RNA–Protein interactions for RNA: ENST00000423855.6

RNPC3-201, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RNPC3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-201ENST00000423855 NISCHQ9Y2I1 1504 aa21.84■■□□□ 1.09
RNPC3-201ENST00000423855 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
RNPC3-201ENST00000423855 ABCC9O60706 1549 aa18.37■□□□□ 0.53
RNPC3-201ENST00000423855 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
RNPC3-201ENST00000423855 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
RNPC3-201ENST00000423855 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
RNPC3-201ENST00000423855 DCAF8L2P0C7V8 631 aa17.95■□□□□ 0.46
RNPC3-201ENST00000423855 NACADO15069 1562 aa17.93■□□□□ 0.46
RNPC3-201ENST00000423855 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
RNPC3-201ENST00000423855 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
RNPC3-201ENST00000423855 UNC13AQ9UPW8 1703 aa17.59■□□□□ 0.41
RNPC3-201ENST00000423855 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
RNPC3-201ENST00000423855 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
RNPC3-201ENST00000423855 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
RNPC3-201ENST00000423855 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
RNPC3-201ENST00000423855 BAZ1AQ9NRL2 1556 aaPredicted RBP16.88■□□□□ 0.29
RNPC3-201ENST00000423855 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
RNPC3-201ENST00000423855 MROH2BQ7Z745 1585 aa16.86■□□□□ 0.29
RNPC3-201ENST00000423855 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
RNPC3-201ENST00000423855 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
RNPC3-201ENST00000423855 WIZO95785 1651 aa16.73■□□□□ 0.27
RNPC3-201ENST00000423855 PEG3Q9GZU2 1588 aa16.7■□□□□ 0.26
RNPC3-201ENST00000423855 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
RNPC3-201ENST00000423855 SUPT5HO00267 1087 aaKnown RBP16.66■□□□□ 0.26
RNPC3-201ENST00000423855 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
RNPC3-201ENST00000423855 SMARCA2P51531 1590 aa16.62■□□□□ 0.25
RNPC3-201ENST00000423855 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
RNPC3-201ENST00000423855 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
RNPC3-201ENST00000423855 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
RNPC3-201ENST00000423855 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
RNPC3-201ENST00000423855 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
RNPC3-201ENST00000423855 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
RNPC3-201ENST00000423855 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
RNPC3-201ENST00000423855 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
RNPC3-201ENST00000423855 CFTRP13569 1480 aa16.09■□□□□ 0.17
RNPC3-201ENST00000423855 NESP48681 1621 aa16.06■□□□□ 0.16
RNPC3-201ENST00000423855 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
RNPC3-201ENST00000423855 LAMC3Q9Y6N6 1575 aa16.05■□□□□ 0.16
RNPC3-201ENST00000423855 KIF21AQ7Z4S6 1674 aa15.92■□□□□ 0.14
RNPC3-201ENST00000423855 ABCC8Q09428 1581 aa15.92■□□□□ 0.14
RNPC3-201ENST00000423855 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
RNPC3-201ENST00000423855 PDS5BQ9NTI5 1447 aa15.87■□□□□ 0.13
RNPC3-201ENST00000423855 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
RNPC3-201ENST00000423855 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
RNPC3-201ENST00000423855 CHIC1Q5VXU3 224 aa15.82■□□□□ 0.12
RNPC3-201ENST00000423855 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
RNPC3-201ENST00000423855 CUX1P39880 1505 aa15.8■□□□□ 0.12
RNPC3-201ENST00000423855 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
RNPC3-201ENST00000423855 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
RNPC3-201ENST00000423855 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
RNPC3-201ENST00000423855 ERCC6Q03468 1493 aa15.75■□□□□ 0.11
RNPC3-201ENST00000423855 DNMBPQ6XZF7 1577 aa15.74■□□□□ 0.11
RNPC3-201ENST00000423855 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
RNPC3-201ENST00000423855 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
RNPC3-201ENST00000423855 TOPBP1Q92547 1522 aa15.72■□□□□ 0.11
RNPC3-201ENST00000423855 WDR62O43379 1518 aa15.69■□□□□ 0.1
RNPC3-201ENST00000423855 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
RNPC3-201ENST00000423855 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
RNPC3-201ENST00000423855 POLA1P09884 1462 aaPredicted RBP15.62■□□□□ 0.09
RNPC3-201ENST00000423855 WDR97A6NE52 1622 aa15.57■□□□□ 0.08
RNPC3-201ENST00000423855 CUX2O14529 1486 aa15.56■□□□□ 0.08
RNPC3-201ENST00000423855 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
RNPC3-201ENST00000423855 RAD54L2Q9Y4B4 1467 aa15.55■□□□□ 0.08
RNPC3-201ENST00000423855 SOGA1O94964 1423 aa15.52■□□□□ 0.08
RNPC3-201ENST00000423855 ABCA10Q8WWZ4 1543 aa15.5■□□□□ 0.07
RNPC3-201ENST00000423855 RUSC2Q8N2Y8 1516 aa15.5■□□□□ 0.07
RNPC3-201ENST00000423855 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
RNPC3-201ENST00000423855 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.07
RNPC3-201ENST00000423855 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
RNPC3-201ENST00000423855 KIF27Q86VH2 1401 aa15.42■□□□□ 0.06
RNPC3-201ENST00000423855 EEA1Q15075 1411 aa15.41■□□□□ 0.06
RNPC3-201ENST00000423855 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
RNPC3-201ENST00000423855 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
RNPC3-201ENST00000423855 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
RNPC3-201ENST00000423855 FAM9AQ8IZU1 332 aaPredicted RBP15.38■□□□□ 0.05
RNPC3-201ENST00000423855 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
RNPC3-201ENST00000423855 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
RNPC3-201ENST00000423855 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
RNPC3-201ENST00000423855 IGF1RP08069 1367 aa15.31■□□□□ 0.04
RNPC3-201ENST00000423855 KIF21BO75037 1637 aa15.3■□□□□ 0.04
RNPC3-201ENST00000423855 CUL7Q14999 1698 aa15.3■□□□□ 0.04
RNPC3-201ENST00000423855 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
RNPC3-201ENST00000423855 GRIN2BQ13224 1484 aa15.29■□□□□ 0.04
RNPC3-201ENST00000423855 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
RNPC3-201ENST00000423855 ADAMTS12P58397 1594 aa15.27■□□□□ 0.04
RNPC3-201ENST00000423855 SNAPC4Q5SXM2 1469 aa15.24■□□□□ 0.03
RNPC3-201ENST00000423855 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
RNPC3-201ENST00000423855 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
RNPC3-201ENST00000423855 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
RNPC3-201ENST00000423855 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
RNPC3-201ENST00000423855 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
RNPC3-201ENST00000423855 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
RNPC3-201ENST00000423855 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
RNPC3-201ENST00000423855 SYNJ2O15056 1496 aa15.15■□□□□ 0.02
RNPC3-201ENST00000423855 CHD1O14646 1710 aa15.14■□□□□ 0.01
RNPC3-201ENST00000423855 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
RNPC3-201ENST00000423855 CTTNBP2Q8WZ74 1663 aa15.11■□□□□ 0.01
RNPC3-201ENST00000423855 CEP170Q5SW79 1584 aa15.07■□□□□ 0
RNPC3-201ENST00000423855 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
RNPC3-201ENST00000423855 UBTFP17480 764 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms