RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 NISCHQ9Y2I1 1504 aa41.7■■■■■ 4.27
CCDC78-203ENST00000423653 CCDC180Q9P1Z9 1646 aa37.42■■■■□ 3.58
CCDC78-203ENST00000423653 ABCC9O60706 1549 aa37■■■■□ 3.51
CCDC78-203ENST00000423653 RB1CC1Q8TDY2 1594 aa35.45■■■■□ 3.27
CCDC78-203ENST00000423653 NACADO15069 1562 aa35.26■■■■□ 3.24
CCDC78-203ENST00000423653 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
CCDC78-203ENST00000423653 MYO15BQ96JP2 1530 aa34.89■■■■□ 3.18
CCDC78-203ENST00000423653 ZCCHC6Q5VYS8 1495 aaKnown RBP34.66■■■■□ 3.14
CCDC78-203ENST00000423653 UNC13AQ9UPW8 1703 aa34.59■■■■□ 3.13
CCDC78-203ENST00000423653 DCAF1Q9Y4B6 1507 aa34.53■■■■□ 3.12
CCDC78-203ENST00000423653 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
CCDC78-203ENST00000423653 BICRAQ9NZM4 1560 aa34.31■■■■□ 3.08
CCDC78-203ENST00000423653 DNAJC5BQ9UF47 199 aa34.29■■■■□ 3.08
CCDC78-203ENST00000423653 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
CCDC78-203ENST00000423653 SCRIBQ14160 1630 aa34.03■■■■□ 3.04
CCDC78-203ENST00000423653 EIF4G1Q04637 1599 aaKnown RBP33.49■■■□□ 2.95
CCDC78-203ENST00000423653 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
CCDC78-203ENST00000423653 CECR2Q9BXF3 1484 aa33.33■■■□□ 2.93
CCDC78-203ENST00000423653 SMARCA4P51532 1647 aa32.51■■■□□ 2.79
CCDC78-203ENST00000423653 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
CCDC78-203ENST00000423653 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
CCDC78-203ENST00000423653 ATAD2BQ9ULI0 1458 aa32.42■■■□□ 2.78
CCDC78-203ENST00000423653 BAZ1AQ9NRL2 1556 aaPredicted RBP32.41■■■□□ 2.78
CCDC78-203ENST00000423653 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
CCDC78-203ENST00000423653 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
CCDC78-203ENST00000423653 BAZ1BQ9UIG0 1483 aaKnown RBP32.17■■■□□ 2.74
CCDC78-203ENST00000423653 MROH2BQ7Z745 1585 aa32.1■■■□□ 2.73
CCDC78-203ENST00000423653 ERCC6Q03468 1493 aa32■■■□□ 2.71
CCDC78-203ENST00000423653 CUX2O14529 1486 aa31.87■■■□□ 2.69
CCDC78-203ENST00000423653 NESP48681 1621 aa31.83■■■□□ 2.69
CCDC78-203ENST00000423653 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
CCDC78-203ENST00000423653 WIZO95785 1651 aa31.73■■■□□ 2.67
CCDC78-203ENST00000423653 THOC2Q8NI27 1593 aaKnown RBP31.56■■■□□ 2.64
CCDC78-203ENST00000423653 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
CCDC78-203ENST00000423653 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
CCDC78-203ENST00000423653 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.64
CCDC78-203ENST00000423653 CADPSQ9ULU8 1353 aa31.5■■■□□ 2.63
CCDC78-203ENST00000423653 TOP2AP11388 1531 aaKnown RBP31.44■■■□□ 2.62
CCDC78-203ENST00000423653 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
CCDC78-203ENST00000423653 MRC2Q9UBG0 1479 aa31.27■■■□□ 2.6
CCDC78-203ENST00000423653 CFTRP13569 1480 aa31.22■■■□□ 2.59
CCDC78-203ENST00000423653 CEP164Q9UPV0 1460 aa31.22■■■□□ 2.59
CCDC78-203ENST00000423653 WDR62O43379 1518 aa31.19■■■□□ 2.58
CCDC78-203ENST00000423653 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
CCDC78-203ENST00000423653 PRDM2Q13029 1718 aa31.05■■■□□ 2.56
CCDC78-203ENST00000423653 CCDC88BA6NC98 1476 aa30.98■■■□□ 2.55
CCDC78-203ENST00000423653 URB2Q14146 1524 aaKnown RBP30.87■■■□□ 2.53
CCDC78-203ENST00000423653 ABCC8Q09428 1581 aa30.62■■■□□ 2.49
CCDC78-203ENST00000423653 TOPBP1Q92547 1522 aa30.61■■■□□ 2.49
CCDC78-203ENST00000423653 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
CCDC78-203ENST00000423653 DNMBPQ6XZF7 1577 aa30.57■■■□□ 2.48
CCDC78-203ENST00000423653 ZNF608Q9ULD9 1512 aaPredicted RBP30.42■■■□□ 2.46
CCDC78-203ENST00000423653 EIF4G3O43432 1585 aaKnown RBP30.37■■■□□ 2.45
CCDC78-203ENST00000423653 OSCARQ8IYS5 282 aa30.34■■■□□ 2.45
CCDC78-203ENST00000423653 TARBP1Q13395 1621 aaKnown RBP30.32■■■□□ 2.44
CCDC78-203ENST00000423653 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
CCDC78-203ENST00000423653 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.43
CCDC78-203ENST00000423653 CUX1P39880 1505 aa30.17■■■□□ 2.42
CCDC78-203ENST00000423653 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
CCDC78-203ENST00000423653 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.42
CCDC78-203ENST00000423653 WDR97A6NE52 1622 aa30.15■■■□□ 2.42
CCDC78-203ENST00000423653 SOGA1O94964 1423 aa30.14■■■□□ 2.42
CCDC78-203ENST00000423653 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
CCDC78-203ENST00000423653 TRIM41Q8WV44 630 aa30.13■■■□□ 2.41
CCDC78-203ENST00000423653 CHD1O14646 1710 aa30.07■■■□□ 2.4
CCDC78-203ENST00000423653 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
CCDC78-203ENST00000423653 RIMBP3CA6NJZ7 1639 aa29.99■■■□□ 2.39
CCDC78-203ENST00000423653 RIMBP3BA6NNM3 1639 aa29.99■■■□□ 2.39
CCDC78-203ENST00000423653 RIMBP3Q9UFD9 1639 aa29.99■■■□□ 2.39
CCDC78-203ENST00000423653 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
CCDC78-203ENST00000423653 ARHGEF11O15085 1522 aa29.93■■■□□ 2.38
CCDC78-203ENST00000423653 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
CCDC78-203ENST00000423653 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
CCDC78-203ENST00000423653 FBLN2P98095 1184 aa29.9■■■□□ 2.38
CCDC78-203ENST00000423653 ABCA10Q8WWZ4 1543 aa29.86■■■□□ 2.37
CCDC78-203ENST00000423653 PBRM1Q86U86 1689 aa29.85■■■□□ 2.37
CCDC78-203ENST00000423653 BIVM-ERCC5R4GMW8 1640 aa29.82■■■□□ 2.36
CCDC78-203ENST00000423653 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
CCDC78-203ENST00000423653 ABCA5Q8WWZ7 1642 aa29.82■■■□□ 2.36
CCDC78-203ENST00000423653 TOP2BQ02880 1626 aa29.81■■■□□ 2.36
CCDC78-203ENST00000423653 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
CCDC78-203ENST00000423653 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
CCDC78-203ENST00000423653 SYNJ2O15056 1496 aa29.78■■■□□ 2.36
CCDC78-203ENST00000423653 CHMP7Q8WUX9 453 aaPredicted RBP29.75■■■□□ 2.35
CCDC78-203ENST00000423653 CLASP1Q7Z460 1538 aa29.73■■■□□ 2.35
CCDC78-203ENST00000423653 ARAP1Q96P48 1450 aa29.64■■■□□ 2.34
CCDC78-203ENST00000423653 ADAMTS12P58397 1594 aa29.59■■■□□ 2.33
CCDC78-203ENST00000423653 CYB5RLQ6IPT4 315 aa29.58■■■□□ 2.33
CCDC78-203ENST00000423653 GRIN2AQ12879 1464 aa29.53■■■□□ 2.32
CCDC78-203ENST00000423653 ERICH3Q5RHP9 1530 aa29.52■■■□□ 2.32
CCDC78-203ENST00000423653 FHAD1B1AJZ9 1412 aa29.46■■■□□ 2.31
CCDC78-203ENST00000423653 NUP160Q12769 1436 aa29.4■■■□□ 2.3
CCDC78-203ENST00000423653 CEP170Q5SW79 1584 aa29.39■■■□□ 2.3
CCDC78-203ENST00000423653 SHROOM2Q13796 1616 aa29.27■■■□□ 2.28
CCDC78-203ENST00000423653 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
CCDC78-203ENST00000423653 TRHP20396 242 aaPredicted RBP29.2■■■□□ 2.26
CCDC78-203ENST00000423653 ERCC6L2Q5T890 1561 aa29.2■■■□□ 2.26
CCDC78-203ENST00000423653 CUL7Q14999 1698 aa29.18■■■□□ 2.26
CCDC78-203ENST00000423653 RUSC2Q8N2Y8 1516 aa29.16■■■□□ 2.26
CCDC78-203ENST00000423653 IGF1RP08069 1367 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms