RNA–Protein interactions for RNA: ENST00000423566.6

AP3S2-202, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-202ENST00000423566 NISCHQ9Y2I1 1504 aa25.61■■□□□ 1.69
AP3S2-202ENST00000423566 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
AP3S2-202ENST00000423566 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
AP3S2-202ENST00000423566 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1
AP3S2-202ENST00000423566 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
AP3S2-202ENST00000423566 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
AP3S2-202ENST00000423566 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
AP3S2-202ENST00000423566 NACADO15069 1562 aa20.7■□□□□ 0.9
AP3S2-202ENST00000423566 ABCC9O60706 1549 aa20.6■□□□□ 0.89
AP3S2-202ENST00000423566 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
AP3S2-202ENST00000423566 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
AP3S2-202ENST00000423566 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
AP3S2-202ENST00000423566 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
AP3S2-202ENST00000423566 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
AP3S2-202ENST00000423566 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
AP3S2-202ENST00000423566 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
AP3S2-202ENST00000423566 MROH2BQ7Z745 1585 aa19.7■□□□□ 0.74
AP3S2-202ENST00000423566 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
AP3S2-202ENST00000423566 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
AP3S2-202ENST00000423566 SMARCA4P51532 1647 aa19.56■□□□□ 0.72
AP3S2-202ENST00000423566 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
AP3S2-202ENST00000423566 WIZO95785 1651 aa19.46■□□□□ 0.71
AP3S2-202ENST00000423566 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
AP3S2-202ENST00000423566 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
AP3S2-202ENST00000423566 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
AP3S2-202ENST00000423566 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
AP3S2-202ENST00000423566 CCDC88BA6NC98 1476 aa19.21■□□□□ 0.67
AP3S2-202ENST00000423566 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
AP3S2-202ENST00000423566 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
AP3S2-202ENST00000423566 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
AP3S2-202ENST00000423566 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
AP3S2-202ENST00000423566 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
AP3S2-202ENST00000423566 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
AP3S2-202ENST00000423566 EEA1Q15075 1411 aa18.82■□□□□ 0.6
AP3S2-202ENST00000423566 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
AP3S2-202ENST00000423566 LOC105371045A0A1W2PR82 267 aa18.76■□□□□ 0.59
AP3S2-202ENST00000423566 ABCC8Q09428 1581 aa18.74■□□□□ 0.59
AP3S2-202ENST00000423566 CFTRP13569 1480 aa18.72■□□□□ 0.59
AP3S2-202ENST00000423566 CC2D2AQ9P2K1 1620 aa18.68■□□□□ 0.58
AP3S2-202ENST00000423566 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
AP3S2-202ENST00000423566 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
AP3S2-202ENST00000423566 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
AP3S2-202ENST00000423566 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
AP3S2-202ENST00000423566 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
AP3S2-202ENST00000423566 SOGA1O94964 1423 aa18.53■□□□□ 0.56
AP3S2-202ENST00000423566 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.56
AP3S2-202ENST00000423566 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
AP3S2-202ENST00000423566 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
AP3S2-202ENST00000423566 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
AP3S2-202ENST00000423566 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
AP3S2-202ENST00000423566 CUX1P39880 1505 aa18.42■□□□□ 0.54
AP3S2-202ENST00000423566 KIF21BO75037 1637 aa18.4■□□□□ 0.54
AP3S2-202ENST00000423566 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
AP3S2-202ENST00000423566 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
AP3S2-202ENST00000423566 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
AP3S2-202ENST00000423566 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
AP3S2-202ENST00000423566 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
AP3S2-202ENST00000423566 CEP162Q5TB80 1403 aa18.29■□□□□ 0.52
AP3S2-202ENST00000423566 ERICH3Q5RHP9 1530 aa18.28■□□□□ 0.52
AP3S2-202ENST00000423566 UBTFP17480 764 aaKnown RBP18.28■□□□□ 0.52
AP3S2-202ENST00000423566 PDS5BQ9NTI5 1447 aa18.27■□□□□ 0.52
AP3S2-202ENST00000423566 PRXQ9BXM0 1461 aa18.26■□□□□ 0.51
AP3S2-202ENST00000423566 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
AP3S2-202ENST00000423566 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
AP3S2-202ENST00000423566 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
AP3S2-202ENST00000423566 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
AP3S2-202ENST00000423566 RAPGEF2Q9Y4G8 1499 aa18.17■□□□□ 0.5
AP3S2-202ENST00000423566 TOPBP1Q92547 1522 aa18.15■□□□□ 0.5
AP3S2-202ENST00000423566 CUX2O14529 1486 aa18.14■□□□□ 0.49
AP3S2-202ENST00000423566 NESP48681 1621 aa18.13■□□□□ 0.49
AP3S2-202ENST00000423566 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
AP3S2-202ENST00000423566 IGF1RP08069 1367 aa18.12■□□□□ 0.49
AP3S2-202ENST00000423566 CLIP1P30622 1438 aa18.12■□□□□ 0.49
AP3S2-202ENST00000423566 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
AP3S2-202ENST00000423566 URB2Q14146 1524 aaKnown RBP18.04■□□□□ 0.48
AP3S2-202ENST00000423566 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
AP3S2-202ENST00000423566 HRCP23327 699 aa18.03■□□□□ 0.48
AP3S2-202ENST00000423566 VPS8Q8N3P4 1428 aa18.03■□□□□ 0.48
AP3S2-202ENST00000423566 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
AP3S2-202ENST00000423566 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
AP3S2-202ENST00000423566 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
AP3S2-202ENST00000423566 CUL7Q14999 1698 aa17.93■□□□□ 0.46
AP3S2-202ENST00000423566 APLP2Q06481 763 aa17.9■□□□□ 0.46
AP3S2-202ENST00000423566 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
AP3S2-202ENST00000423566 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
AP3S2-202ENST00000423566 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.45
AP3S2-202ENST00000423566 GAPVD1Q14C86 1478 aa17.87■□□□□ 0.45
AP3S2-202ENST00000423566 ABCA5Q8WWZ7 1642 aa17.87■□□□□ 0.45
AP3S2-202ENST00000423566 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
AP3S2-202ENST00000423566 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.45
AP3S2-202ENST00000423566 WDR62O43379 1518 aa17.83■□□□□ 0.45
AP3S2-202ENST00000423566 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
AP3S2-202ENST00000423566 ARHGAP35Q9NRY4 1499 aa17.82■□□□□ 0.44
AP3S2-202ENST00000423566 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
AP3S2-202ENST00000423566 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
AP3S2-202ENST00000423566 MAP3K1Q13233 1512 aa17.78■□□□□ 0.44
AP3S2-202ENST00000423566 FHAD1B1AJZ9 1412 aa17.77■□□□□ 0.44
AP3S2-202ENST00000423566 GRIN2BQ13224 1484 aa17.73■□□□□ 0.43
AP3S2-202ENST00000423566 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
AP3S2-202ENST00000423566 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms