RNA–Protein interactions for RNA: ENST00000422304.1

POLR2J4-201, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 2

Gene POLR2J4, Length 974 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-201ENST00000422304 NISCHQ9Y2I1 1504 aa23.17■■□□□ 1.3
POLR2J4-201ENST00000422304 ABCC9O60706 1549 aa21.04■□□□□ 0.96
POLR2J4-201ENST00000422304 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
POLR2J4-201ENST00000422304 RB1CC1Q8TDY2 1594 aa19.91■□□□□ 0.78
POLR2J4-201ENST00000422304 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
POLR2J4-201ENST00000422304 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
POLR2J4-201ENST00000422304 NACADO15069 1562 aa19.71■□□□□ 0.75
POLR2J4-201ENST00000422304 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
POLR2J4-201ENST00000422304 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
POLR2J4-201ENST00000422304 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
POLR2J4-201ENST00000422304 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
POLR2J4-201ENST00000422304 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
POLR2J4-201ENST00000422304 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
POLR2J4-201ENST00000422304 DCAF1Q9Y4B6 1507 aa19.09■□□□□ 0.65
POLR2J4-201ENST00000422304 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
POLR2J4-201ENST00000422304 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
POLR2J4-201ENST00000422304 EIF4G1Q04637 1599 aaKnown RBP18.96■□□□□ 0.63
POLR2J4-201ENST00000422304 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
POLR2J4-201ENST00000422304 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
POLR2J4-201ENST00000422304 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
POLR2J4-201ENST00000422304 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
POLR2J4-201ENST00000422304 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.5
POLR2J4-201ENST00000422304 CUX2O14529 1486 aa18.12■□□□□ 0.49
POLR2J4-201ENST00000422304 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
POLR2J4-201ENST00000422304 NESP48681 1621 aa18.11■□□□□ 0.49
POLR2J4-201ENST00000422304 ERCC6Q03468 1493 aa18.07■□□□□ 0.48
POLR2J4-201ENST00000422304 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
POLR2J4-201ENST00000422304 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
POLR2J4-201ENST00000422304 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
POLR2J4-201ENST00000422304 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
POLR2J4-201ENST00000422304 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
POLR2J4-201ENST00000422304 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
POLR2J4-201ENST00000422304 MROH2BQ7Z745 1585 aa17.92■□□□□ 0.46
POLR2J4-201ENST00000422304 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
POLR2J4-201ENST00000422304 WIZO95785 1651 aa17.77■□□□□ 0.44
POLR2J4-201ENST00000422304 WDR62O43379 1518 aa17.63■□□□□ 0.41
POLR2J4-201ENST00000422304 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
POLR2J4-201ENST00000422304 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
POLR2J4-201ENST00000422304 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
POLR2J4-201ENST00000422304 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
POLR2J4-201ENST00000422304 CEP164Q9UPV0 1460 aa17.48■□□□□ 0.39
POLR2J4-201ENST00000422304 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
POLR2J4-201ENST00000422304 TOP2AP11388 1531 aaKnown RBP17.44■□□□□ 0.38
POLR2J4-201ENST00000422304 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
POLR2J4-201ENST00000422304 CFTRP13569 1480 aa17.4■□□□□ 0.38
POLR2J4-201ENST00000422304 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
POLR2J4-201ENST00000422304 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
POLR2J4-201ENST00000422304 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
POLR2J4-201ENST00000422304 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
POLR2J4-201ENST00000422304 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
POLR2J4-201ENST00000422304 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
POLR2J4-201ENST00000422304 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
POLR2J4-201ENST00000422304 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
POLR2J4-201ENST00000422304 CHD1O14646 1710 aa17.18■□□□□ 0.34
POLR2J4-201ENST00000422304 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
POLR2J4-201ENST00000422304 TARBP1Q13395 1621 aaKnown RBP17.1■□□□□ 0.33
POLR2J4-201ENST00000422304 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
POLR2J4-201ENST00000422304 DNMBPQ6XZF7 1577 aa17.09■□□□□ 0.33
POLR2J4-201ENST00000422304 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
POLR2J4-201ENST00000422304 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
POLR2J4-201ENST00000422304 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
POLR2J4-201ENST00000422304 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.312e-10■■■■■ 40.6
POLR2J4-201ENST00000422304 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
POLR2J4-201ENST00000422304 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
POLR2J4-201ENST00000422304 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
POLR2J4-201ENST00000422304 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
POLR2J4-201ENST00000422304 CUX1P39880 1505 aa16.86■□□□□ 0.29
POLR2J4-201ENST00000422304 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
POLR2J4-201ENST00000422304 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
POLR2J4-201ENST00000422304 FGD5Q6ZNL6 1462 aa16.84■□□□□ 0.29
POLR2J4-201ENST00000422304 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
POLR2J4-201ENST00000422304 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
POLR2J4-201ENST00000422304 CYB5RLQ6IPT4 315 aa16.77■□□□□ 0.28
POLR2J4-201ENST00000422304 SOGA1O94964 1423 aa16.75■□□□□ 0.27
POLR2J4-201ENST00000422304 ABCA5Q8WWZ7 1642 aa16.73■□□□□ 0.27
POLR2J4-201ENST00000422304 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
POLR2J4-201ENST00000422304 FBLN2P98095 1184 aa16.71■□□□□ 0.27
POLR2J4-201ENST00000422304 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
POLR2J4-201ENST00000422304 GRIN2BQ13224 1484 aa16.67■□□□□ 0.26
POLR2J4-201ENST00000422304 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
POLR2J4-201ENST00000422304 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
POLR2J4-201ENST00000422304 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
POLR2J4-201ENST00000422304 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
POLR2J4-201ENST00000422304 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
POLR2J4-201ENST00000422304 CEP170Q5SW79 1584 aa16.59■□□□□ 0.25
POLR2J4-201ENST00000422304 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
POLR2J4-201ENST00000422304 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
POLR2J4-201ENST00000422304 SHROOM2Q13796 1616 aa16.53■□□□□ 0.24
POLR2J4-201ENST00000422304 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
POLR2J4-201ENST00000422304 TOP2BQ02880 1626 aa16.52■□□□□ 0.23
POLR2J4-201ENST00000422304 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.23
POLR2J4-201ENST00000422304 GRIN2AQ12879 1464 aa16.51■□□□□ 0.23
POLR2J4-201ENST00000422304 NUP160Q12769 1436 aa16.45■□□□□ 0.22
POLR2J4-201ENST00000422304 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
POLR2J4-201ENST00000422304 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
POLR2J4-201ENST00000422304 ERICH3Q5RHP9 1530 aa16.37■□□□□ 0.21
POLR2J4-201ENST00000422304 SUPT5HO00267 1087 aaKnown RBP16.37■□□□□ 0.21
POLR2J4-201ENST00000422304 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
POLR2J4-201ENST00000422304 ADCY10Q96PN6 1610 aa16.28■□□□□ 0.2
POLR2J4-201ENST00000422304 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms