RNA–Protein interactions for RNA: ENST00000421198.5

CHL1-203, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 4

Gene CHL1, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-203ENST00000421198 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
CHL1-203ENST00000421198 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
CHL1-203ENST00000421198 ABCC9O60706 1549 aa28.75■■■□□ 2.19
CHL1-203ENST00000421198 RB1CC1Q8TDY2 1594 aa27.65■■■□□ 2.02
CHL1-203ENST00000421198 NACADO15069 1562 aa27.63■■■□□ 2.01
CHL1-203ENST00000421198 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
CHL1-203ENST00000421198 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
CHL1-203ENST00000421198 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
CHL1-203ENST00000421198 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
CHL1-203ENST00000421198 UNC13AQ9UPW8 1703 aa26.98■■□□□ 1.91
CHL1-203ENST00000421198 PABPN1Q86U42 306 aaKnown RBP eCLIP26.9■■□□□ 1.9
CHL1-203ENST00000421198 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
CHL1-203ENST00000421198 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
CHL1-203ENST00000421198 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
CHL1-203ENST00000421198 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
CHL1-203ENST00000421198 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
CHL1-203ENST00000421198 CC2D2AQ9P2K1 1620 aa26■■□□□ 1.75
CHL1-203ENST00000421198 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
CHL1-203ENST00000421198 AEBP2Q6ZN18 517 aaPredicted RBP25.67■■□□□ 1.7
CHL1-203ENST00000421198 SMARCA4P51532 1647 aa25.6■■□□□ 1.69
CHL1-203ENST00000421198 BAZ1AQ9NRL2 1556 aaPredicted RBP25.59■■□□□ 1.69
CHL1-203ENST00000421198 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
CHL1-203ENST00000421198 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.67
CHL1-203ENST00000421198 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
CHL1-203ENST00000421198 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
CHL1-203ENST00000421198 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
CHL1-203ENST00000421198 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
CHL1-203ENST00000421198 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
CHL1-203ENST00000421198 RSF1Q96T23 1441 aaPredicted RBP25.16■■□□□ 1.62
CHL1-203ENST00000421198 WIZO95785 1651 aa25.14■■□□□ 1.62
CHL1-203ENST00000421198 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
CHL1-203ENST00000421198 NESP48681 1621 aa24.87■■□□□ 1.57
CHL1-203ENST00000421198 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
CHL1-203ENST00000421198 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
CHL1-203ENST00000421198 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
CHL1-203ENST00000421198 PDS5BQ9NTI5 1447 aa24.68■■□□□ 1.54
CHL1-203ENST00000421198 CCDC88BA6NC98 1476 aa24.62■■□□□ 1.53
CHL1-203ENST00000421198 CFTRP13569 1480 aa24.61■■□□□ 1.53
CHL1-203ENST00000421198 CUX2O14529 1486 aa24.55■■□□□ 1.52
CHL1-203ENST00000421198 KIF21AQ7Z4S6 1674 aa24.54■■□□□ 1.52
CHL1-203ENST00000421198 SUPT5HO00267 1087 aaKnown RBP24.49■■□□□ 1.51
CHL1-203ENST00000421198 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
CHL1-203ENST00000421198 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.51
CHL1-203ENST00000421198 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
CHL1-203ENST00000421198 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.5
CHL1-203ENST00000421198 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
CHL1-203ENST00000421198 WDR62O43379 1518 aa24.31■■□□□ 1.48
CHL1-203ENST00000421198 URB2Q14146 1524 aaKnown RBP24.21■■□□□ 1.47
CHL1-203ENST00000421198 ABCC8Q09428 1581 aa24.08■■□□□ 1.45
CHL1-203ENST00000421198 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
CHL1-203ENST00000421198 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.44
CHL1-203ENST00000421198 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
CHL1-203ENST00000421198 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
CHL1-203ENST00000421198 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
CHL1-203ENST00000421198 CUX1P39880 1505 aa23.86■■□□□ 1.41
CHL1-203ENST00000421198 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
CHL1-203ENST00000421198 ZNF608Q9ULD9 1512 aaPredicted RBP23.81■■□□□ 1.4
CHL1-203ENST00000421198 TARBP1Q13395 1621 aaKnown RBP23.79■■□□□ 1.4
CHL1-203ENST00000421198 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
CHL1-203ENST00000421198 SOGA1O94964 1423 aa23.78■■□□□ 1.4
CHL1-203ENST00000421198 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
CHL1-203ENST00000421198 WRNQ14191 1432 aaPredicted RBP eCLIP23.72■■□□□ 1.39
CHL1-203ENST00000421198 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
CHL1-203ENST00000421198 EIF4G3O43432 1585 aaKnown RBP23.68■■□□□ 1.38
CHL1-203ENST00000421198 TOP2BQ02880 1626 aa23.65■■□□□ 1.38
CHL1-203ENST00000421198 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
CHL1-203ENST00000421198 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
CHL1-203ENST00000421198 SYNJ1O43426 1573 aa23.62■■□□□ 1.37
CHL1-203ENST00000421198 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
CHL1-203ENST00000421198 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
CHL1-203ENST00000421198 ABCA10Q8WWZ4 1543 aa23.57■■□□□ 1.36
CHL1-203ENST00000421198 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
CHL1-203ENST00000421198 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
CHL1-203ENST00000421198 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
CHL1-203ENST00000421198 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
CHL1-203ENST00000421198 MAGI1Q96QZ7 1491 aaPredicted RBP23.43■■□□□ 1.34
CHL1-203ENST00000421198 FBLN2P98095 1184 aa23.42■■□□□ 1.34
CHL1-203ENST00000421198 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
CHL1-203ENST00000421198 CHD1O14646 1710 aa23.38■■□□□ 1.33
CHL1-203ENST00000421198 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
CHL1-203ENST00000421198 SYNJ2O15056 1496 aa23.35■■□□□ 1.33
CHL1-203ENST00000421198 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
CHL1-203ENST00000421198 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
CHL1-203ENST00000421198 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
CHL1-203ENST00000421198 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
CHL1-203ENST00000421198 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
CHL1-203ENST00000421198 IGF1RP08069 1367 aa23.17■■□□□ 1.3
CHL1-203ENST00000421198 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
CHL1-203ENST00000421198 CLASP1Q7Z460 1538 aa23.16■■□□□ 1.3
CHL1-203ENST00000421198 ARHGEF11O15085 1522 aa23.13■■□□□ 1.29
CHL1-203ENST00000421198 RIMBP3CA6NJZ7 1639 aa23.12■■□□□ 1.29
CHL1-203ENST00000421198 RIMBP3BA6NNM3 1639 aa23.12■■□□□ 1.29
CHL1-203ENST00000421198 RIMBP3Q9UFD9 1639 aa23.12■■□□□ 1.29
CHL1-203ENST00000421198 NUP160Q12769 1436 aa23.1■■□□□ 1.29
CHL1-203ENST00000421198 CEP170Q5SW79 1584 aa23.05■■□□□ 1.28
CHL1-203ENST00000421198 CUL7Q14999 1698 aa23.04■■□□□ 1.28
CHL1-203ENST00000421198 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
CHL1-203ENST00000421198 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
CHL1-203ENST00000421198 CYB5RLQ6IPT4 315 aa22.97■■□□□ 1.27
CHL1-203ENST00000421198 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms