RNA–Protein interactions for RNA: ENST00000421423.1

LINC00403-201, humanhuman

TSL 2 BASIC

Gene LINC00403, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00403-201ENST00000421423 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
LINC00403-201ENST00000421423 ABCC9O60706 1549 aa24.13■■□□□ 1.45
LINC00403-201ENST00000421423 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
LINC00403-201ENST00000421423 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
LINC00403-201ENST00000421423 NACADO15069 1562 aa22.78■■□□□ 1.24
LINC00403-201ENST00000421423 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
LINC00403-201ENST00000421423 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
LINC00403-201ENST00000421423 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
LINC00403-201ENST00000421423 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
LINC00403-201ENST00000421423 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
LINC00403-201ENST00000421423 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
LINC00403-201ENST00000421423 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
LINC00403-201ENST00000421423 DCAF1Q9Y4B6 1507 aa22.14■■□□□ 1.13
LINC00403-201ENST00000421423 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
LINC00403-201ENST00000421423 SCRIBQ14160 1630 aa21.85■■□□□ 1.09
LINC00403-201ENST00000421423 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
LINC00403-201ENST00000421423 CECR2Q9BXF3 1484 aa21.76■■□□□ 1.07
LINC00403-201ENST00000421423 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
LINC00403-201ENST00000421423 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
LINC00403-201ENST00000421423 DNAJC5Q9H3Z4 198 aa21.01■□□□□ 0.95
LINC00403-201ENST00000421423 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
LINC00403-201ENST00000421423 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
LINC00403-201ENST00000421423 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
LINC00403-201ENST00000421423 CUX2O14529 1486 aa20.85■□□□□ 0.93
LINC00403-201ENST00000421423 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
LINC00403-201ENST00000421423 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
LINC00403-201ENST00000421423 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
LINC00403-201ENST00000421423 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
LINC00403-201ENST00000421423 PEG3Q9GZU2 1588 aa20.69■□□□□ 0.9
LINC00403-201ENST00000421423 NESP48681 1621 aa20.69■□□□□ 0.9
LINC00403-201ENST00000421423 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
LINC00403-201ENST00000421423 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
LINC00403-201ENST00000421423 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
LINC00403-201ENST00000421423 CADPSQ9ULU8 1353 aa20.45■□□□□ 0.86
LINC00403-201ENST00000421423 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
LINC00403-201ENST00000421423 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
LINC00403-201ENST00000421423 WIZO95785 1651 aa20.34■□□□□ 0.85
LINC00403-201ENST00000421423 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.84
LINC00403-201ENST00000421423 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
LINC00403-201ENST00000421423 WDR62O43379 1518 aa20.19■□□□□ 0.82
LINC00403-201ENST00000421423 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
LINC00403-201ENST00000421423 CFTRP13569 1480 aa20.17■□□□□ 0.82
LINC00403-201ENST00000421423 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
LINC00403-201ENST00000421423 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
LINC00403-201ENST00000421423 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
LINC00403-201ENST00000421423 OSCARQ8IYS5 282 aa20■□□□□ 0.79
LINC00403-201ENST00000421423 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
LINC00403-201ENST00000421423 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
LINC00403-201ENST00000421423 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
LINC00403-201ENST00000421423 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
LINC00403-201ENST00000421423 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
LINC00403-201ENST00000421423 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
LINC00403-201ENST00000421423 ZNF608Q9ULD9 1512 aaPredicted RBP19.74■□□□□ 0.75
LINC00403-201ENST00000421423 DNMBPQ6XZF7 1577 aa19.66■□□□□ 0.74
LINC00403-201ENST00000421423 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
LINC00403-201ENST00000421423 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
LINC00403-201ENST00000421423 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
LINC00403-201ENST00000421423 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
LINC00403-201ENST00000421423 TARBP1Q13395 1621 aaKnown RBP19.56■□□□□ 0.72
LINC00403-201ENST00000421423 EIF4G3O43432 1585 aaKnown RBP19.56■□□□□ 0.72
LINC00403-201ENST00000421423 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
LINC00403-201ENST00000421423 FBLN2P98095 1184 aa19.54■□□□□ 0.72
LINC00403-201ENST00000421423 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
LINC00403-201ENST00000421423 SOGA1O94964 1423 aa19.52■□□□□ 0.72
LINC00403-201ENST00000421423 CYB5RLQ6IPT4 315 aa19.51■□□□□ 0.71
LINC00403-201ENST00000421423 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
LINC00403-201ENST00000421423 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
LINC00403-201ENST00000421423 CHD1O14646 1710 aa19.42■□□□□ 0.7
LINC00403-201ENST00000421423 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
LINC00403-201ENST00000421423 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
LINC00403-201ENST00000421423 CUX1P39880 1505 aa19.38■□□□□ 0.69
LINC00403-201ENST00000421423 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
LINC00403-201ENST00000421423 SNAPC4Q5SXM2 1469 aa19.34■□□□□ 0.69
LINC00403-201ENST00000421423 GRIN2BQ13224 1484 aa19.33■□□□□ 0.68
LINC00403-201ENST00000421423 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
LINC00403-201ENST00000421423 SUPT5HO00267 1087 aaKnown RBP19.32■□□□□ 0.68
LINC00403-201ENST00000421423 MAGI1Q96QZ7 1491 aaPredicted RBP19.32■□□□□ 0.68
LINC00403-201ENST00000421423 TRHP20396 242 aaPredicted RBP19.31■□□□□ 0.68
LINC00403-201ENST00000421423 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
LINC00403-201ENST00000421423 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
LINC00403-201ENST00000421423 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
LINC00403-201ENST00000421423 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
LINC00403-201ENST00000421423 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
LINC00403-201ENST00000421423 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
LINC00403-201ENST00000421423 PBRM1Q86U86 1689 aa19.13■□□□□ 0.65
LINC00403-201ENST00000421423 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
LINC00403-201ENST00000421423 GRIN2AQ12879 1464 aa19.05■□□□□ 0.64
LINC00403-201ENST00000421423 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
LINC00403-201ENST00000421423 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
LINC00403-201ENST00000421423 NUP160Q12769 1436 aa19.01■□□□□ 0.63
LINC00403-201ENST00000421423 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
LINC00403-201ENST00000421423 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
LINC00403-201ENST00000421423 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
LINC00403-201ENST00000421423 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
LINC00403-201ENST00000421423 JPH4Q96JJ6 628 aa18.92■□□□□ 0.62
LINC00403-201ENST00000421423 ERCC6L2Q5T890 1561 aa18.92■□□□□ 0.62
LINC00403-201ENST00000421423 SHROOM2Q13796 1616 aa18.87■□□□□ 0.61
LINC00403-201ENST00000421423 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
LINC00403-201ENST00000421423 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
LINC00403-201ENST00000421423 IGF1RP08069 1367 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms