RNA–Protein interactions for RNA: ENST00000421359.5

TTC38-203, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 4

Gene TTC38, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-203ENST00000421359 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
TTC38-203ENST00000421359 CCDC180Q9P1Z9 1646 aa34.63■■■■□ 3.13
TTC38-203ENST00000421359 ABCC9O60706 1549 aa34.4■■■■□ 3.1
TTC38-203ENST00000421359 RB1CC1Q8TDY2 1594 aa32.93■■■□□ 2.86
TTC38-203ENST00000421359 NACADO15069 1562 aa32.74■■■□□ 2.83
TTC38-203ENST00000421359 DCAF8L2P0C7V8 631 aa32.62■■■□□ 2.81
TTC38-203ENST00000421359 MYO15BQ96JP2 1530 aa32.33■■■□□ 2.77
TTC38-203ENST00000421359 PABPN1Q86U42 306 aaKnown RBP eCLIP32.03■■■□□ 2.72
TTC38-203ENST00000421359 DNAJC5BQ9UF47 199 aa31.98■■■□□ 2.71
TTC38-203ENST00000421359 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
TTC38-203ENST00000421359 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
TTC38-203ENST00000421359 DCAF1Q9Y4B6 1507 aa31.94■■■□□ 2.7
TTC38-203ENST00000421359 BICRAQ9NZM4 1560 aa31.74■■■□□ 2.67
TTC38-203ENST00000421359 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
TTC38-203ENST00000421359 SCRIBQ14160 1630 aa31.46■■■□□ 2.63
TTC38-203ENST00000421359 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
TTC38-203ENST00000421359 EIF4G1Q04637 1599 aaKnown RBP31.07■■■□□ 2.56
TTC38-203ENST00000421359 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
TTC38-203ENST00000421359 NCAPD3P42695 1498 aa30.16■■■□□ 2.42
TTC38-203ENST00000421359 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
TTC38-203ENST00000421359 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
TTC38-203ENST00000421359 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
TTC38-203ENST00000421359 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
TTC38-203ENST00000421359 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
TTC38-203ENST00000421359 ERCC6Q03468 1493 aa29.85■■■□□ 2.37
TTC38-203ENST00000421359 BAZ1BQ9UIG0 1483 aaKnown RBP29.85■■■□□ 2.37
TTC38-203ENST00000421359 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
TTC38-203ENST00000421359 CUX2O14529 1486 aa29.73■■■□□ 2.35
TTC38-203ENST00000421359 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.33
TTC38-203ENST00000421359 LAMC3Q9Y6N6 1575 aa29.52■■■□□ 2.32
TTC38-203ENST00000421359 NESP48681 1621 aa29.5■■■□□ 2.31
TTC38-203ENST00000421359 DNAJC5Q9H3Z4 198 aa29.49■■■□□ 2.31
TTC38-203ENST00000421359 PDS5BQ9NTI5 1447 aa29.41■■■□□ 2.3
TTC38-203ENST00000421359 WIZO95785 1651 aa29.29■■■□□ 2.28
TTC38-203ENST00000421359 CADPSQ9ULU8 1353 aa29.28■■■□□ 2.28
TTC38-203ENST00000421359 THOC2Q8NI27 1593 aaKnown RBP29.22■■■□□ 2.27
TTC38-203ENST00000421359 KIF21AQ7Z4S6 1674 aa29.18■■■□□ 2.26
TTC38-203ENST00000421359 RSF1Q96T23 1441 aaPredicted RBP29.12■■■□□ 2.25
TTC38-203ENST00000421359 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
TTC38-203ENST00000421359 TOP2AP11388 1531 aaKnown RBP29.03■■■□□ 2.24
TTC38-203ENST00000421359 CEP164Q9UPV0 1460 aa28.99■■■□□ 2.23
TTC38-203ENST00000421359 CFTRP13569 1480 aa28.94■■■□□ 2.22
TTC38-203ENST00000421359 WDR62O43379 1518 aa28.93■■■□□ 2.22
TTC38-203ENST00000421359 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
TTC38-203ENST00000421359 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
TTC38-203ENST00000421359 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
TTC38-203ENST00000421359 URB2Q14146 1524 aaKnown RBP28.58■■■□□ 2.17
TTC38-203ENST00000421359 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
TTC38-203ENST00000421359 OSCARQ8IYS5 282 aa28.44■■■□□ 2.14
TTC38-203ENST00000421359 IFT140Q96RY7 1462 aa28.42■■■□□ 2.14
TTC38-203ENST00000421359 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
TTC38-203ENST00000421359 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
TTC38-203ENST00000421359 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
TTC38-203ENST00000421359 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
TTC38-203ENST00000421359 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
TTC38-203ENST00000421359 POLA1P09884 1462 aaPredicted RBP28.07■■■□□ 2.08
TTC38-203ENST00000421359 TARBP1Q13395 1621 aaKnown RBP28.04■■■□□ 2.08
TTC38-203ENST00000421359 SUPT5HO00267 1087 aaKnown RBP28.02■■■□□ 2.08
TTC38-203ENST00000421359 SOGA1O94964 1423 aa28.01■■■□□ 2.08
TTC38-203ENST00000421359 AQRO60306 1485 aaKnown RBP eCLIP28■■■□□ 2.074e-8■■■■■ 39.8
TTC38-203ENST00000421359 WDR97A6NE52 1622 aa27.96■■■□□ 2.07
TTC38-203ENST00000421359 FBLN2P98095 1184 aa27.95■■■□□ 2.06
TTC38-203ENST00000421359 FGD5Q6ZNL6 1462 aa27.92■■■□□ 2.06
TTC38-203ENST00000421359 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
TTC38-203ENST00000421359 RIMBP3CA6NJZ7 1639 aa27.88■■■□□ 2.05
TTC38-203ENST00000421359 RIMBP3BA6NNM3 1639 aa27.88■■■□□ 2.05
TTC38-203ENST00000421359 RIMBP3Q9UFD9 1639 aa27.88■■■□□ 2.05
TTC38-203ENST00000421359 TDRD9Q8NDG6 1382 aaKnown RBP27.87■■■□□ 2.05
TTC38-203ENST00000421359 CUX1P39880 1505 aa27.86■■■□□ 2.05
TTC38-203ENST00000421359 CHD1O14646 1710 aa27.85■■■□□ 2.05
TTC38-203ENST00000421359 ARHGEF11O15085 1522 aa27.83■■■□□ 2.05
TTC38-203ENST00000421359 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
TTC38-203ENST00000421359 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
TTC38-203ENST00000421359 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
TTC38-203ENST00000421359 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
TTC38-203ENST00000421359 CYB5RLQ6IPT4 315 aa27.69■■■□□ 2.02
TTC38-203ENST00000421359 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
TTC38-203ENST00000421359 GAPVD1Q14C86 1478 aa27.68■■■□□ 2.02
TTC38-203ENST00000421359 SYNJ2O15056 1496 aa27.65■■■□□ 2.02
TTC38-203ENST00000421359 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
TTC38-203ENST00000421359 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
TTC38-203ENST00000421359 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
TTC38-203ENST00000421359 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
TTC38-203ENST00000421359 CLASP1Q7Z460 1538 aa27.53■■■□□ 2
TTC38-203ENST00000421359 ARAP1Q96P48 1450 aa27.52■■■□□ 2
TTC38-203ENST00000421359 TOP2BQ02880 1626 aa27.52■■■□□ 2
TTC38-203ENST00000421359 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
TTC38-203ENST00000421359 TRHP20396 242 aaPredicted RBP27.43■■□□□ 1.98
TTC38-203ENST00000421359 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
TTC38-203ENST00000421359 FHAD1B1AJZ9 1412 aa27.36■■□□□ 1.97
TTC38-203ENST00000421359 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
TTC38-203ENST00000421359 ADAMTS12P58397 1594 aa27.33■■□□□ 1.97
TTC38-203ENST00000421359 NUP160Q12769 1436 aa27.25■■□□□ 1.95
TTC38-203ENST00000421359 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
TTC38-203ENST00000421359 KIF27Q86VH2 1401 aa27.1■■□□□ 1.93
TTC38-203ENST00000421359 SHROOM2Q13796 1616 aa27.08■■□□□ 1.93
TTC38-203ENST00000421359 JPH4Q96JJ6 628 aa27.05■■□□□ 1.92
TTC38-203ENST00000421359 PRG4Q92954 1404 aaPredicted RBP27.02■■□□□ 1.92
TTC38-203ENST00000421359 ERCC6L2Q5T890 1561 aa27■■□□□ 1.91
TTC38-203ENST00000421359 CUL7Q14999 1698 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms