RNA–Protein interactions for RNA: ENST00000421539.1

CSF2RB-204, Transcript of colony stimulating factor 2 receptor beta common subunit, humanhuman

TSL 5

Gene CSF2RB, Length 969 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF2RB-204ENST00000421539 NISCHQ9Y2I1 1504 aa35■■■■□ 3.19
CSF2RB-204ENST00000421539 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
CSF2RB-204ENST00000421539 ABCC9O60706 1549 aa30.68■■■□□ 2.5
CSF2RB-204ENST00000421539 RB1CC1Q8TDY2 1594 aa29.48■■■□□ 2.31
CSF2RB-204ENST00000421539 DCAF8L2P0C7V8 631 aa29.44■■■□□ 2.3
CSF2RB-204ENST00000421539 NACADO15069 1562 aa29.41■■■□□ 2.3
CSF2RB-204ENST00000421539 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
CSF2RB-204ENST00000421539 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
CSF2RB-204ENST00000421539 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
CSF2RB-204ENST00000421539 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
CSF2RB-204ENST00000421539 UNC13AQ9UPW8 1703 aa28.63■■■□□ 2.17
CSF2RB-204ENST00000421539 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
CSF2RB-204ENST00000421539 SCRIBQ14160 1630 aa28.41■■■□□ 2.14
CSF2RB-204ENST00000421539 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
CSF2RB-204ENST00000421539 DNAJC5BQ9UF47 199 aa28.27■■■□□ 2.12
CSF2RB-204ENST00000421539 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
CSF2RB-204ENST00000421539 CC2D2AQ9P2K1 1620 aa27.72■■■□□ 2.03
CSF2RB-204ENST00000421539 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
CSF2RB-204ENST00000421539 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
CSF2RB-204ENST00000421539 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
CSF2RB-204ENST00000421539 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
CSF2RB-204ENST00000421539 SMARCA2P51531 1590 aa27.1■■□□□ 1.93
CSF2RB-204ENST00000421539 ATAD2BQ9ULI0 1458 aa27.1■■□□□ 1.93
CSF2RB-204ENST00000421539 HMGXB3Q12766 1538 aa26.96■■□□□ 1.91
CSF2RB-204ENST00000421539 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
CSF2RB-204ENST00000421539 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
CSF2RB-204ENST00000421539 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
CSF2RB-204ENST00000421539 WIZO95785 1651 aa26.6■■□□□ 1.85
CSF2RB-204ENST00000421539 RSF1Q96T23 1441 aaPredicted RBP26.6■■□□□ 1.85
CSF2RB-204ENST00000421539 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
CSF2RB-204ENST00000421539 NESP48681 1621 aa26.45■■□□□ 1.82
CSF2RB-204ENST00000421539 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
CSF2RB-204ENST00000421539 TOP2AP11388 1531 aaKnown RBP26.37■■□□□ 1.81
CSF2RB-204ENST00000421539 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
CSF2RB-204ENST00000421539 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
CSF2RB-204ENST00000421539 CUX2O14529 1486 aa26.3■■□□□ 1.8
CSF2RB-204ENST00000421539 CFTRP13569 1480 aa26.13■■□□□ 1.77
CSF2RB-204ENST00000421539 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
CSF2RB-204ENST00000421539 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
CSF2RB-204ENST00000421539 CCDC88BA6NC98 1476 aa26.07■■□□□ 1.76
CSF2RB-204ENST00000421539 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
CSF2RB-204ENST00000421539 FANCD2Q9BXW9 1451 aa26.03■■□□□ 1.76
CSF2RB-204ENST00000421539 MRC2Q9UBG0 1479 aa26.02■■□□□ 1.76
CSF2RB-204ENST00000421539 WDR62O43379 1518 aa25.89■■□□□ 1.74
CSF2RB-204ENST00000421539 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
CSF2RB-204ENST00000421539 PRDM2Q13029 1718 aa25.83■■□□□ 1.72
CSF2RB-204ENST00000421539 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
CSF2RB-204ENST00000421539 DNAJC5Q9H3Z4 198 aa25.71■■□□□ 1.71
CSF2RB-204ENST00000421539 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
CSF2RB-204ENST00000421539 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
CSF2RB-204ENST00000421539 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
CSF2RB-204ENST00000421539 IFT140Q96RY7 1462 aa25.51■■□□□ 1.67
CSF2RB-204ENST00000421539 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
CSF2RB-204ENST00000421539 ZNF608Q9ULD9 1512 aaPredicted RBP25.31■■□□□ 1.64
CSF2RB-204ENST00000421539 SOGA1O94964 1423 aa25.29■■□□□ 1.64
CSF2RB-204ENST00000421539 CUX1P39880 1505 aa25.27■■□□□ 1.64
CSF2RB-204ENST00000421539 OSCARQ8IYS5 282 aa25.26■■□□□ 1.63
CSF2RB-204ENST00000421539 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
CSF2RB-204ENST00000421539 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
CSF2RB-204ENST00000421539 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
CSF2RB-204ENST00000421539 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
CSF2RB-204ENST00000421539 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.62
CSF2RB-204ENST00000421539 TDRD9Q8NDG6 1382 aaKnown RBP25.15■■□□□ 1.62
CSF2RB-204ENST00000421539 WDR97A6NE52 1622 aa25.14■■□□□ 1.61
CSF2RB-204ENST00000421539 WRNQ14191 1432 aaPredicted RBP eCLIP25.13■■□□□ 1.61
CSF2RB-204ENST00000421539 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
CSF2RB-204ENST00000421539 FBLN2P98095 1184 aa25.03■■□□□ 1.6
CSF2RB-204ENST00000421539 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
CSF2RB-204ENST00000421539 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
CSF2RB-204ENST00000421539 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
CSF2RB-204ENST00000421539 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
CSF2RB-204ENST00000421539 SYNJ1O43426 1573 aa24.97■■□□□ 1.59
CSF2RB-204ENST00000421539 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
CSF2RB-204ENST00000421539 CHMP7Q8WUX9 453 aaPredicted RBP24.96■■□□□ 1.59
CSF2RB-204ENST00000421539 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
CSF2RB-204ENST00000421539 CHD1O14646 1710 aa24.88■■□□□ 1.57
CSF2RB-204ENST00000421539 ABCA5Q8WWZ7 1642 aa24.87■■□□□ 1.57
CSF2RB-204ENST00000421539 SYNJ2O15056 1496 aa24.86■■□□□ 1.57
CSF2RB-204ENST00000421539 PBRM1Q86U86 1689 aa24.84■■□□□ 1.57
CSF2RB-204ENST00000421539 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
CSF2RB-204ENST00000421539 ERICH3Q5RHP9 1530 aa24.74■■□□□ 1.55
CSF2RB-204ENST00000421539 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
CSF2RB-204ENST00000421539 RIMBP3CA6NJZ7 1639 aa24.71■■□□□ 1.55
CSF2RB-204ENST00000421539 RIMBP3BA6NNM3 1639 aa24.71■■□□□ 1.55
CSF2RB-204ENST00000421539 RIMBP3Q9UFD9 1639 aa24.71■■□□□ 1.55
CSF2RB-204ENST00000421539 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
CSF2RB-204ENST00000421539 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
CSF2RB-204ENST00000421539 ADAMTS12P58397 1594 aa24.66■■□□□ 1.54
CSF2RB-204ENST00000421539 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
CSF2RB-204ENST00000421539 CLASP1Q7Z460 1538 aa24.65■■□□□ 1.54
CSF2RB-204ENST00000421539 CYB5RLQ6IPT4 315 aa24.59■■□□□ 1.53
CSF2RB-204ENST00000421539 NUP160Q12769 1436 aa24.55■■□□□ 1.52
CSF2RB-204ENST00000421539 IGF1RP08069 1367 aa24.54■■□□□ 1.52
CSF2RB-204ENST00000421539 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
CSF2RB-204ENST00000421539 CEP170Q5SW79 1584 aa24.48■■□□□ 1.51
CSF2RB-204ENST00000421539 CUL7Q14999 1698 aa24.46■■□□□ 1.51
CSF2RB-204ENST00000421539 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
CSF2RB-204ENST00000421539 JPH4Q96JJ6 628 aa24.38■■□□□ 1.49
CSF2RB-204ENST00000421539 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
CSF2RB-204ENST00000421539 KIAA0586Q9BVV6 1533 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms