RNA–Protein interactions for RNA: ENST00000423927.2

KNTC1-203, Transcript of kinetochore associated 1, humanhuman

TSL 4

Gene KNTC1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-203ENST00000423927 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
KNTC1-203ENST00000423927 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
KNTC1-203ENST00000423927 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
KNTC1-203ENST00000423927 ABCC9O60706 1549 aa20.08■□□□□ 0.81
KNTC1-203ENST00000423927 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
KNTC1-203ENST00000423927 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
KNTC1-203ENST00000423927 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
KNTC1-203ENST00000423927 CCDC180Q9P1Z9 1646 aa19.4■□□□□ 0.7
KNTC1-203ENST00000423927 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
KNTC1-203ENST00000423927 FOXD1Q16676 465 aa18.71■□□□□ 0.59
KNTC1-203ENST00000423927 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
KNTC1-203ENST00000423927 DNAJC5Q9H3Z4 198 aa18.5■□□□□ 0.55
KNTC1-203ENST00000423927 NACADO15069 1562 aa18.5■□□□□ 0.55
KNTC1-203ENST00000423927 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
KNTC1-203ENST00000423927 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
KNTC1-203ENST00000423927 DCAF8L2P0C7V8 631 aa18.31■□□□□ 0.52
KNTC1-203ENST00000423927 BICRAQ9NZM4 1560 aa18.22■□□□□ 0.51
KNTC1-203ENST00000423927 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
KNTC1-203ENST00000423927 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
KNTC1-203ENST00000423927 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
KNTC1-203ENST00000423927 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
KNTC1-203ENST00000423927 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
KNTC1-203ENST00000423927 MSH5O43196 834 aa17.77■□□□□ 0.44
KNTC1-203ENST00000423927 CUX2O14529 1486 aa17.64■□□□□ 0.41
KNTC1-203ENST00000423927 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
KNTC1-203ENST00000423927 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
KNTC1-203ENST00000423927 DCAF1Q9Y4B6 1507 aa17.44■□□□□ 0.38
KNTC1-203ENST00000423927 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
KNTC1-203ENST00000423927 ZCCHC6Q5VYS8 1495 aaKnown RBP17.35■□□□□ 0.37
KNTC1-203ENST00000423927 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
KNTC1-203ENST00000423927 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
KNTC1-203ENST00000423927 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
KNTC1-203ENST00000423927 NESP48681 1621 aa17■□□□□ 0.31
KNTC1-203ENST00000423927 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
KNTC1-203ENST00000423927 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
KNTC1-203ENST00000423927 ADRA2BP18089 450 aa16.91■□□□□ 0.3
KNTC1-203ENST00000423927 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
KNTC1-203ENST00000423927 SMARCA2P51531 1590 aa16.87■□□□□ 0.29
KNTC1-203ENST00000423927 HMGXB3Q12766 1538 aa16.86■□□□□ 0.29
KNTC1-203ENST00000423927 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
KNTC1-203ENST00000423927 LAMC3Q9Y6N6 1575 aa16.83■□□□□ 0.28
KNTC1-203ENST00000423927 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
KNTC1-203ENST00000423927 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
KNTC1-203ENST00000423927 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
KNTC1-203ENST00000423927 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
KNTC1-203ENST00000423927 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
KNTC1-203ENST00000423927 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
KNTC1-203ENST00000423927 WDR62O43379 1518 aa16.6■□□□□ 0.25
KNTC1-203ENST00000423927 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
KNTC1-203ENST00000423927 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
KNTC1-203ENST00000423927 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
KNTC1-203ENST00000423927 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
KNTC1-203ENST00000423927 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
KNTC1-203ENST00000423927 CADPSQ9ULU8 1353 aa16.5■□□□□ 0.23
KNTC1-203ENST00000423927 CEP164Q9UPV0 1460 aa16.43■□□□□ 0.22
KNTC1-203ENST00000423927 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
KNTC1-203ENST00000423927 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
KNTC1-203ENST00000423927 FANCD2Q9BXW9 1451 aa16.32■□□□□ 0.2
KNTC1-203ENST00000423927 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
KNTC1-203ENST00000423927 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
KNTC1-203ENST00000423927 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
KNTC1-203ENST00000423927 CFTRP13569 1480 aa16.14■□□□□ 0.17
KNTC1-203ENST00000423927 CHD1O14646 1710 aa16.14■□□□□ 0.17
KNTC1-203ENST00000423927 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
KNTC1-203ENST00000423927 ZNF608Q9ULD9 1512 aaPredicted RBP16.12■□□□□ 0.17
KNTC1-203ENST00000423927 WIZO95785 1651 aa16.11■□□□□ 0.17
KNTC1-203ENST00000423927 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
KNTC1-203ENST00000423927 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
KNTC1-203ENST00000423927 FBLN2P98095 1184 aa16.04■□□□□ 0.16
KNTC1-203ENST00000423927 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
KNTC1-203ENST00000423927 ILDR1Q86SU0 546 aaPredicted RBP15.94■□□□□ 0.14
KNTC1-203ENST00000423927 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
KNTC1-203ENST00000423927 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
KNTC1-203ENST00000423927 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.14
KNTC1-203ENST00000423927 SYNJ1O43426 1573 aa15.83■□□□□ 0.13
KNTC1-203ENST00000423927 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
KNTC1-203ENST00000423927 TOP2AP11388 1531 aaKnown RBP15.83■□□□□ 0.12
KNTC1-203ENST00000423927 CLASP1Q7Z460 1538 aa15.83■□□□□ 0.12
KNTC1-203ENST00000423927 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
KNTC1-203ENST00000423927 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
KNTC1-203ENST00000423927 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
KNTC1-203ENST00000423927 GAPVD1Q14C86 1478 aa15.76■□□□□ 0.11
KNTC1-203ENST00000423927 SNAPC4Q5SXM2 1469 aa15.72■□□□□ 0.11
KNTC1-203ENST00000423927 MAPK8IP2Q13387 824 aaPredicted RBP15.71■□□□□ 0.11
KNTC1-203ENST00000423927 TDRD9Q8NDG6 1382 aaKnown RBP15.7■□□□□ 0.1
KNTC1-203ENST00000423927 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
KNTC1-203ENST00000423927 KIF13AQ9H1H9 1805 aa15.68■□□□□ 0.1
KNTC1-203ENST00000423927 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
KNTC1-203ENST00000423927 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
KNTC1-203ENST00000423927 SOGA1O94964 1423 aa15.66■□□□□ 0.1
KNTC1-203ENST00000423927 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
KNTC1-203ENST00000423927 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
KNTC1-203ENST00000423927 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
KNTC1-203ENST00000423927 GRIN2BQ13224 1484 aa15.6■□□□□ 0.09
KNTC1-203ENST00000423927 KDM4FA0A1W2PPD8 638 aa15.6■□□□□ 0.09
KNTC1-203ENST00000423927 CACNB1Q02641 598 aaPredicted RBP15.59■□□□□ 0.09
KNTC1-203ENST00000423927 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
KNTC1-203ENST00000423927 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
KNTC1-203ENST00000423927 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
KNTC1-203ENST00000423927 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms