RNA–Protein interactions for RNA: ENST00000424364.6

LINC00486-202, long intergenic non-protein coding RNA 486, humanhuman

TSL 5 BASIC

Gene LINC00486, Length 691 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00486-202ENST00000424364 NISCHQ9Y2I1 1504 aa26.42■■□□□ 1.82
LINC00486-202ENST00000424364 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
LINC00486-202ENST00000424364 ABCC9O60706 1549 aa22.21■■□□□ 1.15
LINC00486-202ENST00000424364 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
LINC00486-202ENST00000424364 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
LINC00486-202ENST00000424364 MYO15BQ96JP2 1530 aa21.87■■□□□ 1.09
LINC00486-202ENST00000424364 NACADO15069 1562 aa21.77■■□□□ 1.08
LINC00486-202ENST00000424364 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
LINC00486-202ENST00000424364 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
LINC00486-202ENST00000424364 SCRIBQ14160 1630 aa21.19■□□□□ 0.98
LINC00486-202ENST00000424364 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
LINC00486-202ENST00000424364 SHROOM4Q9ULL8 1493 aa21.04■□□□□ 0.96
LINC00486-202ENST00000424364 BICRAQ9NZM4 1560 aa20.98■□□□□ 0.95
LINC00486-202ENST00000424364 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
LINC00486-202ENST00000424364 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
LINC00486-202ENST00000424364 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
LINC00486-202ENST00000424364 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
LINC00486-202ENST00000424364 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
LINC00486-202ENST00000424364 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
LINC00486-202ENST00000424364 RSF1Q96T23 1441 aaPredicted RBP20.31■□□□□ 0.84
LINC00486-202ENST00000424364 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
LINC00486-202ENST00000424364 SMARCA2P51531 1590 aa20.16■□□□□ 0.82
LINC00486-202ENST00000424364 ATAD2BQ9ULI0 1458 aa20.14■□□□□ 0.81
LINC00486-202ENST00000424364 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
LINC00486-202ENST00000424364 WIZO95785 1651 aa20.11■□□□□ 0.81
LINC00486-202ENST00000424364 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
LINC00486-202ENST00000424364 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
LINC00486-202ENST00000424364 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
LINC00486-202ENST00000424364 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
LINC00486-202ENST00000424364 TOP2AP11388 1531 aaKnown RBP19.98■□□□□ 0.79
LINC00486-202ENST00000424364 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
LINC00486-202ENST00000424364 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
LINC00486-202ENST00000424364 CFTRP13569 1480 aa19.52■□□□□ 0.72
LINC00486-202ENST00000424364 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
LINC00486-202ENST00000424364 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
LINC00486-202ENST00000424364 NESP48681 1621 aa19.37■□□□□ 0.69
LINC00486-202ENST00000424364 PRDM2Q13029 1718 aa19.37■□□□□ 0.69
LINC00486-202ENST00000424364 PDS5BQ9NTI5 1447 aa19.31■□□□□ 0.68
LINC00486-202ENST00000424364 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
LINC00486-202ENST00000424364 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
LINC00486-202ENST00000424364 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
LINC00486-202ENST00000424364 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
LINC00486-202ENST00000424364 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
LINC00486-202ENST00000424364 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
LINC00486-202ENST00000424364 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
LINC00486-202ENST00000424364 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
LINC00486-202ENST00000424364 CUX1P39880 1505 aa19.05■□□□□ 0.64
LINC00486-202ENST00000424364 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
LINC00486-202ENST00000424364 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
LINC00486-202ENST00000424364 URB2Q14146 1524 aaKnown RBP19.04■□□□□ 0.64
LINC00486-202ENST00000424364 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
LINC00486-202ENST00000424364 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
LINC00486-202ENST00000424364 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
LINC00486-202ENST00000424364 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
LINC00486-202ENST00000424364 WDR62O43379 1518 aa19■□□□□ 0.63
LINC00486-202ENST00000424364 TRIM41Q8WV44 630 aa18.97■□□□□ 0.63
LINC00486-202ENST00000424364 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
LINC00486-202ENST00000424364 POLA1P09884 1462 aaPredicted RBP18.89■□□□□ 0.61
LINC00486-202ENST00000424364 CUX2O14529 1486 aa18.83■□□□□ 0.6
LINC00486-202ENST00000424364 SOGA1O94964 1423 aa18.81■□□□□ 0.6
LINC00486-202ENST00000424364 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
LINC00486-202ENST00000424364 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
LINC00486-202ENST00000424364 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
LINC00486-202ENST00000424364 RAD54L2Q9Y4B4 1467 aa18.76■□□□□ 0.59
LINC00486-202ENST00000424364 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
LINC00486-202ENST00000424364 EEA1Q15075 1411 aa18.71■□□□□ 0.59
LINC00486-202ENST00000424364 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
LINC00486-202ENST00000424364 ABCA5Q8WWZ7 1642 aa18.64■□□□□ 0.57
LINC00486-202ENST00000424364 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
LINC00486-202ENST00000424364 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
LINC00486-202ENST00000424364 ZNF608Q9ULD9 1512 aaPredicted RBP18.62■□□□□ 0.57
LINC00486-202ENST00000424364 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
LINC00486-202ENST00000424364 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.56
LINC00486-202ENST00000424364 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
LINC00486-202ENST00000424364 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.56
LINC00486-202ENST00000424364 IGF1RP08069 1367 aa18.55■□□□□ 0.56
LINC00486-202ENST00000424364 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
LINC00486-202ENST00000424364 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
LINC00486-202ENST00000424364 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
LINC00486-202ENST00000424364 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
LINC00486-202ENST00000424364 PRXQ9BXM0 1461 aa18.49■□□□□ 0.55
LINC00486-202ENST00000424364 CUL7Q14999 1698 aa18.47■□□□□ 0.55
LINC00486-202ENST00000424364 MAGI1Q96QZ7 1491 aaPredicted RBP18.46■□□□□ 0.55
LINC00486-202ENST00000424364 KIF21BO75037 1637 aa18.44■□□□□ 0.54
LINC00486-202ENST00000424364 CARMIL1Q5VZK9 1371 aa18.43■□□□□ 0.54
LINC00486-202ENST00000424364 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
LINC00486-202ENST00000424364 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
LINC00486-202ENST00000424364 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
LINC00486-202ENST00000424364 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.54
LINC00486-202ENST00000424364 SYNJ2O15056 1496 aa18.38■□□□□ 0.53
LINC00486-202ENST00000424364 GOLGA3Q08378 1498 aa18.36■□□□□ 0.53
LINC00486-202ENST00000424364 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
LINC00486-202ENST00000424364 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
LINC00486-202ENST00000424364 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
LINC00486-202ENST00000424364 TNIKQ9UKE5 1360 aa18.24■□□□□ 0.51
LINC00486-202ENST00000424364 NUP160Q12769 1436 aa18.23■□□□□ 0.51
LINC00486-202ENST00000424364 CHD1O14646 1710 aa18.22■□□□□ 0.51
LINC00486-202ENST00000424364 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
LINC00486-202ENST00000424364 FBLN2P98095 1184 aa18.19■□□□□ 0.5
LINC00486-202ENST00000424364 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms