RNA–Protein interactions for RNA: ENST00000422832.1

HLA-DMA-204, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-204ENST00000422832 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
HLA-DMA-204ENST00000422832 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
HLA-DMA-204ENST00000422832 ABCC9O60706 1549 aa18.52■□□□□ 0.56
HLA-DMA-204ENST00000422832 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
HLA-DMA-204ENST00000422832 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
HLA-DMA-204ENST00000422832 NACADO15069 1562 aa17.54■□□□□ 0.4
HLA-DMA-204ENST00000422832 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
HLA-DMA-204ENST00000422832 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
HLA-DMA-204ENST00000422832 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
HLA-DMA-204ENST00000422832 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
HLA-DMA-204ENST00000422832 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
HLA-DMA-204ENST00000422832 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
HLA-DMA-204ENST00000422832 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
HLA-DMA-204ENST00000422832 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
HLA-DMA-204ENST00000422832 SHROOM4Q9ULL8 1493 aa16.87■□□□□ 0.29
HLA-DMA-204ENST00000422832 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
HLA-DMA-204ENST00000422832 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
HLA-DMA-204ENST00000422832 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
HLA-DMA-204ENST00000422832 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
HLA-DMA-204ENST00000422832 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
HLA-DMA-204ENST00000422832 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
HLA-DMA-204ENST00000422832 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
HLA-DMA-204ENST00000422832 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
HLA-DMA-204ENST00000422832 HMGXB3Q12766 1538 aa16.06■□□□□ 0.16
HLA-DMA-204ENST00000422832 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
HLA-DMA-204ENST00000422832 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
HLA-DMA-204ENST00000422832 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
HLA-DMA-204ENST00000422832 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.14
HLA-DMA-204ENST00000422832 NESP48681 1621 aa15.9■□□□□ 0.14
HLA-DMA-204ENST00000422832 CUX2O14529 1486 aa15.9■□□□□ 0.14
HLA-DMA-204ENST00000422832 LAMC3Q9Y6N6 1575 aa15.82■□□□□ 0.12
HLA-DMA-204ENST00000422832 DNAJC5Q9H3Z4 198 aa15.81■□□□□ 0.12
HLA-DMA-204ENST00000422832 WIZO95785 1651 aa15.8■□□□□ 0.12
HLA-DMA-204ENST00000422832 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
HLA-DMA-204ENST00000422832 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
HLA-DMA-204ENST00000422832 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
HLA-DMA-204ENST00000422832 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
HLA-DMA-204ENST00000422832 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMA-204ENST00000422832 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
HLA-DMA-204ENST00000422832 MRC2Q9UBG0 1479 aa15.59■□□□□ 0.09
HLA-DMA-204ENST00000422832 CEP164Q9UPV0 1460 aa15.57■□□□□ 0.08
HLA-DMA-204ENST00000422832 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
HLA-DMA-204ENST00000422832 CFTRP13569 1480 aa15.52■□□□□ 0.08
HLA-DMA-204ENST00000422832 WDR62O43379 1518 aa15.51■□□□□ 0.07
HLA-DMA-204ENST00000422832 CCDC88BA6NC98 1476 aa15.43■□□□□ 0.06
HLA-DMA-204ENST00000422832 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
HLA-DMA-204ENST00000422832 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
HLA-DMA-204ENST00000422832 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
HLA-DMA-204ENST00000422832 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
HLA-DMA-204ENST00000422832 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
HLA-DMA-204ENST00000422832 IFT140Q96RY7 1462 aa15.24■□□□□ 0.03
HLA-DMA-204ENST00000422832 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
HLA-DMA-204ENST00000422832 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
HLA-DMA-204ENST00000422832 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
HLA-DMA-204ENST00000422832 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
HLA-DMA-204ENST00000422832 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
HLA-DMA-204ENST00000422832 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.01
HLA-DMA-204ENST00000422832 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0.01
HLA-DMA-204ENST00000422832 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
HLA-DMA-204ENST00000422832 FBLN2P98095 1184 aa15.07■□□□□ 0
HLA-DMA-204ENST00000422832 SOGA1O94964 1423 aa15.07■□□□□ 0
HLA-DMA-204ENST00000422832 RAD54L2Q9Y4B4 1467 aa15.04■□□□□ -0
HLA-DMA-204ENST00000422832 FGD5Q6ZNL6 1462 aa15.02■□□□□ -0
HLA-DMA-204ENST00000422832 TDRD9Q8NDG6 1382 aaKnown RBP15.02■□□□□ -0
HLA-DMA-204ENST00000422832 CUX1P39880 1505 aa15.01□□□□□ -0.01
HLA-DMA-204ENST00000422832 CHD1O14646 1710 aa15□□□□□ -0.01
HLA-DMA-204ENST00000422832 RIMBP3CA6NJZ7 1639 aa14.98□□□□□ -0.01
HLA-DMA-204ENST00000422832 RIMBP3BA6NNM3 1639 aa14.98□□□□□ -0.01
HLA-DMA-204ENST00000422832 RIMBP3Q9UFD9 1639 aa14.98□□□□□ -0.01
HLA-DMA-204ENST00000422832 WDR97A6NE52 1622 aa14.95□□□□□ -0.02
HLA-DMA-204ENST00000422832 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
HLA-DMA-204ENST00000422832 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
HLA-DMA-204ENST00000422832 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
HLA-DMA-204ENST00000422832 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
HLA-DMA-204ENST00000422832 CYB5RLQ6IPT4 315 aa14.9□□□□□ -0.02
HLA-DMA-204ENST00000422832 MAGI1Q96QZ7 1491 aaPredicted RBP14.89□□□□□ -0.03
HLA-DMA-204ENST00000422832 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
HLA-DMA-204ENST00000422832 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
HLA-DMA-204ENST00000422832 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
HLA-DMA-204ENST00000422832 SYNJ2O15056 1496 aa14.84□□□□□ -0.03
HLA-DMA-204ENST00000422832 ABCA10Q8WWZ4 1543 aa14.84□□□□□ -0.03
HLA-DMA-204ENST00000422832 SYNJ1O43426 1573 aa14.84□□□□□ -0.03
HLA-DMA-204ENST00000422832 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
HLA-DMA-204ENST00000422832 ABCA5Q8WWZ7 1642 aa14.8□□□□□ -0.04
HLA-DMA-204ENST00000422832 BIVM-ERCC5R4GMW8 1640 aa14.78□□□□□ -0.04
HLA-DMA-204ENST00000422832 CLASP1Q7Z460 1538 aa14.78□□□□□ -0.04
HLA-DMA-204ENST00000422832 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
HLA-DMA-204ENST00000422832 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
HLA-DMA-204ENST00000422832 GRIN2AQ12879 1464 aa14.7□□□□□ -0.06
HLA-DMA-204ENST00000422832 ADAMTS12P58397 1594 aa14.68□□□□□ -0.06
HLA-DMA-204ENST00000422832 FHAD1B1AJZ9 1412 aa14.68□□□□□ -0.06
HLA-DMA-204ENST00000422832 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
HLA-DMA-204ENST00000422832 NUP160Q12769 1436 aa14.62□□□□□ -0.07
HLA-DMA-204ENST00000422832 CEP170Q5SW79 1584 aa14.62□□□□□ -0.07
HLA-DMA-204ENST00000422832 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
HLA-DMA-204ENST00000422832 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
HLA-DMA-204ENST00000422832 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
HLA-DMA-204ENST00000422832 SHROOM2Q13796 1616 aa14.54□□□□□ -0.08
HLA-DMA-204ENST00000422832 PRG4Q92954 1404 aaPredicted RBP14.53□□□□□ -0.08
HLA-DMA-204ENST00000422832 IGF1RP08069 1367 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms