RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
FOXN4-203ENST00000423960 CCDC180Q9P1Z9 1646 aa35.69■■■■□ 3.3
FOXN4-203ENST00000423960 ABCC9O60706 1549 aa35.47■■■■□ 3.27
FOXN4-203ENST00000423960 RB1CC1Q8TDY2 1594 aa33.83■■■■□ 3.01
FOXN4-203ENST00000423960 DCAF8L2P0C7V8 631 aa33.82■■■■□ 3
FOXN4-203ENST00000423960 ZCCHC6Q5VYS8 1495 aaKnown RBP33.74■■■□□ 2.99
FOXN4-203ENST00000423960 NACADO15069 1562 aa33.68■■■□□ 2.98
FOXN4-203ENST00000423960 MYO15BQ96JP2 1530 aa33.46■■■□□ 2.95
FOXN4-203ENST00000423960 DCAF1Q9Y4B6 1507 aa33.46■■■□□ 2.95
FOXN4-203ENST00000423960 PABPN1Q86U42 306 aaKnown RBP eCLIP33.15■■■□□ 2.9
FOXN4-203ENST00000423960 UNC13AQ9UPW8 1703 aa32.98■■■□□ 2.87
FOXN4-203ENST00000423960 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
FOXN4-203ENST00000423960 BICRAQ9NZM4 1560 aa32.84■■■□□ 2.85
FOXN4-203ENST00000423960 SCRIBQ14160 1630 aa32.66■■■□□ 2.82
FOXN4-203ENST00000423960 SHROOM4Q9ULL8 1493 aa32.38■■■□□ 2.77
FOXN4-203ENST00000423960 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
FOXN4-203ENST00000423960 CC2D2AQ9P2K1 1620 aa31.98■■■□□ 2.71
FOXN4-203ENST00000423960 CECR2Q9BXF3 1484 aa31.88■■■□□ 2.69
FOXN4-203ENST00000423960 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
FOXN4-203ENST00000423960 SMARCA4P51532 1647 aa31.26■■■□□ 2.59
FOXN4-203ENST00000423960 MROH2BQ7Z745 1585 aa31.18■■■□□ 2.58
FOXN4-203ENST00000423960 NCAPD3P42695 1498 aa31.13■■■□□ 2.57
FOXN4-203ENST00000423960 ATAD2BQ9ULI0 1458 aa31.12■■■□□ 2.57
FOXN4-203ENST00000423960 SMARCA2P51531 1590 aa31.01■■■□□ 2.56
FOXN4-203ENST00000423960 RSF1Q96T23 1441 aaPredicted RBP30.99■■■□□ 2.55
FOXN4-203ENST00000423960 PEG3Q9GZU2 1588 aa30.94■■■□□ 2.54
FOXN4-203ENST00000423960 HMGXB3Q12766 1538 aa30.9■■■□□ 2.54
FOXN4-203ENST00000423960 BAZ1BQ9UIG0 1483 aaKnown RBP30.84■■■□□ 2.53
FOXN4-203ENST00000423960 WIZO95785 1651 aa30.83■■■□□ 2.53
FOXN4-203ENST00000423960 SUPT5HO00267 1087 aaKnown RBP30.58■■■□□ 2.49
FOXN4-203ENST00000423960 NESP48681 1621 aa30.58■■■□□ 2.49
FOXN4-203ENST00000423960 ERCC6Q03468 1493 aa30.57■■■□□ 2.48
FOXN4-203ENST00000423960 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
FOXN4-203ENST00000423960 LAMC3Q9Y6N6 1575 aa30.32■■■□□ 2.45
FOXN4-203ENST00000423960 CUX2O14529 1486 aa30.31■■■□□ 2.44
FOXN4-203ENST00000423960 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
FOXN4-203ENST00000423960 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
FOXN4-203ENST00000423960 PDS5BQ9NTI5 1447 aa30.2■■■□□ 2.42
FOXN4-203ENST00000423960 KIF21AQ7Z4S6 1674 aa30.09■■■□□ 2.41
FOXN4-203ENST00000423960 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
FOXN4-203ENST00000423960 CFTRP13569 1480 aa30■■■□□ 2.39
FOXN4-203ENST00000423960 DNAJC5Q9H3Z4 198 aa29.92■■■□□ 2.38
FOXN4-203ENST00000423960 MRC2Q9UBG0 1479 aa29.91■■■□□ 2.38
FOXN4-203ENST00000423960 FANCD2Q9BXW9 1451 aa29.89■■■□□ 2.38
FOXN4-203ENST00000423960 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
FOXN4-203ENST00000423960 WDR62O43379 1518 aa29.79■■■□□ 2.36
FOXN4-203ENST00000423960 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
FOXN4-203ENST00000423960 URB2Q14146 1524 aaKnown RBP29.62■■■□□ 2.33
FOXN4-203ENST00000423960 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
FOXN4-203ENST00000423960 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
FOXN4-203ENST00000423960 DNMBPQ6XZF7 1577 aa29.28■■■□□ 2.28
FOXN4-203ENST00000423960 IFT140Q96RY7 1462 aa29.26■■■□□ 2.27
FOXN4-203ENST00000423960 CUX1P39880 1505 aa29.22■■■□□ 2.27
FOXN4-203ENST00000423960 ZNF608Q9ULD9 1512 aaPredicted RBP29.22■■■□□ 2.27
FOXN4-203ENST00000423960 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
FOXN4-203ENST00000423960 POLA1P09884 1462 aaPredicted RBP29.1■■■□□ 2.25
FOXN4-203ENST00000423960 OSCARQ8IYS5 282 aa29.08■■■□□ 2.25
FOXN4-203ENST00000423960 FGD5Q6ZNL6 1462 aa29.07■■■□□ 2.24
FOXN4-203ENST00000423960 SYNJ1O43426 1573 aa29.05■■■□□ 2.24
FOXN4-203ENST00000423960 TOP2BQ02880 1626 aa29.04■■■□□ 2.24
FOXN4-203ENST00000423960 SOGA1O94964 1423 aa29.03■■■□□ 2.24
FOXN4-203ENST00000423960 TARBP1Q13395 1621 aaKnown RBP29.03■■■□□ 2.24
FOXN4-203ENST00000423960 RAD54L2Q9Y4B4 1467 aa29.03■■■□□ 2.24
FOXN4-203ENST00000423960 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.24
FOXN4-203ENST00000423960 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.24
FOXN4-203ENST00000423960 BIVM-ERCC5R4GMW8 1640 aa29.01■■■□□ 2.23
FOXN4-203ENST00000423960 TDRD9Q8NDG6 1382 aaKnown RBP28.93■■■□□ 2.22
FOXN4-203ENST00000423960 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
FOXN4-203ENST00000423960 ABCA10Q8WWZ4 1543 aa28.81■■■□□ 2.2
FOXN4-203ENST00000423960 FBLN2P98095 1184 aa28.81■■■□□ 2.2
FOXN4-203ENST00000423960 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
FOXN4-203ENST00000423960 WDR97A6NE52 1622 aa28.71■■■□□ 2.19
FOXN4-203ENST00000423960 SNAPC4Q5SXM2 1469 aa28.71■■■□□ 2.19
FOXN4-203ENST00000423960 CHD1O14646 1710 aa28.68■■■□□ 2.18
FOXN4-203ENST00000423960 GAPVD1Q14C86 1478 aa28.67■■■□□ 2.18
FOXN4-203ENST00000423960 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
FOXN4-203ENST00000423960 CHMP7Q8WUX9 453 aaPredicted RBP28.62■■■□□ 2.17
FOXN4-203ENST00000423960 MAGI1Q96QZ7 1491 aaPredicted RBP28.6■■■□□ 2.17
FOXN4-203ENST00000423960 ABCA5Q8WWZ7 1642 aa28.6■■■□□ 2.17
FOXN4-203ENST00000423960 KIF27Q86VH2 1401 aa28.59■■■□□ 2.17
FOXN4-203ENST00000423960 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
FOXN4-203ENST00000423960 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
FOXN4-203ENST00000423960 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
FOXN4-203ENST00000423960 ARHGEF11O15085 1522 aa28.57■■■□□ 2.16
FOXN4-203ENST00000423960 SYNJ2O15056 1496 aa28.53■■■□□ 2.16
FOXN4-203ENST00000423960 PBRM1Q86U86 1689 aa28.5■■■□□ 2.15
FOXN4-203ENST00000423960 ERICH3Q5RHP9 1530 aa28.46■■■□□ 2.15
FOXN4-203ENST00000423960 IGF1RP08069 1367 aa28.46■■■□□ 2.15
FOXN4-203ENST00000423960 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
FOXN4-203ENST00000423960 CYB5RLQ6IPT4 315 aa28.42■■■□□ 2.14
FOXN4-203ENST00000423960 CLASP1Q7Z460 1538 aa28.4■■■□□ 2.14
FOXN4-203ENST00000423960 FHAD1B1AJZ9 1412 aa28.36■■■□□ 2.13
FOXN4-203ENST00000423960 ARAP1Q96P48 1450 aa28.33■■■□□ 2.13
FOXN4-203ENST00000423960 ADAMTS12P58397 1594 aa28.3■■■□□ 2.12
FOXN4-203ENST00000423960 GRIN2AQ12879 1464 aa28.29■■■□□ 2.12
FOXN4-203ENST00000423960 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
FOXN4-203ENST00000423960 EEA1Q15075 1411 aa28.27■■■□□ 2.12
FOXN4-203ENST00000423960 FAM9AQ8IZU1 332 aaPredicted RBP28.26■■■□□ 2.11
FOXN4-203ENST00000423960 CSRNP3Q8WYN3 585 aa28.26■■■□□ 2.11
FOXN4-203ENST00000423960 CUL7Q14999 1698 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms