RNA–Protein interactions for RNA: ENST00000422274.2

TNR-203, Transcript of tenascin R, humanhuman

TSL 5

Gene TNR, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNR-203ENST00000422274 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
TNR-203ENST00000422274 ABCC9O60706 1549 aa33.15■■■□□ 2.9
TNR-203ENST00000422274 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
TNR-203ENST00000422274 RB1CC1Q8TDY2 1594 aa31.51■■■□□ 2.63
TNR-203ENST00000422274 NACADO15069 1562 aa31.28■■■□□ 2.6
TNR-203ENST00000422274 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
TNR-203ENST00000422274 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
TNR-203ENST00000422274 UNC13AQ9UPW8 1703 aa30.95■■■□□ 2.54
TNR-203ENST00000422274 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
TNR-203ENST00000422274 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
TNR-203ENST00000422274 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
TNR-203ENST00000422274 ZCCHC6Q5VYS8 1495 aaKnown RBP30.49■■■□□ 2.47
TNR-203ENST00000422274 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
TNR-203ENST00000422274 SHROOM4Q9ULL8 1493 aa30.18■■■□□ 2.42
TNR-203ENST00000422274 SCRIBQ14160 1630 aa30.12■■■□□ 2.41
TNR-203ENST00000422274 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
TNR-203ENST00000422274 EIF4G1Q04637 1599 aaKnown RBP29.89■■■□□ 2.38
TNR-203ENST00000422274 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
TNR-203ENST00000422274 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
TNR-203ENST00000422274 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
TNR-203ENST00000422274 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
TNR-203ENST00000422274 DNAJC5Q9H3Z4 198 aa28.72■■■□□ 2.19
TNR-203ENST00000422274 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
TNR-203ENST00000422274 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
TNR-203ENST00000422274 CUX2O14529 1486 aa28.61■■■□□ 2.17
TNR-203ENST00000422274 ERCC6Q03468 1493 aa28.56■■■□□ 2.16
TNR-203ENST00000422274 BAZ1AQ9NRL2 1556 aaPredicted RBP28.55■■■□□ 2.16
TNR-203ENST00000422274 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
TNR-203ENST00000422274 NESP48681 1621 aa28.49■■■□□ 2.15
TNR-203ENST00000422274 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
TNR-203ENST00000422274 MROH2BQ7Z745 1585 aa28.38■■■□□ 2.13
TNR-203ENST00000422274 THOC2Q8NI27 1593 aaKnown RBP28.26■■■□□ 2.11
TNR-203ENST00000422274 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
TNR-203ENST00000422274 KIF21AQ7Z4S6 1674 aa28.16■■■□□ 2.1
TNR-203ENST00000422274 WIZO95785 1651 aa28.05■■■□□ 2.08
TNR-203ENST00000422274 PDS5BQ9NTI5 1447 aa28.02■■■□□ 2.08
TNR-203ENST00000422274 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
TNR-203ENST00000422274 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
TNR-203ENST00000422274 WDR62O43379 1518 aa27.81■■■□□ 2.04
TNR-203ENST00000422274 RSF1Q96T23 1441 aaPredicted RBP27.73■■■□□ 2.03
TNR-203ENST00000422274 CEP164Q9UPV0 1460 aa27.68■■■□□ 2.02
TNR-203ENST00000422274 CFTRP13569 1480 aa27.66■■■□□ 2.02
TNR-203ENST00000422274 FANCD2Q9BXW9 1451 aa27.66■■■□□ 2.02
TNR-203ENST00000422274 TOP2AP11388 1531 aaKnown RBP27.65■■■□□ 2.02
TNR-203ENST00000422274 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
TNR-203ENST00000422274 PRDM2Q13029 1718 aa27.45■■□□□ 1.99
TNR-203ENST00000422274 CCDC88BA6NC98 1476 aa27.34■■□□□ 1.97
TNR-203ENST00000422274 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
TNR-203ENST00000422274 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
TNR-203ENST00000422274 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
TNR-203ENST00000422274 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
TNR-203ENST00000422274 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
TNR-203ENST00000422274 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
TNR-203ENST00000422274 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
TNR-203ENST00000422274 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.91
TNR-203ENST00000422274 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
TNR-203ENST00000422274 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
TNR-203ENST00000422274 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
TNR-203ENST00000422274 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
TNR-203ENST00000422274 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
TNR-203ENST00000422274 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.89
TNR-203ENST00000422274 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
TNR-203ENST00000422274 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
TNR-203ENST00000422274 CHD1O14646 1710 aa26.86■■□□□ 1.89
TNR-203ENST00000422274 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
TNR-203ENST00000422274 SOGA1O94964 1423 aa26.69■■□□□ 1.86
TNR-203ENST00000422274 CUX1P39880 1505 aa26.67■■□□□ 1.86
TNR-203ENST00000422274 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
TNR-203ENST00000422274 FGD5Q6ZNL6 1462 aa26.67■■□□□ 1.86
TNR-203ENST00000422274 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
TNR-203ENST00000422274 ARAP1Q96P48 1450 aa26.62■■□□□ 1.85
TNR-203ENST00000422274 FBLN2P98095 1184 aa26.61■■□□□ 1.85
TNR-203ENST00000422274 CYB5RLQ6IPT4 315 aa26.6■■□□□ 1.85
TNR-203ENST00000422274 SNAPC4Q5SXM2 1469 aa26.59■■□□□ 1.85
TNR-203ENST00000422274 CLASP1Q7Z460 1538 aa26.54■■□□□ 1.84
TNR-203ENST00000422274 MAGI1Q96QZ7 1491 aaPredicted RBP26.5■■□□□ 1.83
TNR-203ENST00000422274 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
TNR-203ENST00000422274 PBRM1Q86U86 1689 aa26.45■■□□□ 1.82
TNR-203ENST00000422274 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
TNR-203ENST00000422274 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
TNR-203ENST00000422274 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
TNR-203ENST00000422274 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.81
TNR-203ENST00000422274 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
TNR-203ENST00000422274 ABCA10Q8WWZ4 1543 aa26.37■■□□□ 1.81
TNR-203ENST00000422274 TRHP20396 242 aaPredicted RBP26.28■■□□□ 1.8
TNR-203ENST00000422274 BIVM-ERCC5R4GMW8 1640 aa26.23■■□□□ 1.79
TNR-203ENST00000422274 TOP2BQ02880 1626 aa26.2■■□□□ 1.78
TNR-203ENST00000422274 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
TNR-203ENST00000422274 ADAMTS12P58397 1594 aa26.17■■□□□ 1.78
TNR-203ENST00000422274 GRIN2AQ12879 1464 aa26.17■■□□□ 1.78
TNR-203ENST00000422274 ERCC6L2Q5T890 1561 aa26.14■■□□□ 1.78
TNR-203ENST00000422274 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
TNR-203ENST00000422274 NUP160Q12769 1436 aa26.11■■□□□ 1.77
TNR-203ENST00000422274 SHROOM2Q13796 1616 aa26.05■■□□□ 1.76
TNR-203ENST00000422274 FHAD1B1AJZ9 1412 aa26.03■■□□□ 1.76
TNR-203ENST00000422274 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
TNR-203ENST00000422274 PRG4Q92954 1404 aaPredicted RBP25.81■■□□□ 1.72
TNR-203ENST00000422274 RUSC2Q8N2Y8 1516 aa25.81■■□□□ 1.72
TNR-203ENST00000422274 KIF13AQ9H1H9 1805 aa25.79■■□□□ 1.72
TNR-203ENST00000422274 JPH4Q96JJ6 628 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms