RNA–Protein interactions for RNA: ENST00000424369.5

TRIM6-204, Transcript of tripartite motif containing 6, humanhuman

TSL 3

Gene TRIM6, Length 468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-204ENST00000424369 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
TRIM6-204ENST00000424369 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
TRIM6-204ENST00000424369 ABCC9O60706 1549 aa22.3■■□□□ 1.16
TRIM6-204ENST00000424369 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
TRIM6-204ENST00000424369 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
TRIM6-204ENST00000424369 NACADO15069 1562 aa21.25■□□□□ 0.99
TRIM6-204ENST00000424369 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
TRIM6-204ENST00000424369 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
TRIM6-204ENST00000424369 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
TRIM6-204ENST00000424369 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRIM6-204ENST00000424369 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
TRIM6-204ENST00000424369 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
TRIM6-204ENST00000424369 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
TRIM6-204ENST00000424369 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
TRIM6-204ENST00000424369 SHROOM4Q9ULL8 1493 aa20.31■□□□□ 0.84
TRIM6-204ENST00000424369 EIF4G1Q04637 1599 aaKnown RBP20.14■□□□□ 0.81
TRIM6-204ENST00000424369 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
TRIM6-204ENST00000424369 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
TRIM6-204ENST00000424369 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
TRIM6-204ENST00000424369 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
TRIM6-204ENST00000424369 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
TRIM6-204ENST00000424369 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
TRIM6-204ENST00000424369 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
TRIM6-204ENST00000424369 SMARCA2P51531 1590 aa19.59■□□□□ 0.73
TRIM6-204ENST00000424369 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
TRIM6-204ENST00000424369 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
TRIM6-204ENST00000424369 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
TRIM6-204ENST00000424369 WIZO95785 1651 aa19.48■□□□□ 0.71
TRIM6-204ENST00000424369 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
TRIM6-204ENST00000424369 NESP48681 1621 aa19.31■□□□□ 0.68
TRIM6-204ENST00000424369 TOP2AP11388 1531 aaKnown RBP19.19■□□□□ 0.66
TRIM6-204ENST00000424369 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
TRIM6-204ENST00000424369 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
TRIM6-204ENST00000424369 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
TRIM6-204ENST00000424369 LAMC3Q9Y6N6 1575 aa19.09■□□□□ 0.65
TRIM6-204ENST00000424369 CCDC88BA6NC98 1476 aa19.07■□□□□ 0.64
TRIM6-204ENST00000424369 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
TRIM6-204ENST00000424369 CFTRP13569 1480 aa18.98■□□□□ 0.63
TRIM6-204ENST00000424369 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
TRIM6-204ENST00000424369 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
TRIM6-204ENST00000424369 CUX2O14529 1486 aa18.89■□□□□ 0.61
TRIM6-204ENST00000424369 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
TRIM6-204ENST00000424369 CEP164Q9UPV0 1460 aa18.84■□□□□ 0.61
TRIM6-204ENST00000424369 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
TRIM6-204ENST00000424369 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
TRIM6-204ENST00000424369 WDR62O43379 1518 aa18.73■□□□□ 0.59
TRIM6-204ENST00000424369 PRDM2Q13029 1718 aa18.7■□□□□ 0.58
TRIM6-204ENST00000424369 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
TRIM6-204ENST00000424369 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
TRIM6-204ENST00000424369 ABCC8Q09428 1581 aa18.5■□□□□ 0.55
TRIM6-204ENST00000424369 DNAJC5Q9H3Z4 198 aa18.49■□□□□ 0.55
TRIM6-204ENST00000424369 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
TRIM6-204ENST00000424369 CUX1P39880 1505 aa18.46■□□□□ 0.55
TRIM6-204ENST00000424369 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
TRIM6-204ENST00000424369 RAD54L2Q9Y4B4 1467 aa18.44■□□□□ 0.54
TRIM6-204ENST00000424369 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
TRIM6-204ENST00000424369 SOGA1O94964 1423 aa18.4■□□□□ 0.54
TRIM6-204ENST00000424369 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.54
TRIM6-204ENST00000424369 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.539e-8■■□□□ 11.9
TRIM6-204ENST00000424369 TARBP1Q13395 1621 aaKnown RBP18.37■□□□□ 0.53
TRIM6-204ENST00000424369 TDRD9Q8NDG6 1382 aaKnown RBP18.36■□□□□ 0.53
TRIM6-204ENST00000424369 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
TRIM6-204ENST00000424369 SYNJ1O43426 1573 aa18.29■□□□□ 0.52
TRIM6-204ENST00000424369 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
TRIM6-204ENST00000424369 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
TRIM6-204ENST00000424369 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
TRIM6-204ENST00000424369 FBLN2P98095 1184 aa18.21■□□□□ 0.51
TRIM6-204ENST00000424369 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
TRIM6-204ENST00000424369 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
TRIM6-204ENST00000424369 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
TRIM6-204ENST00000424369 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
TRIM6-204ENST00000424369 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.49
TRIM6-204ENST00000424369 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
TRIM6-204ENST00000424369 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
TRIM6-204ENST00000424369 ABCA5Q8WWZ7 1642 aa18.08■□□□□ 0.48
TRIM6-204ENST00000424369 CHD1O14646 1710 aa18.06■□□□□ 0.48
TRIM6-204ENST00000424369 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
TRIM6-204ENST00000424369 MAGI1Q96QZ7 1491 aaPredicted RBP18.03■□□□□ 0.48
TRIM6-204ENST00000424369 SYNJ2O15056 1496 aa18■□□□□ 0.47
TRIM6-204ENST00000424369 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
TRIM6-204ENST00000424369 IGF1RP08069 1367 aa17.94■□□□□ 0.46
TRIM6-204ENST00000424369 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
TRIM6-204ENST00000424369 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
TRIM6-204ENST00000424369 KIF27Q86VH2 1401 aa17.92■□□□□ 0.46
TRIM6-204ENST00000424369 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
TRIM6-204ENST00000424369 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
TRIM6-204ENST00000424369 GRIN2AQ12879 1464 aa17.89■□□□□ 0.45
TRIM6-204ENST00000424369 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
TRIM6-204ENST00000424369 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
TRIM6-204ENST00000424369 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
TRIM6-204ENST00000424369 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
TRIM6-204ENST00000424369 CLASP1Q7Z460 1538 aa17.86■□□□□ 0.45
TRIM6-204ENST00000424369 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
TRIM6-204ENST00000424369 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
TRIM6-204ENST00000424369 NUP160Q12769 1436 aa17.81■□□□□ 0.44
TRIM6-204ENST00000424369 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
TRIM6-204ENST00000424369 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
TRIM6-204ENST00000424369 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
TRIM6-204ENST00000424369 JPH4Q96JJ6 628 aa17.74■□□□□ 0.43
TRIM6-204ENST00000424369 ERCC6L2Q5T890 1561 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms