RNA–Protein interactions for RNA: ENST00000422459.1

SMIM25-202, Transcript of small integral membrane protein 25, humanhuman

TSL 2

Gene SMIM25, Length 1,058 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM25-202ENST00000422459 NISCHQ9Y2I1 1504 aa20.57■□□□□ 0.88
SMIM25-202ENST00000422459 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
SMIM25-202ENST00000422459 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
SMIM25-202ENST00000422459 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
SMIM25-202ENST00000422459 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
SMIM25-202ENST00000422459 ABCC9O60706 1549 aa16.8■□□□□ 0.28
SMIM25-202ENST00000422459 NACADO15069 1562 aa16.7■□□□□ 0.26
SMIM25-202ENST00000422459 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
SMIM25-202ENST00000422459 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
SMIM25-202ENST00000422459 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
SMIM25-202ENST00000422459 SCRIBQ14160 1630 aa16.36■□□□□ 0.21
SMIM25-202ENST00000422459 UNC13AQ9UPW8 1703 aa16.15■□□□□ 0.18
SMIM25-202ENST00000422459 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
SMIM25-202ENST00000422459 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
SMIM25-202ENST00000422459 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
SMIM25-202ENST00000422459 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
SMIM25-202ENST00000422459 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
SMIM25-202ENST00000422459 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
SMIM25-202ENST00000422459 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMIM25-202ENST00000422459 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
SMIM25-202ENST00000422459 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
SMIM25-202ENST00000422459 WIZO95785 1651 aa15.67■□□□□ 0.1
SMIM25-202ENST00000422459 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
SMIM25-202ENST00000422459 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
SMIM25-202ENST00000422459 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
SMIM25-202ENST00000422459 SMARCA2P51531 1590 aa15.51■□□□□ 0.07
SMIM25-202ENST00000422459 NCAPD3P42695 1498 aa15.45■□□□□ 0.06
SMIM25-202ENST00000422459 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
SMIM25-202ENST00000422459 CCDC88BA6NC98 1476 aa15.4■□□□□ 0.06
SMIM25-202ENST00000422459 CHIC1Q5VXU3 224 aa15.39■□□□□ 0.05
SMIM25-202ENST00000422459 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
SMIM25-202ENST00000422459 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
SMIM25-202ENST00000422459 CFTRP13569 1480 aa15.08■□□□□ 0.01
SMIM25-202ENST00000422459 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
SMIM25-202ENST00000422459 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
SMIM25-202ENST00000422459 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
SMIM25-202ENST00000422459 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
SMIM25-202ENST00000422459 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
SMIM25-202ENST00000422459 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
SMIM25-202ENST00000422459 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
SMIM25-202ENST00000422459 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
SMIM25-202ENST00000422459 BIVM-ERCC5R4GMW8 1640 aa14.87□□□□□ -0.03
SMIM25-202ENST00000422459 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
SMIM25-202ENST00000422459 CUX1P39880 1505 aa14.83□□□□□ -0.04
SMIM25-202ENST00000422459 NESP48681 1621 aa14.8□□□□□ -0.04
SMIM25-202ENST00000422459 EEA1Q15075 1411 aa14.79□□□□□ -0.04
SMIM25-202ENST00000422459 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
SMIM25-202ENST00000422459 SOGA1O94964 1423 aa14.76□□□□□ -0.05
SMIM25-202ENST00000422459 RUSC2Q8N2Y8 1516 aa14.71□□□□□ -0.05
SMIM25-202ENST00000422459 LOC105371045A0A1W2PR82 267 aa14.71□□□□□ -0.05
SMIM25-202ENST00000422459 PDS5BQ9NTI5 1447 aa14.71□□□□□ -0.05
SMIM25-202ENST00000422459 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
SMIM25-202ENST00000422459 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
SMIM25-202ENST00000422459 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
SMIM25-202ENST00000422459 FAM9AQ8IZU1 332 aaPredicted RBP14.65□□□□□ -0.06
SMIM25-202ENST00000422459 CSRNP3Q8WYN3 585 aa14.64□□□□□ -0.07
SMIM25-202ENST00000422459 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
SMIM25-202ENST00000422459 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
SMIM25-202ENST00000422459 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
SMIM25-202ENST00000422459 KIF21BO75037 1637 aa14.6□□□□□ -0.07
SMIM25-202ENST00000422459 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
SMIM25-202ENST00000422459 KIF27Q86VH2 1401 aa14.58□□□□□ -0.08
SMIM25-202ENST00000422459 PRXQ9BXM0 1461 aa14.57□□□□□ -0.08
SMIM25-202ENST00000422459 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
SMIM25-202ENST00000422459 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
SMIM25-202ENST00000422459 MRC2Q9UBG0 1479 aa14.53□□□□□ -0.08
SMIM25-202ENST00000422459 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
SMIM25-202ENST00000422459 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
SMIM25-202ENST00000422459 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
SMIM25-202ENST00000422459 WDR62O43379 1518 aa14.51□□□□□ -0.09
SMIM25-202ENST00000422459 CUX2O14529 1486 aa14.5□□□□□ -0.09
SMIM25-202ENST00000422459 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
SMIM25-202ENST00000422459 IGF1RP08069 1367 aa14.49□□□□□ -0.09
SMIM25-202ENST00000422459 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
SMIM25-202ENST00000422459 TARBP1Q13395 1621 aaKnown RBP14.47□□□□□ -0.09
SMIM25-202ENST00000422459 THOC2Q8NI27 1593 aaKnown RBP14.44□□□□□ -0.1
SMIM25-202ENST00000422459 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
SMIM25-202ENST00000422459 CEP162Q5TB80 1403 aa14.41□□□□□ -0.1
SMIM25-202ENST00000422459 IFT140Q96RY7 1462 aa14.37□□□□□ -0.11
SMIM25-202ENST00000422459 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
SMIM25-202ENST00000422459 ERCC6Q03468 1493 aa14.36□□□□□ -0.11
SMIM25-202ENST00000422459 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
SMIM25-202ENST00000422459 CUL7Q14999 1698 aa14.34□□□□□ -0.11
SMIM25-202ENST00000422459 UBTFP17480 764 aaKnown RBP14.33□□□□□ -0.12
SMIM25-202ENST00000422459 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
SMIM25-202ENST00000422459 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.12
SMIM25-202ENST00000422459 CLIP1P30622 1438 aa14.28□□□□□ -0.12
SMIM25-202ENST00000422459 ZNF608Q9ULD9 1512 aaPredicted RBP14.26□□□□□ -0.13
SMIM25-202ENST00000422459 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
SMIM25-202ENST00000422459 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMIM25-202ENST00000422459 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
SMIM25-202ENST00000422459 ADAMTS12P58397 1594 aa14.22□□□□□ -0.13
SMIM25-202ENST00000422459 FHAD1B1AJZ9 1412 aa14.22□□□□□ -0.13
SMIM25-202ENST00000422459 EIF4G3O43432 1585 aaKnown RBP14.21□□□□□ -0.14
SMIM25-202ENST00000422459 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
SMIM25-202ENST00000422459 VPS8Q8N3P4 1428 aa14.2□□□□□ -0.14
SMIM25-202ENST00000422459 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
SMIM25-202ENST00000422459 MAGI1Q96QZ7 1491 aaPredicted RBP14.15□□□□□ -0.14
SMIM25-202ENST00000422459 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
SMIM25-202ENST00000422459 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms