RNA–Protein interactions for RNA: ENST00000421894.1

HM13-IT1-201, HM13 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene HM13-IT1, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-IT1-201ENST00000421894 NISCHQ9Y2I1 1504 aa27.43■■□□□ 1.98
HM13-IT1-201ENST00000421894 CCDC180Q9P1Z9 1646 aa24.47■■□□□ 1.51
HM13-IT1-201ENST00000421894 ABCC9O60706 1549 aa23.94■■□□□ 1.42
HM13-IT1-201ENST00000421894 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
HM13-IT1-201ENST00000421894 NACADO15069 1562 aa23.04■■□□□ 1.28
HM13-IT1-201ENST00000421894 DCAF8L2P0C7V8 631 aa22.94■■□□□ 1.26
HM13-IT1-201ENST00000421894 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
HM13-IT1-201ENST00000421894 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
HM13-IT1-201ENST00000421894 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
HM13-IT1-201ENST00000421894 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
HM13-IT1-201ENST00000421894 UNC13AQ9UPW8 1703 aa22.47■■□□□ 1.19
HM13-IT1-201ENST00000421894 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
HM13-IT1-201ENST00000421894 BICRAQ9NZM4 1560 aa22.28■■□□□ 1.16
HM13-IT1-201ENST00000421894 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
HM13-IT1-201ENST00000421894 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
HM13-IT1-201ENST00000421894 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
HM13-IT1-201ENST00000421894 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
HM13-IT1-201ENST00000421894 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
HM13-IT1-201ENST00000421894 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
HM13-IT1-201ENST00000421894 SMARCA4P51532 1647 aa21.3■■□□□ 1
HM13-IT1-201ENST00000421894 NCAPD3P42695 1498 aa21.23■□□□□ 0.99
HM13-IT1-201ENST00000421894 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
HM13-IT1-201ENST00000421894 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
HM13-IT1-201ENST00000421894 HMGXB3Q12766 1538 aa21.14■□□□□ 0.97
HM13-IT1-201ENST00000421894 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
HM13-IT1-201ENST00000421894 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
HM13-IT1-201ENST00000421894 BAZ1BQ9UIG0 1483 aaKnown RBP21.06■□□□□ 0.96
HM13-IT1-201ENST00000421894 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
HM13-IT1-201ENST00000421894 WIZO95785 1651 aa20.87■□□□□ 0.93
HM13-IT1-201ENST00000421894 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
HM13-IT1-201ENST00000421894 ERCC6Q03468 1493 aa20.71■□□□□ 0.91
HM13-IT1-201ENST00000421894 LAMC3Q9Y6N6 1575 aa20.71■□□□□ 0.91
HM13-IT1-201ENST00000421894 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
HM13-IT1-201ENST00000421894 NESP48681 1621 aa20.66■□□□□ 0.9
HM13-IT1-201ENST00000421894 CADPSQ9ULU8 1353 aa20.61■□□□□ 0.89
HM13-IT1-201ENST00000421894 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
HM13-IT1-201ENST00000421894 CUX2O14529 1486 aa20.54■□□□□ 0.88
HM13-IT1-201ENST00000421894 CFTRP13569 1480 aa20.46■□□□□ 0.87
HM13-IT1-201ENST00000421894 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
HM13-IT1-201ENST00000421894 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
HM13-IT1-201ENST00000421894 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
HM13-IT1-201ENST00000421894 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
HM13-IT1-201ENST00000421894 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
HM13-IT1-201ENST00000421894 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
HM13-IT1-201ENST00000421894 PRDM2Q13029 1718 aa20.33■□□□□ 0.84
HM13-IT1-201ENST00000421894 WDR62O43379 1518 aa20.27■□□□□ 0.84
HM13-IT1-201ENST00000421894 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
HM13-IT1-201ENST00000421894 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
HM13-IT1-201ENST00000421894 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
HM13-IT1-201ENST00000421894 TOPBP1Q92547 1522 aa20.02■□□□□ 0.79
HM13-IT1-201ENST00000421894 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
HM13-IT1-201ENST00000421894 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
HM13-IT1-201ENST00000421894 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
HM13-IT1-201ENST00000421894 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
HM13-IT1-201ENST00000421894 CUX1P39880 1505 aa19.81■□□□□ 0.76
HM13-IT1-201ENST00000421894 TARBP1Q13395 1621 aaKnown RBP19.79■□□□□ 0.76
HM13-IT1-201ENST00000421894 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
HM13-IT1-201ENST00000421894 SOGA1O94964 1423 aa19.77■□□□□ 0.76
HM13-IT1-201ENST00000421894 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
HM13-IT1-201ENST00000421894 EIF4G3O43432 1585 aaKnown RBP19.74■□□□□ 0.75
HM13-IT1-201ENST00000421894 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
HM13-IT1-201ENST00000421894 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
HM13-IT1-201ENST00000421894 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
HM13-IT1-201ENST00000421894 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.74
HM13-IT1-201ENST00000421894 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
HM13-IT1-201ENST00000421894 OSCARQ8IYS5 282 aa19.66■□□□□ 0.74
HM13-IT1-201ENST00000421894 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
HM13-IT1-201ENST00000421894 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
HM13-IT1-201ENST00000421894 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
HM13-IT1-201ENST00000421894 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
HM13-IT1-201ENST00000421894 GRIN2BQ13224 1484 aa19.57■□□□□ 0.72
HM13-IT1-201ENST00000421894 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
HM13-IT1-201ENST00000421894 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
HM13-IT1-201ENST00000421894 SNAPC4Q5SXM2 1469 aa19.52■□□□□ 0.72
HM13-IT1-201ENST00000421894 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
HM13-IT1-201ENST00000421894 PBRM1Q86U86 1689 aa19.5■□□□□ 0.71
HM13-IT1-201ENST00000421894 FBLN2P98095 1184 aa19.5■□□□□ 0.71
HM13-IT1-201ENST00000421894 CHD1O14646 1710 aa19.5■□□□□ 0.71
HM13-IT1-201ENST00000421894 CHMP7Q8WUX9 453 aaPredicted RBP19.46■□□□□ 0.71
HM13-IT1-201ENST00000421894 SYNJ2O15056 1496 aa19.45■□□□□ 0.7
HM13-IT1-201ENST00000421894 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
HM13-IT1-201ENST00000421894 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
HM13-IT1-201ENST00000421894 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
HM13-IT1-201ENST00000421894 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
HM13-IT1-201ENST00000421894 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
HM13-IT1-201ENST00000421894 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
HM13-IT1-201ENST00000421894 KIF27Q86VH2 1401 aa19.32■□□□□ 0.68
HM13-IT1-201ENST00000421894 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
HM13-IT1-201ENST00000421894 GRIN2AQ12879 1464 aa19.3■□□□□ 0.68
HM13-IT1-201ENST00000421894 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
HM13-IT1-201ENST00000421894 CYB5RLQ6IPT4 315 aa19.27■□□□□ 0.68
HM13-IT1-201ENST00000421894 NUP160Q12769 1436 aa19.22■□□□□ 0.67
HM13-IT1-201ENST00000421894 CUL7Q14999 1698 aa19.21■□□□□ 0.67
HM13-IT1-201ENST00000421894 IGF1RP08069 1367 aa19.19■□□□□ 0.66
HM13-IT1-201ENST00000421894 CEP170Q5SW79 1584 aa19.18■□□□□ 0.66
HM13-IT1-201ENST00000421894 TRHP20396 242 aaPredicted RBP19.15■□□□□ 0.66
HM13-IT1-201ENST00000421894 ARAP1Q96P48 1450 aa19.12■□□□□ 0.65
HM13-IT1-201ENST00000421894 CARMIL1Q5VZK9 1371 aa19.11■□□□□ 0.65
HM13-IT1-201ENST00000421894 SHROOM2Q13796 1616 aa19.07■□□□□ 0.64
HM13-IT1-201ENST00000421894 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms