RNA–Protein interactions for RNA: ENST00000421398.5

C1orf228-204, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 3

Gene C1orf228, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-204ENST00000421398 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
C1orf228-204ENST00000421398 CCDC180Q9P1Z9 1646 aa24.87■■□□□ 1.57
C1orf228-204ENST00000421398 ABCC9O60706 1549 aa24.41■■□□□ 1.5
C1orf228-204ENST00000421398 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
C1orf228-204ENST00000421398 NACADO15069 1562 aa23.35■■□□□ 1.33
C1orf228-204ENST00000421398 MYO15BQ96JP2 1530 aa23.12■■□□□ 1.29
C1orf228-204ENST00000421398 UNC13AQ9UPW8 1703 aa23.03■■□□□ 1.28
C1orf228-204ENST00000421398 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
C1orf228-204ENST00000421398 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
C1orf228-204ENST00000421398 DCAF1Q9Y4B6 1507 aa22.9■■□□□ 1.26
C1orf228-204ENST00000421398 BICRAQ9NZM4 1560 aa22.73■■□□□ 1.23
C1orf228-204ENST00000421398 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
C1orf228-204ENST00000421398 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
C1orf228-204ENST00000421398 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
C1orf228-204ENST00000421398 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
C1orf228-204ENST00000421398 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
C1orf228-204ENST00000421398 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
C1orf228-204ENST00000421398 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
C1orf228-204ENST00000421398 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
C1orf228-204ENST00000421398 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
C1orf228-204ENST00000421398 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
C1orf228-204ENST00000421398 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
C1orf228-204ENST00000421398 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
C1orf228-204ENST00000421398 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
C1orf228-204ENST00000421398 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
C1orf228-204ENST00000421398 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
C1orf228-204ENST00000421398 MROH2BQ7Z745 1585 aa21.27■□□□□ 0.99
C1orf228-204ENST00000421398 ERCC6Q03468 1493 aa21.1■□□□□ 0.97
C1orf228-204ENST00000421398 WIZO95785 1651 aa21.08■□□□□ 0.96
C1orf228-204ENST00000421398 LAMC3Q9Y6N6 1575 aa21.05■□□□□ 0.96
C1orf228-204ENST00000421398 NESP48681 1621 aa21.04■□□□□ 0.96
C1orf228-204ENST00000421398 CUX2O14529 1486 aa21.03■□□□□ 0.96
C1orf228-204ENST00000421398 KIF21AQ7Z4S6 1674 aa20.93■□□□□ 0.94
C1orf228-204ENST00000421398 THOC2Q8NI27 1593 aaKnown RBP20.92■□□□□ 0.94
C1orf228-204ENST00000421398 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
C1orf228-204ENST00000421398 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
C1orf228-204ENST00000421398 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
C1orf228-204ENST00000421398 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
C1orf228-204ENST00000421398 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
C1orf228-204ENST00000421398 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
C1orf228-204ENST00000421398 WDR62O43379 1518 aa20.65■□□□□ 0.9
C1orf228-204ENST00000421398 CFTRP13569 1480 aa20.65■□□□□ 0.9
C1orf228-204ENST00000421398 CEP164Q9UPV0 1460 aa20.64■□□□□ 0.89
C1orf228-204ENST00000421398 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
C1orf228-204ENST00000421398 DNAJC5Q9H3Z4 198 aa20.58■□□□□ 0.89
C1orf228-204ENST00000421398 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
C1orf228-204ENST00000421398 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
C1orf228-204ENST00000421398 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
C1orf228-204ENST00000421398 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
C1orf228-204ENST00000421398 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
C1orf228-204ENST00000421398 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
C1orf228-204ENST00000421398 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
C1orf228-204ENST00000421398 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
C1orf228-204ENST00000421398 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
C1orf228-204ENST00000421398 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
C1orf228-204ENST00000421398 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
C1orf228-204ENST00000421398 WDR97A6NE52 1622 aa20.01■□□□□ 0.79
C1orf228-204ENST00000421398 CUX1P39880 1505 aa19.99■□□□□ 0.79
C1orf228-204ENST00000421398 CHD1O14646 1710 aa19.97■□□□□ 0.79
C1orf228-204ENST00000421398 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
C1orf228-204ENST00000421398 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
C1orf228-204ENST00000421398 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
C1orf228-204ENST00000421398 SOGA1O94964 1423 aa19.91■□□□□ 0.78
C1orf228-204ENST00000421398 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.78
C1orf228-204ENST00000421398 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
C1orf228-204ENST00000421398 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
C1orf228-204ENST00000421398 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
C1orf228-204ENST00000421398 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
C1orf228-204ENST00000421398 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
C1orf228-204ENST00000421398 TDRD9Q8NDG6 1382 aaKnown RBP19.8■□□□□ 0.76
C1orf228-204ENST00000421398 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
C1orf228-204ENST00000421398 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
C1orf228-204ENST00000421398 SNAPC4Q5SXM2 1469 aa19.79■□□□□ 0.76
C1orf228-204ENST00000421398 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
C1orf228-204ENST00000421398 GRIN2BQ13224 1484 aa19.77■□□□□ 0.76
C1orf228-204ENST00000421398 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
C1orf228-204ENST00000421398 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
C1orf228-204ENST00000421398 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
C1orf228-204ENST00000421398 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
C1orf228-204ENST00000421398 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
C1orf228-204ENST00000421398 GAPVD1Q14C86 1478 aa19.72■□□□□ 0.75
C1orf228-204ENST00000421398 SYNJ2O15056 1496 aa19.69■□□□□ 0.74
C1orf228-204ENST00000421398 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
C1orf228-204ENST00000421398 FBLN2P98095 1184 aa19.68■□□□□ 0.74
C1orf228-204ENST00000421398 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
C1orf228-204ENST00000421398 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
C1orf228-204ENST00000421398 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
C1orf228-204ENST00000421398 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
C1orf228-204ENST00000421398 GRIN2AQ12879 1464 aa19.53■□□□□ 0.72
C1orf228-204ENST00000421398 FHAD1B1AJZ9 1412 aa19.48■□□□□ 0.71
C1orf228-204ENST00000421398 CEP170Q5SW79 1584 aa19.48■□□□□ 0.71
C1orf228-204ENST00000421398 NUP160Q12769 1436 aa19.43■□□□□ 0.7
C1orf228-204ENST00000421398 CYB5RLQ6IPT4 315 aa19.43■□□□□ 0.7
C1orf228-204ENST00000421398 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
C1orf228-204ENST00000421398 CUL7Q14999 1698 aa19.4■□□□□ 0.7
C1orf228-204ENST00000421398 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
C1orf228-204ENST00000421398 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
C1orf228-204ENST00000421398 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
C1orf228-204ENST00000421398 IGF1RP08069 1367 aa19.21■□□□□ 0.67
C1orf228-204ENST00000421398 PRG4Q92954 1404 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms