RNA–Protein interactions for RNA: ENST00000421496.5

GGCX-202, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-202ENST00000421496 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
GGCX-202ENST00000421496 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.57
GGCX-202ENST00000421496 ABCC9O60706 1549 aa24.62■■□□□ 1.53
GGCX-202ENST00000421496 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
GGCX-202ENST00000421496 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
GGCX-202ENST00000421496 NACADO15069 1562 aa23.43■■□□□ 1.34
GGCX-202ENST00000421496 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
GGCX-202ENST00000421496 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
GGCX-202ENST00000421496 UNC13AQ9UPW8 1703 aa23.04■■□□□ 1.28
GGCX-202ENST00000421496 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
GGCX-202ENST00000421496 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
GGCX-202ENST00000421496 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
GGCX-202ENST00000421496 BICRAQ9NZM4 1560 aa22.83■■□□□ 1.25
GGCX-202ENST00000421496 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
GGCX-202ENST00000421496 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
GGCX-202ENST00000421496 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
GGCX-202ENST00000421496 CC2D2AQ9P2K1 1620 aa22.23■■□□□ 1.15
GGCX-202ENST00000421496 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
GGCX-202ENST00000421496 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
GGCX-202ENST00000421496 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
GGCX-202ENST00000421496 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
GGCX-202ENST00000421496 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
GGCX-202ENST00000421496 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
GGCX-202ENST00000421496 MROH2BQ7Z745 1585 aa21.5■■□□□ 1.03
GGCX-202ENST00000421496 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
GGCX-202ENST00000421496 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
GGCX-202ENST00000421496 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
GGCX-202ENST00000421496 WIZO95785 1651 aa21.28■■□□□ 1
GGCX-202ENST00000421496 NESP48681 1621 aa21.24■□□□□ 0.99
GGCX-202ENST00000421496 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
GGCX-202ENST00000421496 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
GGCX-202ENST00000421496 LAMC3Q9Y6N6 1575 aa21.1■□□□□ 0.97
GGCX-202ENST00000421496 CUX2O14529 1486 aa21.03■□□□□ 0.96
GGCX-202ENST00000421496 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
GGCX-202ENST00000421496 PDS5BQ9NTI5 1447 aa20.99■□□□□ 0.95
GGCX-202ENST00000421496 TOP2AP11388 1531 aaKnown RBP20.98■□□□□ 0.95
GGCX-202ENST00000421496 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
GGCX-202ENST00000421496 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.94
GGCX-202ENST00000421496 CFTRP13569 1480 aa20.82■□□□□ 0.92
GGCX-202ENST00000421496 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
GGCX-202ENST00000421496 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
GGCX-202ENST00000421496 MRC2Q9UBG0 1479 aa20.76■□□□□ 0.91
GGCX-202ENST00000421496 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
GGCX-202ENST00000421496 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
GGCX-202ENST00000421496 WDR62O43379 1518 aa20.68■□□□□ 0.9
GGCX-202ENST00000421496 PRDM2Q13029 1718 aa20.64■□□□□ 0.89
GGCX-202ENST00000421496 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
GGCX-202ENST00000421496 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
GGCX-202ENST00000421496 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
GGCX-202ENST00000421496 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
GGCX-202ENST00000421496 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
GGCX-202ENST00000421496 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
GGCX-202ENST00000421496 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
GGCX-202ENST00000421496 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
GGCX-202ENST00000421496 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
GGCX-202ENST00000421496 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
GGCX-202ENST00000421496 SOGA1O94964 1423 aa20.18■□□□□ 0.82
GGCX-202ENST00000421496 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
GGCX-202ENST00000421496 CUX1P39880 1505 aa20.17■□□□□ 0.82
GGCX-202ENST00000421496 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
GGCX-202ENST00000421496 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
GGCX-202ENST00000421496 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
GGCX-202ENST00000421496 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
GGCX-202ENST00000421496 FBLN2P98095 1184 aa20.04■□□□□ 0.8
GGCX-202ENST00000421496 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
GGCX-202ENST00000421496 CHD1O14646 1710 aa19.99■□□□□ 0.79
GGCX-202ENST00000421496 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
GGCX-202ENST00000421496 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
GGCX-202ENST00000421496 SNAPC4Q5SXM2 1469 aa19.93■□□□□ 0.78
GGCX-202ENST00000421496 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
GGCX-202ENST00000421496 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
GGCX-202ENST00000421496 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
GGCX-202ENST00000421496 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
GGCX-202ENST00000421496 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
GGCX-202ENST00000421496 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
GGCX-202ENST00000421496 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
GGCX-202ENST00000421496 MAGI1Q96QZ7 1491 aaPredicted RBP19.87■□□□□ 0.77
GGCX-202ENST00000421496 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
GGCX-202ENST00000421496 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
GGCX-202ENST00000421496 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
GGCX-202ENST00000421496 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
GGCX-202ENST00000421496 ABCA5Q8WWZ7 1642 aa19.84■□□□□ 0.77
GGCX-202ENST00000421496 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
GGCX-202ENST00000421496 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
GGCX-202ENST00000421496 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
GGCX-202ENST00000421496 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
GGCX-202ENST00000421496 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
GGCX-202ENST00000421496 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
GGCX-202ENST00000421496 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
GGCX-202ENST00000421496 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
GGCX-202ENST00000421496 ARAP1Q96P48 1450 aa19.65■□□□□ 0.74
GGCX-202ENST00000421496 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
GGCX-202ENST00000421496 NUP160Q12769 1436 aa19.58■□□□□ 0.72
GGCX-202ENST00000421496 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
GGCX-202ENST00000421496 IGF1RP08069 1367 aa19.55■□□□□ 0.72
GGCX-202ENST00000421496 ERCC6L2Q5T890 1561 aa19.48■□□□□ 0.71
GGCX-202ENST00000421496 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
GGCX-202ENST00000421496 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
GGCX-202ENST00000421496 SHROOM2Q13796 1616 aa19.44■□□□□ 0.7
GGCX-202ENST00000421496 CUL7Q14999 1698 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 1638 ms