RNA–Protein interactions for RNA: ENST00000423473.6

CCDC144NL-AS1-202, CCDC144NL antisense RNA 1, humanhuman

TSL 5 BASIC

Gene CCDC144NL-AS1, Length 839 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-202ENST00000423473 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
CCDC144NL-AS1-202ENST00000423473 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
CCDC144NL-AS1-202ENST00000423473 ABCC9O60706 1549 aa20.63■□□□□ 0.89
CCDC144NL-AS1-202ENST00000423473 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
CCDC144NL-AS1-202ENST00000423473 NACADO15069 1562 aa19.48■□□□□ 0.71
CCDC144NL-AS1-202ENST00000423473 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
CCDC144NL-AS1-202ENST00000423473 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
CCDC144NL-AS1-202ENST00000423473 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
CCDC144NL-AS1-202ENST00000423473 MYO15BQ96JP2 1530 aa19.19■□□□□ 0.66
CCDC144NL-AS1-202ENST00000423473 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
CCDC144NL-AS1-202ENST00000423473 BICRAQ9NZM4 1560 aa19.11■□□□□ 0.65
CCDC144NL-AS1-202ENST00000423473 ZCCHC6Q5VYS8 1495 aaKnown RBP19.08■□□□□ 0.64
CCDC144NL-AS1-202ENST00000423473 DCAF1Q9Y4B6 1507 aa18.96■□□□□ 0.63
CCDC144NL-AS1-202ENST00000423473 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
CCDC144NL-AS1-202ENST00000423473 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
CCDC144NL-AS1-202ENST00000423473 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
CCDC144NL-AS1-202ENST00000423473 EIF4G1Q04637 1599 aaKnown RBP18.61■□□□□ 0.57
CCDC144NL-AS1-202ENST00000423473 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
CCDC144NL-AS1-202ENST00000423473 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
CCDC144NL-AS1-202ENST00000423473 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
CCDC144NL-AS1-202ENST00000423473 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
CCDC144NL-AS1-202ENST00000423473 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
CCDC144NL-AS1-202ENST00000423473 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
CCDC144NL-AS1-202ENST00000423473 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
CCDC144NL-AS1-202ENST00000423473 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
CCDC144NL-AS1-202ENST00000423473 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
CCDC144NL-AS1-202ENST00000423473 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
CCDC144NL-AS1-202ENST00000423473 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
CCDC144NL-AS1-202ENST00000423473 NESP48681 1621 aa17.75■□□□□ 0.43
CCDC144NL-AS1-202ENST00000423473 CUX2O14529 1486 aa17.71■□□□□ 0.43
CCDC144NL-AS1-202ENST00000423473 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
CCDC144NL-AS1-202ENST00000423473 KIF21AQ7Z4S6 1674 aa17.59■□□□□ 0.41
CCDC144NL-AS1-202ENST00000423473 THOC2Q8NI27 1593 aaKnown RBP17.59■□□□□ 0.41
CCDC144NL-AS1-202ENST00000423473 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
CCDC144NL-AS1-202ENST00000423473 WIZO95785 1651 aa17.58■□□□□ 0.41
CCDC144NL-AS1-202ENST00000423473 PDS5BQ9NTI5 1447 aa17.42■□□□□ 0.38
CCDC144NL-AS1-202ENST00000423473 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
CCDC144NL-AS1-202ENST00000423473 RSF1Q96T23 1441 aaPredicted RBP17.35■□□□□ 0.37
CCDC144NL-AS1-202ENST00000423473 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
CCDC144NL-AS1-202ENST00000423473 WDR62O43379 1518 aa17.31■□□□□ 0.36
CCDC144NL-AS1-202ENST00000423473 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
CCDC144NL-AS1-202ENST00000423473 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
CCDC144NL-AS1-202ENST00000423473 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
CCDC144NL-AS1-202ENST00000423473 CFTRP13569 1480 aa17.23■□□□□ 0.35
CCDC144NL-AS1-202ENST00000423473 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
CCDC144NL-AS1-202ENST00000423473 URB2Q14146 1524 aaKnown RBP17.13■□□□□ 0.33
CCDC144NL-AS1-202ENST00000423473 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
CCDC144NL-AS1-202ENST00000423473 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
CCDC144NL-AS1-202ENST00000423473 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
CCDC144NL-AS1-202ENST00000423473 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
CCDC144NL-AS1-202ENST00000423473 IFT140Q96RY7 1462 aa16.89■□□□□ 0.29
CCDC144NL-AS1-202ENST00000423473 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.29
CCDC144NL-AS1-202ENST00000423473 EIF4G3O43432 1585 aaKnown RBP16.86■□□□□ 0.29
CCDC144NL-AS1-202ENST00000423473 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
CCDC144NL-AS1-202ENST00000423473 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
CCDC144NL-AS1-202ENST00000423473 TARBP1Q13395 1621 aaKnown RBP16.82■□□□□ 0.28
CCDC144NL-AS1-202ENST00000423473 CHD1O14646 1710 aa16.79■□□□□ 0.28
CCDC144NL-AS1-202ENST00000423473 RIMBP3CA6NJZ7 1639 aa16.78■□□□□ 0.28
CCDC144NL-AS1-202ENST00000423473 RIMBP3BA6NNM3 1639 aa16.78■□□□□ 0.28
CCDC144NL-AS1-202ENST00000423473 RIMBP3Q9UFD9 1639 aa16.78■□□□□ 0.28
CCDC144NL-AS1-202ENST00000423473 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
CCDC144NL-AS1-202ENST00000423473 AQRO60306 1485 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCDC144NL-AS1-202ENST00000423473 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
CCDC144NL-AS1-202ENST00000423473 ARHGEF11O15085 1522 aa16.68■□□□□ 0.26
CCDC144NL-AS1-202ENST00000423473 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
CCDC144NL-AS1-202ENST00000423473 CUX1P39880 1505 aa16.67■□□□□ 0.26
CCDC144NL-AS1-202ENST00000423473 SOGA1O94964 1423 aa16.64■□□□□ 0.25
CCDC144NL-AS1-202ENST00000423473 WDR97A6NE52 1622 aa16.63■□□□□ 0.25
CCDC144NL-AS1-202ENST00000423473 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
CCDC144NL-AS1-202ENST00000423473 SUPT5HO00267 1087 aaKnown RBP16.58■□□□□ 0.24
CCDC144NL-AS1-202ENST00000423473 FBLN2P98095 1184 aa16.58■□□□□ 0.24
CCDC144NL-AS1-202ENST00000423473 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
CCDC144NL-AS1-202ENST00000423473 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
CCDC144NL-AS1-202ENST00000423473 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
CCDC144NL-AS1-202ENST00000423473 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
CCDC144NL-AS1-202ENST00000423473 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
CCDC144NL-AS1-202ENST00000423473 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
CCDC144NL-AS1-202ENST00000423473 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
CCDC144NL-AS1-202ENST00000423473 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
CCDC144NL-AS1-202ENST00000423473 WRNQ14191 1432 aaPredicted RBP eCLIP16.36■□□□□ 0.21
CCDC144NL-AS1-202ENST00000423473 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
CCDC144NL-AS1-202ENST00000423473 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
CCDC144NL-AS1-202ENST00000423473 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
CCDC144NL-AS1-202ENST00000423473 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
CCDC144NL-AS1-202ENST00000423473 ERCC6L2Q5T890 1561 aa16.3■□□□□ 0.2
CCDC144NL-AS1-202ENST00000423473 NUP160Q12769 1436 aa16.26■□□□□ 0.19
CCDC144NL-AS1-202ENST00000423473 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
CCDC144NL-AS1-202ENST00000423473 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
CCDC144NL-AS1-202ENST00000423473 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
CCDC144NL-AS1-202ENST00000423473 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
CCDC144NL-AS1-202ENST00000423473 PRG4Q92954 1404 aaPredicted RBP16.08■□□□□ 0.16
CCDC144NL-AS1-202ENST00000423473 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.16
CCDC144NL-AS1-202ENST00000423473 CUL7Q14999 1698 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms