RNA–Protein interactions for RNA: ENST00000422324.1

PPP1R9A-204, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 2

Gene PPP1R9A, Length 512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-204ENST00000422324 NISCHQ9Y2I1 1504 aa66.22■■■■■ 8.19
PPP1R9A-204ENST00000422324 CCDC180Q9P1Z9 1646 aa59.07■■■■■ 7.05
PPP1R9A-204ENST00000422324 ABCC9O60706 1549 aa58.06■■■■■ 6.88
PPP1R9A-204ENST00000422324 RB1CC1Q8TDY2 1594 aa55.74■■■■■ 6.51
PPP1R9A-204ENST00000422324 NACADO15069 1562 aa55.59■■■■■ 6.49
PPP1R9A-204ENST00000422324 DCAF8L2P0C7V8 631 aa55.32■■■■■ 6.45
PPP1R9A-204ENST00000422324 MYO15BQ96JP2 1530 aa55.18■■■■■ 6.42
PPP1R9A-204ENST00000422324 ZCCHC6Q5VYS8 1495 aaKnown RBP55.12■■■■■ 6.41
PPP1R9A-204ENST00000422324 DCAF1Q9Y4B6 1507 aa54.81■■■■■ 6.37
PPP1R9A-204ENST00000422324 UNC13AQ9UPW8 1703 aa54.47■■■■■ 6.31
PPP1R9A-204ENST00000422324 PABPN1Q86U42 306 aaKnown RBP eCLIP54.15■■■■■ 6.26
PPP1R9A-204ENST00000422324 BICRAQ9NZM4 1560 aa54.08■■■■■ 6.25
PPP1R9A-204ENST00000422324 SCRIBQ14160 1630 aa53.83■■■■■ 6.21
PPP1R9A-204ENST00000422324 DNAJC5BQ9UF47 199 aa53.58■■■■■ 6.17
PPP1R9A-204ENST00000422324 SHROOM4Q9ULL8 1493 aa53.51■■■■■ 6.16
PPP1R9A-204ENST00000422324 EIF4G1Q04637 1599 aaKnown RBP52.68■■■■■ 6.02
PPP1R9A-204ENST00000422324 CC2D2AQ9P2K1 1620 aa52.53■■■■■ 6
PPP1R9A-204ENST00000422324 CECR2Q9BXF3 1484 aa52.22■■■■■ 5.95
PPP1R9A-204ENST00000422324 SMARCA4P51532 1647 aa51.47■■■■■ 5.83
PPP1R9A-204ENST00000422324 BAZ1AQ9NRL2 1556 aaPredicted RBP51.36■■■■■ 5.81
PPP1R9A-204ENST00000422324 NCAPD3P42695 1498 aa51.29■■■■■ 5.8
PPP1R9A-204ENST00000422324 ATAD2BQ9ULI0 1458 aa51.27■■■■■ 5.8
PPP1R9A-204ENST00000422324 SMARCA2P51531 1590 aa51.19■■■■■ 5.79
PPP1R9A-204ENST00000422324 HMGXB3Q12766 1538 aa51.03■■■■■ 5.76
PPP1R9A-204ENST00000422324 MROH2BQ7Z745 1585 aa51.03■■■■■ 5.76
PPP1R9A-204ENST00000422324 PEG3Q9GZU2 1588 aa51.01■■■■■ 5.76
PPP1R9A-204ENST00000422324 BAZ1BQ9UIG0 1483 aaKnown RBP50.82■■■■■ 5.73
PPP1R9A-204ENST00000422324 WIZO95785 1651 aa50.46■■■■■ 5.67
PPP1R9A-204ENST00000422324 RSF1Q96T23 1441 aaPredicted RBP50.31■■■■■ 5.64
PPP1R9A-204ENST00000422324 NESP48681 1621 aa50.15■■■■■ 5.62
PPP1R9A-204ENST00000422324 ERCC6Q03468 1493 aa50.06■■■■■ 5.6
PPP1R9A-204ENST00000422324 LAMC3Q9Y6N6 1575 aa50■■■■■ 5.6
PPP1R9A-204ENST00000422324 TOP2AP11388 1531 aaKnown RBP49.93■■■■■ 5.58
PPP1R9A-204ENST00000422324 CADPSQ9ULU8 1353 aa49.76■■■■■ 5.56
PPP1R9A-204ENST00000422324 CUX2O14529 1486 aa49.69■■■■■ 5.55
PPP1R9A-204ENST00000422324 PDS5BQ9NTI5 1447 aa49.65■■■■■ 5.54
PPP1R9A-204ENST00000422324 KIF21AQ7Z4S6 1674 aa49.57■■■■■ 5.53
PPP1R9A-204ENST00000422324 THOC2Q8NI27 1593 aaKnown RBP49.53■■■■■ 5.52
PPP1R9A-204ENST00000422324 CFTRP13569 1480 aa49.42■■■■■ 5.5
PPP1R9A-204ENST00000422324 CCDC88BA6NC98 1476 aa49.31■■■■■ 5.48
PPP1R9A-204ENST00000422324 FANCD2Q9BXW9 1451 aa49.2■■■■■ 5.47
PPP1R9A-204ENST00000422324 MRC2Q9UBG0 1479 aa49.18■■■■■ 5.46
PPP1R9A-204ENST00000422324 CEP164Q9UPV0 1460 aa49.18■■■■■ 5.46
PPP1R9A-204ENST00000422324 WDR62O43379 1518 aa49.06■■■■■ 5.44
PPP1R9A-204ENST00000422324 PRDM2Q13029 1718 aa49.03■■■■■ 5.44
PPP1R9A-204ENST00000422324 URB2Q14146 1524 aaKnown RBP48.75■■■■■ 5.39
PPP1R9A-204ENST00000422324 SUPT5HO00267 1087 aaKnown RBP48.68■■■■■ 5.38
PPP1R9A-204ENST00000422324 DNAJC5Q9H3Z4 198 aa48.52■■■■■ 5.36
PPP1R9A-204ENST00000422324 TOPBP1Q92547 1522 aa48.38■■■■■ 5.34
PPP1R9A-204ENST00000422324 ABCC8Q09428 1581 aa48.34■■■■■ 5.33
PPP1R9A-204ENST00000422324 DNMBPQ6XZF7 1577 aa48.31■■■■■ 5.32
PPP1R9A-204ENST00000422324 IFT140Q96RY7 1462 aa48.16■■■■■ 5.3
PPP1R9A-204ENST00000422324 ZNF608Q9ULD9 1512 aaPredicted RBP47.97■■■■■ 5.27
PPP1R9A-204ENST00000422324 POLA1P09884 1462 aaPredicted RBP47.95■■■■■ 5.27
PPP1R9A-204ENST00000422324 CUX1P39880 1505 aa47.91■■■■■ 5.26
PPP1R9A-204ENST00000422324 TARBP1Q13395 1621 aaKnown RBP47.9■■■■■ 5.26
PPP1R9A-204ENST00000422324 EIF4G3O43432 1585 aaKnown RBP47.8■■■■■ 5.24
PPP1R9A-204ENST00000422324 FGD5Q6ZNL6 1462 aa47.78■■■■■ 5.24
PPP1R9A-204ENST00000422324 RAD54L2Q9Y4B4 1467 aa47.72■■■■■ 5.23
PPP1R9A-204ENST00000422324 SOGA1O94964 1423 aa47.71■■■■■ 5.23
PPP1R9A-204ENST00000422324 AQRO60306 1485 aaKnown RBP eCLIP47.63■■■■■ 5.22
PPP1R9A-204ENST00000422324 WDR97A6NE52 1622 aa47.52■■■■■ 5.2
PPP1R9A-204ENST00000422324 OSCARQ8IYS5 282 aa47.5■■■■■ 5.19
PPP1R9A-204ENST00000422324 TDRD9Q8NDG6 1382 aaKnown RBP47.48■■■■■ 5.19
PPP1R9A-204ENST00000422324 WRNQ14191 1432 aaPredicted RBP eCLIP47.45■■■■■ 5.19
PPP1R9A-204ENST00000422324 BIVM-ERCC5R4GMW8 1640 aa47.41■■■■■ 5.18
PPP1R9A-204ENST00000422324 TOP2BQ02880 1626 aa47.4■■■■■ 5.18
PPP1R9A-204ENST00000422324 SYNJ1O43426 1573 aa47.37■■■■■ 5.17
PPP1R9A-204ENST00000422324 ABCA10Q8WWZ4 1543 aa47.31■■■■■ 5.16
PPP1R9A-204ENST00000422324 CHD1O14646 1710 aa47.24■■■■■ 5.15
PPP1R9A-204ENST00000422324 GRIN2BQ13224 1484 aa47.22■■■■■ 5.15
PPP1R9A-204ENST00000422324 SNAPC4Q5SXM2 1469 aa47.21■■■■■ 5.15
PPP1R9A-204ENST00000422324 ABCA5Q8WWZ7 1642 aa47.18■■■■■ 5.14
PPP1R9A-204ENST00000422324 GAPVD1Q14C86 1478 aa47.17■■■■■ 5.14
PPP1R9A-204ENST00000422324 MAGI1Q96QZ7 1491 aaPredicted RBP47.14■■■■■ 5.14
PPP1R9A-204ENST00000422324 PBRM1Q86U86 1689 aa47.13■■■■■ 5.14
PPP1R9A-204ENST00000422324 FBLN2P98095 1184 aa47.06■■■■■ 5.12
PPP1R9A-204ENST00000422324 SYNJ2O15056 1496 aa46.96■■■■■ 5.11
PPP1R9A-204ENST00000422324 CHMP7Q8WUX9 453 aaPredicted RBP46.9■■■■■ 5.1
PPP1R9A-204ENST00000422324 RIMBP3CA6NJZ7 1639 aa46.86■■■■■ 5.09
PPP1R9A-204ENST00000422324 RIMBP3BA6NNM3 1639 aa46.86■■■■■ 5.09
PPP1R9A-204ENST00000422324 RIMBP3Q9UFD9 1639 aa46.86■■■■■ 5.09
PPP1R9A-204ENST00000422324 ARHGEF11O15085 1522 aa46.81■■■■■ 5.08
PPP1R9A-204ENST00000422324 ADAMTS12P58397 1594 aa46.76■■■■■ 5.08
PPP1R9A-204ENST00000422324 CLASP1Q7Z460 1538 aa46.75■■■■■ 5.07
PPP1R9A-204ENST00000422324 ERICH3Q5RHP9 1530 aa46.74■■■■■ 5.07
PPP1R9A-204ENST00000422324 TRIM41Q8WV44 630 aa46.74■■■■■ 5.07
PPP1R9A-204ENST00000422324 GRIN2AQ12879 1464 aa46.63■■■■■ 5.05
PPP1R9A-204ENST00000422324 FHAD1B1AJZ9 1412 aa46.62■■■■■ 5.05
PPP1R9A-204ENST00000422324 KIF27Q86VH2 1401 aa46.47■■■■■ 5.03
PPP1R9A-204ENST00000422324 NUP160Q12769 1436 aa46.45■■■■■ 5.03
PPP1R9A-204ENST00000422324 CEP170Q5SW79 1584 aa46.43■■■■■ 5.02
PPP1R9A-204ENST00000422324 ARAP1Q96P48 1450 aa46.42■■■■■ 5.02
PPP1R9A-204ENST00000422324 IGF1RP08069 1367 aa46.32■■■■■ 5.01
PPP1R9A-204ENST00000422324 CYB5RLQ6IPT4 315 aa46.3■■■■■ 5
PPP1R9A-204ENST00000422324 CUL7Q14999 1698 aa46.27■■■■■ 5
PPP1R9A-204ENST00000422324 SHROOM2Q13796 1616 aa46.15■■■■■ 4.98
PPP1R9A-204ENST00000422324 RUSC2Q8N2Y8 1516 aa46.08■■■■■ 4.97
PPP1R9A-204ENST00000422324 ERCC6L2Q5T890 1561 aa46.06■■■■■ 4.96
PPP1R9A-204ENST00000422324 CARMIL1Q5VZK9 1371 aa46.02■■■■■ 4.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms