00000424424 PDS5BQ9NTI5 1447 aa33.99■■■■□ 3.03
PRNP-202ENST00000424424 KIF21AQ7Z4S6 1674 aa33.91■■■■□ 3.02
PRNP-202ENST00000424424 CUX2O14529 1486 aa33.88■■■■□ 3.01
PRNP-202ENST00000424424 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
PRNP-202ENST00000424424 CFTRP13569 1480 aa33.83■■■■□ 3.01
PRNP-202ENST00000424424 THOC2Q8NI27 1593 aaKnown RBP33.77■■■■□ 3
PRNP-202ENST00000424424 FANCD2Q9BXW9 1451 aa33.68■■■□□ 2.98
PRNP-202ENST00000424424 PRDM2Q13029 1718 aa33.67■■■□□ 2.98
PRNP-202ENST00000424424 CEP164Q9UPV0 1460 aa33.67■■■□□ 2.98
PRNP-202ENST00000424424 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
PRNP-202ENST00000424424 MRC2Q9UBG0 1479 aa33.62■■■□□ 2.97
PRNP-202ENST00000424424 WDR62O43379 1518 aa33.5■■■□□ 2.95
PRNP-202ENST00000424424 URB2Q14146 1524 aaKnown RBP33.32■■■□□ 2.92
PRNP-202ENST00000424424 ABCC8Q09428 1581 aa33.18■■■□□ 2.9
PRNP-202ENST00000424424 TOPBP1Q92547 1522 aa33.12■■■□□ 2.89
PRNP-202ENST00000424424 DNMBPQ6XZF7 1577 aa33.1■■■□□ 2.89
PRNP-202ENST00000424424 IFT140Q96RY7 1462 aa32.95■■■□□ 2.87
PRNP-202ENST00000424424 POLA1P09884 1462 aaPredicted RBP32.82■■■□□ 2.84
PRNP-202ENST00000424424 CUX1P39880 1505 aa32.82■■■□□ 2.84
PRNP-202ENST00000424424 TARBP1Q13395 1621 aaKnown RBP32.77■■■□□ 2.84
PRNP-202ENST00000424424 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
PRNP-202ENST00000424424 FGD5Q6ZNL6 1462 aa32.74■■■□□ 2.83
PRNP-202ENST00000424424 SOGA1O94964 1423 aa32.73■■■□□ 2.83
PRNP-202ENST00000424424 EIF4G3O43432 1585 aaKnown RBP32.68■■■□□ 2.82
PRNP-202ENST00000424424 RAD54L2Q9Y4B4 1467 aa32.67■■■□□ 2.82
PRNP-202ENST00000424424 WRNQ14191 1432 aaPredicted RBP eCLIP32.6■■■□□ 2.81
PRNP-202ENST00000424424 AQRO60306 1485 aaKnown RBP eCLIP32.6■■■□□ 2.81
PRNP-202ENST00000424424 WDR97A6NE52 1622 aa32.56■■■□□ 2.8
PRNP-202ENST00000424424 BIVM-ERCC5R4GMW8 1640 aa32.56■■■□□ 2.8
PRNP-202ENST00000424424 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
PRNP-202ENST00000424424 TDRD9Q8NDG6 1382 aaKnown RBP32.52■■■□□ 2.8
PRNP-202ENST00000424424 SYNJ1O43426 1573 aa32.5■■■□□ 2.79
PRNP-202ENST00000424424 OSCARQ8IYS5 282 aa32.49■■■□□ 2.79
PRNP-202ENST00000424424 ABCA10Q8WWZ4 1543 aa32.42■■■□□ 2.78
PRNP-202ENST00000424424 TRIM41Q8WV44 630 aa32.42■■■□□ 2.78
PRNP-202ENST00000424424 GRIN2BQ13224 1484 aa32.35■■■□□ 2.77
PRNP-202ENST00000424424 GAPVD1Q14C86 1478 aa32.35■■■□□ 2.77
PRNP-202ENST00000424424 CHD1O14646 1710 aa32.32■■■□□ 2.76
PRNP-202ENST00000424424 PBRM1Q86U86 1689 aa32.32■■■□□ 2.76
PRNP-202ENST00000424424 SNAPC4Q5SXM2 1469 aa32.3■■■□□ 2.76
PRNP-202ENST00000424424 ABCA5Q8WWZ7 1642 aa32.3■■■□□ 2.76
PRNP-202ENST00000424424 FBLN2P98095 1184 aa32.29■■■□□ 2.76
PRNP-202ENST00000424424 MAGI1Q96QZ7 1491 aaPredicted RBP32.28■■■□□ 2.76
PRNP-202ENST00000424424 CHMP7Q8WUX9 453 aaPredicted RBP32.19■■■□□ 2.74
PRNP-202ENST00000424424 SYNJ2O15056 1496 aa32.15■■■□□ 2.74
PRNP-202ENST00000424424 ERICH3Q5RHP9 1530 aa32.05■■■□□ 2.72
PRNP-202ENST00000424424 ADAMTS12P58397 1594 aa32■■■□□ 2.71
PRNP-202ENST00000424424 FHAD1B1AJZ9 1412 aa31.96■■■□□ 2.71
PRNP-202ENST00000424424 KIF27Q86VH2 1401 aa31.95■■■□□ 2.71
PRNP-202ENST00000424424 RIMBP3CA6NJZ7 1639 aa31.94■■■□□ 2.7
PRNP-202ENST00000424424 RIMBP3BA6NNM3 1639 aa31.94■■■□□ 2.7
PRNP-202ENST00000424424 RIMBP3Q9UFD9 1639 aa31.94■■■□□ 2.7
PRNP-202ENST00000424424 GRIN2AQ12879 1464 aa31.92■■■□□ 2.7
PRNP-202ENST00000424424 CLASP1Q7Z460 1538 aa31.91■■■□□ 2.7
PRNP-202ENST00000424424 ARHGEF11O15085 1522 aa31.9■■■□□ 2.7
PRNP-202ENST00000424424 IGF1RP08069 1367 aa31.79■■■□□ 2.68
PRNP-202ENST00000424424 CUL7Q14999 1698 aa31.78■■■□□ 2.68
PRNP-202ENST00000424424 NUP160Q12769 1436 aa31.76■■■□□ 2.68
PRNP-202ENST00000424424 CEP170Q5SW79 1584 aa31.75■■■□□ 2.67
PRNP-202ENST00000424424 CYB5RLQ6IPT4 315 aa31.65■■■□□ 2.66
PRNP-202ENST00000424424 CARMIL1Q5VZK9 1371 aa31.64■■■□□ 2.66
PRNP-202ENST00000424424 ARAP1Q96P48 1450 aa31.63■■■□□ 2.65
PRNP-202ENST00000424424 RUSC2Q8N2Y8 1516 aa31.57■■■□□ 2.64
PRNP-202ENST00000424424 SHROOM2Q13796 1616 aa31.56■■■□□ 2.64
PRNP-202ENST00000424424 JPH4Q96JJ6 628 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms