RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 NISCHQ9Y2I1 1504 aa21.14■□□□□ 0.98
LINC01399-201ENST00000423311 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
LINC01399-201ENST00000423311 ZCCHC6Q5VYS8 1495 aaKnown RBP17.73■□□□□ 0.43
LINC01399-201ENST00000423311 ABCC9O60706 1549 aa17.62■□□□□ 0.41
LINC01399-201ENST00000423311 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
LINC01399-201ENST00000423311 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
LINC01399-201ENST00000423311 NACADO15069 1562 aa17.37■□□□□ 0.37
LINC01399-201ENST00000423311 DCAF8L2P0C7V8 631 aa17.36■□□□□ 0.37
LINC01399-201ENST00000423311 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.35
LINC01399-201ENST00000423311 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
LINC01399-201ENST00000423311 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
LINC01399-201ENST00000423311 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
LINC01399-201ENST00000423311 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
LINC01399-201ENST00000423311 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC01399-201ENST00000423311 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
LINC01399-201ENST00000423311 CECR2Q9BXF3 1484 aa16.36■□□□□ 0.21
LINC01399-201ENST00000423311 SMARCA4P51532 1647 aa16.31■□□□□ 0.2
LINC01399-201ENST00000423311 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
LINC01399-201ENST00000423311 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
LINC01399-201ENST00000423311 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
LINC01399-201ENST00000423311 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
LINC01399-201ENST00000423311 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
LINC01399-201ENST00000423311 WIZO95785 1651 aa16.15■□□□□ 0.18
LINC01399-201ENST00000423311 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
LINC01399-201ENST00000423311 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
LINC01399-201ENST00000423311 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
LINC01399-201ENST00000423311 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
LINC01399-201ENST00000423311 NCAPD3P42695 1498 aa16■□□□□ 0.15
LINC01399-201ENST00000423311 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
LINC01399-201ENST00000423311 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
LINC01399-201ENST00000423311 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
LINC01399-201ENST00000423311 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
LINC01399-201ENST00000423311 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
LINC01399-201ENST00000423311 CFTRP13569 1480 aa15.58■□□□□ 0.08
LINC01399-201ENST00000423311 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
LINC01399-201ENST00000423311 LAMC3Q9Y6N6 1575 aa15.53■□□□□ 0.08
LINC01399-201ENST00000423311 CHIC1Q5VXU3 224 aa15.45■□□□□ 0.06
LINC01399-201ENST00000423311 NESP48681 1621 aa15.4■□□□□ 0.06
LINC01399-201ENST00000423311 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
LINC01399-201ENST00000423311 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
LINC01399-201ENST00000423311 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
LINC01399-201ENST00000423311 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
LINC01399-201ENST00000423311 TRIM41Q8WV44 630 aa15.31■□□□□ 0.04
LINC01399-201ENST00000423311 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
LINC01399-201ENST00000423311 KIF21AQ7Z4S6 1674 aa15.31■□□□□ 0.04
LINC01399-201ENST00000423311 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
LINC01399-201ENST00000423311 CEP164Q9UPV0 1460 aa15.3■□□□□ 0.04
LINC01399-201ENST00000423311 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
LINC01399-201ENST00000423311 CUX1P39880 1505 aa15.25■□□□□ 0.03
LINC01399-201ENST00000423311 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
LINC01399-201ENST00000423311 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
LINC01399-201ENST00000423311 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
LINC01399-201ENST00000423311 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
LINC01399-201ENST00000423311 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
LINC01399-201ENST00000423311 WDR62O43379 1518 aa15.12■□□□□ 0.01
LINC01399-201ENST00000423311 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
LINC01399-201ENST00000423311 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
LINC01399-201ENST00000423311 EEA1Q15075 1411 aa15.09■□□□□ 0.01
LINC01399-201ENST00000423311 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0
LINC01399-201ENST00000423311 WDR97A6NE52 1622 aa15.03■□□□□ -0
LINC01399-201ENST00000423311 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
LINC01399-201ENST00000423311 SOGA1O94964 1423 aa15.02■□□□□ -0
LINC01399-201ENST00000423311 TARBP1Q13395 1621 aaKnown RBP15□□□□□ -0.01
LINC01399-201ENST00000423311 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
LINC01399-201ENST00000423311 CUX2O14529 1486 aa14.98□□□□□ -0.01
LINC01399-201ENST00000423311 RAD54L2Q9Y4B4 1467 aa14.97□□□□□ -0.01
LINC01399-201ENST00000423311 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
LINC01399-201ENST00000423311 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
LINC01399-201ENST00000423311 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
LINC01399-201ENST00000423311 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
LINC01399-201ENST00000423311 FAM9AQ8IZU1 332 aaPredicted RBP14.92□□□□□ -0.02
LINC01399-201ENST00000423311 AEBP2Q6ZN18 517 aaPredicted RBP14.9□□□□□ -0.02
LINC01399-201ENST00000423311 KIF21BO75037 1637 aa14.89□□□□□ -0.03
LINC01399-201ENST00000423311 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
LINC01399-201ENST00000423311 GAPVD1Q14C86 1478 aa14.87□□□□□ -0.03
LINC01399-201ENST00000423311 CUL7Q14999 1698 aa14.86□□□□□ -0.03
LINC01399-201ENST00000423311 PBRM1Q86U86 1689 aa14.85□□□□□ -0.03
LINC01399-201ENST00000423311 IGF1RP08069 1367 aa14.85□□□□□ -0.03
LINC01399-201ENST00000423311 TDRD9Q8NDG6 1382 aaKnown RBP14.84□□□□□ -0.03
LINC01399-201ENST00000423311 PRXQ9BXM0 1461 aa14.83□□□□□ -0.03
LINC01399-201ENST00000423311 EIF4G3O43432 1585 aaKnown RBP14.83□□□□□ -0.04
LINC01399-201ENST00000423311 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
LINC01399-201ENST00000423311 ZNF608Q9ULD9 1512 aaPredicted RBP14.81□□□□□ -0.04
LINC01399-201ENST00000423311 AQRO60306 1485 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC01399-201ENST00000423311 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
LINC01399-201ENST00000423311 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
LINC01399-201ENST00000423311 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
LINC01399-201ENST00000423311 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
LINC01399-201ENST00000423311 ADAMTS12P58397 1594 aa14.73□□□□□ -0.05
LINC01399-201ENST00000423311 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
LINC01399-201ENST00000423311 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
LINC01399-201ENST00000423311 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
LINC01399-201ENST00000423311 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
LINC01399-201ENST00000423311 UBTFP17480 764 aaKnown RBP14.67□□□□□ -0.06
LINC01399-201ENST00000423311 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
LINC01399-201ENST00000423311 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
LINC01399-201ENST00000423311 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
LINC01399-201ENST00000423311 GRIN2AQ12879 1464 aa14.61□□□□□ -0.07
LINC01399-201ENST00000423311 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
LINC01399-201ENST00000423311 CHD1O14646 1710 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms