RNA–Protein interactions for RNA: ENST00000423785.5

NEK6-207, Transcript of NIMA related kinase 6, humanhuman

TSL 5

Gene NEK6, Length 726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-207ENST00000423785 NISCHQ9Y2I1 1504 aa31.11■■■□□ 2.57
NEK6-207ENST00000423785 ABCC9O60706 1549 aa28.34■■■□□ 2.13
NEK6-207ENST00000423785 CCDC180Q9P1Z9 1646 aa27.99■■■□□ 2.07
NEK6-207ENST00000423785 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
NEK6-207ENST00000423785 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
NEK6-207ENST00000423785 NACADO15069 1562 aa26.54■■□□□ 1.84
NEK6-207ENST00000423785 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
NEK6-207ENST00000423785 PABPN1Q86U42 306 aaKnown RBP eCLIP26.37■■□□□ 1.81
NEK6-207ENST00000423785 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
NEK6-207ENST00000423785 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
NEK6-207ENST00000423785 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
NEK6-207ENST00000423785 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
NEK6-207ENST00000423785 DCAF1Q9Y4B6 1507 aa25.64■■□□□ 1.7
NEK6-207ENST00000423785 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
NEK6-207ENST00000423785 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
NEK6-207ENST00000423785 CC2D2AQ9P2K1 1620 aa25.55■■□□□ 1.68
NEK6-207ENST00000423785 CECR2Q9BXF3 1484 aa25.54■■□□□ 1.68
NEK6-207ENST00000423785 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
NEK6-207ENST00000423785 DNAJC5Q9H3Z4 198 aa24.81■■□□□ 1.56
NEK6-207ENST00000423785 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
NEK6-207ENST00000423785 CUX2O14529 1486 aa24.48■■□□□ 1.51
NEK6-207ENST00000423785 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
NEK6-207ENST00000423785 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
NEK6-207ENST00000423785 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
NEK6-207ENST00000423785 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
NEK6-207ENST00000423785 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
NEK6-207ENST00000423785 NESP48681 1621 aa24.28■■□□□ 1.48
NEK6-207ENST00000423785 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
NEK6-207ENST00000423785 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
NEK6-207ENST00000423785 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
NEK6-207ENST00000423785 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
NEK6-207ENST00000423785 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
NEK6-207ENST00000423785 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
NEK6-207ENST00000423785 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
NEK6-207ENST00000423785 PDS5BQ9NTI5 1447 aa23.88■■□□□ 1.41
NEK6-207ENST00000423785 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
NEK6-207ENST00000423785 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
NEK6-207ENST00000423785 WIZO95785 1651 aa23.69■■□□□ 1.38
NEK6-207ENST00000423785 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
NEK6-207ENST00000423785 WDR62O43379 1518 aa23.64■■□□□ 1.38
NEK6-207ENST00000423785 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
NEK6-207ENST00000423785 FANCD2Q9BXW9 1451 aa23.51■■□□□ 1.35
NEK6-207ENST00000423785 CFTRP13569 1480 aa23.44■■□□□ 1.34
NEK6-207ENST00000423785 RSF1Q96T23 1441 aaPredicted RBP23.4■■□□□ 1.34
NEK6-207ENST00000423785 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
NEK6-207ENST00000423785 URB2Q14146 1524 aaKnown RBP23.35■■□□□ 1.33
NEK6-207ENST00000423785 OSCARQ8IYS5 282 aa23.34■■□□□ 1.33
NEK6-207ENST00000423785 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
NEK6-207ENST00000423785 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
NEK6-207ENST00000423785 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
NEK6-207ENST00000423785 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
NEK6-207ENST00000423785 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.28
NEK6-207ENST00000423785 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.28
NEK6-207ENST00000423785 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.28
NEK6-207ENST00000423785 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
NEK6-207ENST00000423785 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
NEK6-207ENST00000423785 EIF4G3O43432 1585 aaKnown RBP22.95■■□□□ 1.26
NEK6-207ENST00000423785 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
NEK6-207ENST00000423785 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
NEK6-207ENST00000423785 AQRO60306 1485 aaKnown RBP eCLIP22.88■■□□□ 1.252e-7■□□□□ 10.1
NEK6-207ENST00000423785 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
NEK6-207ENST00000423785 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
NEK6-207ENST00000423785 CHD1O14646 1710 aa22.83■■□□□ 1.25
NEK6-207ENST00000423785 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
NEK6-207ENST00000423785 FBLN2P98095 1184 aa22.79■■□□□ 1.24
NEK6-207ENST00000423785 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
NEK6-207ENST00000423785 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
NEK6-207ENST00000423785 TDRD9Q8NDG6 1382 aaKnown RBP22.7■■□□□ 1.22
NEK6-207ENST00000423785 SOGA1O94964 1423 aa22.68■■□□□ 1.22
NEK6-207ENST00000423785 TRHP20396 242 aaPredicted RBP22.68■■□□□ 1.22
NEK6-207ENST00000423785 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
NEK6-207ENST00000423785 FGD5Q6ZNL6 1462 aa22.61■■□□□ 1.21
NEK6-207ENST00000423785 CLASP1Q7Z460 1538 aa22.56■■□□□ 1.2
NEK6-207ENST00000423785 CHMP7Q8WUX9 453 aaPredicted RBP22.55■■□□□ 1.2
NEK6-207ENST00000423785 CUX1P39880 1505 aa22.55■■□□□ 1.2
NEK6-207ENST00000423785 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
NEK6-207ENST00000423785 MAGI1Q96QZ7 1491 aaPredicted RBP22.52■■□□□ 1.2
NEK6-207ENST00000423785 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
NEK6-207ENST00000423785 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
NEK6-207ENST00000423785 SYNJ2O15056 1496 aa22.46■■□□□ 1.19
NEK6-207ENST00000423785 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
NEK6-207ENST00000423785 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
NEK6-207ENST00000423785 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
NEK6-207ENST00000423785 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
NEK6-207ENST00000423785 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
NEK6-207ENST00000423785 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
NEK6-207ENST00000423785 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
NEK6-207ENST00000423785 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
NEK6-207ENST00000423785 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
NEK6-207ENST00000423785 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
NEK6-207ENST00000423785 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
NEK6-207ENST00000423785 NUP160Q12769 1436 aa22.15■■□□□ 1.14
NEK6-207ENST00000423785 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
NEK6-207ENST00000423785 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
NEK6-207ENST00000423785 BIVM-ERCC5R4GMW8 1640 aa22.09■■□□□ 1.13
NEK6-207ENST00000423785 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
NEK6-207ENST00000423785 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
NEK6-207ENST00000423785 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
NEK6-207ENST00000423785 JPH4Q96JJ6 628 aa21.94■■□□□ 1.1
NEK6-207ENST00000423785 KIF13AQ9H1H9 1805 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms