RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
NF1-203ENST00000422121 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
NF1-203ENST00000422121 CHIC1Q5VXU3 224 aa23.11■■□□□ 1.29
NF1-203ENST00000422121 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
NF1-203ENST00000422121 ABCC9O60706 1549 aa21.26■□□□□ 0.99
NF1-203ENST00000422121 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
NF1-203ENST00000422121 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
NF1-203ENST00000422121 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
NF1-203ENST00000422121 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
NF1-203ENST00000422121 NACADO15069 1562 aa20.32■□□□□ 0.84
NF1-203ENST00000422121 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
NF1-203ENST00000422121 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
NF1-203ENST00000422121 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
NF1-203ENST00000422121 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
NF1-203ENST00000422121 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
NF1-203ENST00000422121 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
NF1-203ENST00000422121 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
NF1-203ENST00000422121 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
NF1-203ENST00000422121 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
NF1-203ENST00000422121 FOXD1Q16676 465 aa19.48■□□□□ 0.71
NF1-203ENST00000422121 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
NF1-203ENST00000422121 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
NF1-203ENST00000422121 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
NF1-203ENST00000422121 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
NF1-203ENST00000422121 NCAPD3P42695 1498 aa18.83■□□□□ 0.6
NF1-203ENST00000422121 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
NF1-203ENST00000422121 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
NF1-203ENST00000422121 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
NF1-203ENST00000422121 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
NF1-203ENST00000422121 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
NF1-203ENST00000422121 PEG3Q9GZU2 1588 aa18.7■□□□□ 0.58
NF1-203ENST00000422121 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
NF1-203ENST00000422121 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
NF1-203ENST00000422121 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
NF1-203ENST00000422121 WIZO95785 1651 aa18.54■□□□□ 0.56
NF1-203ENST00000422121 NESP48681 1621 aa18.41■□□□□ 0.54
NF1-203ENST00000422121 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
NF1-203ENST00000422121 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
NF1-203ENST00000422121 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
NF1-203ENST00000422121 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
NF1-203ENST00000422121 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
NF1-203ENST00000422121 CCDC88BA6NC98 1476 aa18.15■□□□□ 0.5
NF1-203ENST00000422121 ADRA2BP18089 450 aa18.15■□□□□ 0.5
NF1-203ENST00000422121 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
NF1-203ENST00000422121 PIAS4Q8N2W9 510 aaPredicted RBP18.14■□□□□ 0.49
NF1-203ENST00000422121 CFTRP13569 1480 aa18.14■□□□□ 0.49
NF1-203ENST00000422121 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
NF1-203ENST00000422121 MSH5O43196 834 aa18.11■□□□□ 0.49
NF1-203ENST00000422121 CUX2O14529 1486 aa18.1■□□□□ 0.49
NF1-203ENST00000422121 THOC2Q8NI27 1593 aaKnown RBP18.09■□□□□ 0.49
NF1-203ENST00000422121 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
NF1-203ENST00000422121 SUPT5HO00267 1087 aaKnown RBP17.98■□□□□ 0.47
NF1-203ENST00000422121 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
NF1-203ENST00000422121 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
NF1-203ENST00000422121 WDR62O43379 1518 aa17.93■□□□□ 0.46
NF1-203ENST00000422121 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
NF1-203ENST00000422121 URB2Q14146 1524 aaKnown RBP17.89■□□□□ 0.45
NF1-203ENST00000422121 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
NF1-203ENST00000422121 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
NF1-203ENST00000422121 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
NF1-203ENST00000422121 ABCC8Q09428 1581 aa17.66■□□□□ 0.42
NF1-203ENST00000422121 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
NF1-203ENST00000422121 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
NF1-203ENST00000422121 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
NF1-203ENST00000422121 CUX1P39880 1505 aa17.59■□□□□ 0.41
NF1-203ENST00000422121 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
NF1-203ENST00000422121 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
NF1-203ENST00000422121 RAD54L2Q9Y4B4 1467 aa17.55■□□□□ 0.4
NF1-203ENST00000422121 FGD5Q6ZNL6 1462 aa17.52■□□□□ 0.4
NF1-203ENST00000422121 SOGA1O94964 1423 aa17.52■□□□□ 0.4
NF1-203ENST00000422121 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
NF1-203ENST00000422121 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
NF1-203ENST00000422121 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
NF1-203ENST00000422121 WRNQ14191 1432 aaPredicted RBP eCLIP17.42■□□□□ 0.38
NF1-203ENST00000422121 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
NF1-203ENST00000422121 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
NF1-203ENST00000422121 TOP2BQ02880 1626 aa17.38■□□□□ 0.37
NF1-203ENST00000422121 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
NF1-203ENST00000422121 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
NF1-203ENST00000422121 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
NF1-203ENST00000422121 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
NF1-203ENST00000422121 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
NF1-203ENST00000422121 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
NF1-203ENST00000422121 ABCA5Q8WWZ7 1642 aa17.27■□□□□ 0.36
NF1-203ENST00000422121 FBLN2P98095 1184 aa17.25■□□□□ 0.35
NF1-203ENST00000422121 CHD1O14646 1710 aa17.24■□□□□ 0.35
NF1-203ENST00000422121 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
NF1-203ENST00000422121 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
NF1-203ENST00000422121 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
NF1-203ENST00000422121 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
NF1-203ENST00000422121 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
NF1-203ENST00000422121 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
NF1-203ENST00000422121 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
NF1-203ENST00000422121 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
NF1-203ENST00000422121 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
NF1-203ENST00000422121 ARHGEF11O15085 1522 aa17.1■□□□□ 0.33
NF1-203ENST00000422121 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
NF1-203ENST00000422121 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
NF1-203ENST00000422121 IGF1RP08069 1367 aa17.08■□□□□ 0.32
NF1-203ENST00000422121 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms