RNA–Protein interactions for RNA: ENST00000421048.3

RPSAP59-201, Transcript of ribosomal protein SA pseudogene 59, humanhuman

BASIC

Gene RPSAP59, Length 890 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP59-201ENST00000421048 NISCHQ9Y2I1 1504 aa20.27■□□□□ 0.84
RPSAP59-201ENST00000421048 ABCC9O60706 1549 aa18.49■□□□□ 0.55
RPSAP59-201ENST00000421048 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
RPSAP59-201ENST00000421048 DNAJC5BQ9UF47 199 aa17.69■□□□□ 0.42
RPSAP59-201ENST00000421048 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
RPSAP59-201ENST00000421048 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
RPSAP59-201ENST00000421048 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
RPSAP59-201ENST00000421048 NACADO15069 1562 aa17.23■□□□□ 0.35
RPSAP59-201ENST00000421048 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
RPSAP59-201ENST00000421048 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
RPSAP59-201ENST00000421048 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
RPSAP59-201ENST00000421048 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
RPSAP59-201ENST00000421048 DCAF1Q9Y4B6 1507 aa16.68■□□□□ 0.26
RPSAP59-201ENST00000421048 CECR2Q9BXF3 1484 aa16.64■□□□□ 0.25
RPSAP59-201ENST00000421048 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
RPSAP59-201ENST00000421048 SCRIBQ14160 1630 aa16.6■□□□□ 0.25
RPSAP59-201ENST00000421048 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
RPSAP59-201ENST00000421048 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
RPSAP59-201ENST00000421048 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
RPSAP59-201ENST00000421048 NCAPD3P42695 1498 aa16.01■□□□□ 0.15
RPSAP59-201ENST00000421048 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
RPSAP59-201ENST00000421048 CUX2O14529 1486 aa15.91■□□□□ 0.14
RPSAP59-201ENST00000421048 ERCC6Q03468 1493 aa15.88■□□□□ 0.13
RPSAP59-201ENST00000421048 NESP48681 1621 aa15.86■□□□□ 0.13
RPSAP59-201ENST00000421048 SMARCA4P51532 1647 aa15.8■□□□□ 0.12
RPSAP59-201ENST00000421048 SMARCA2P51531 1590 aa15.78■□□□□ 0.12
RPSAP59-201ENST00000421048 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
RPSAP59-201ENST00000421048 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.1
RPSAP59-201ENST00000421048 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
RPSAP59-201ENST00000421048 BAZ1AQ9NRL2 1556 aaPredicted RBP15.67■□□□□ 0.1
RPSAP59-201ENST00000421048 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
RPSAP59-201ENST00000421048 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
RPSAP59-201ENST00000421048 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
RPSAP59-201ENST00000421048 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
RPSAP59-201ENST00000421048 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.08
RPSAP59-201ENST00000421048 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
RPSAP59-201ENST00000421048 TRIM41Q8WV44 630 aa15.44■□□□□ 0.06
RPSAP59-201ENST00000421048 WIZO95785 1651 aa15.41■□□□□ 0.06
RPSAP59-201ENST00000421048 MRC2Q9UBG0 1479 aa15.41■□□□□ 0.06
RPSAP59-201ENST00000421048 WDR62O43379 1518 aa15.38■□□□□ 0.05
RPSAP59-201ENST00000421048 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
RPSAP59-201ENST00000421048 RSF1Q96T23 1441 aaPredicted RBP15.3■□□□□ 0.04
RPSAP59-201ENST00000421048 CFTRP13569 1480 aa15.29■□□□□ 0.04
RPSAP59-201ENST00000421048 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
RPSAP59-201ENST00000421048 URB2Q14146 1524 aaKnown RBP15.24■□□□□ 0.03
RPSAP59-201ENST00000421048 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
RPSAP59-201ENST00000421048 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
RPSAP59-201ENST00000421048 ZNF608Q9ULD9 1512 aaPredicted RBP15.12■□□□□ 0.01
RPSAP59-201ENST00000421048 CCDC88BA6NC98 1476 aa15.09■□□□□ 0.01
RPSAP59-201ENST00000421048 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
RPSAP59-201ENST00000421048 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
RPSAP59-201ENST00000421048 RIMBP3CA6NJZ7 1639 aa14.99□□□□□ -0.01
RPSAP59-201ENST00000421048 RIMBP3BA6NNM3 1639 aa14.99□□□□□ -0.01
RPSAP59-201ENST00000421048 RIMBP3Q9UFD9 1639 aa14.99□□□□□ -0.01
RPSAP59-201ENST00000421048 ARHGEF11O15085 1522 aa14.96□□□□□ -0.02
RPSAP59-201ENST00000421048 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
RPSAP59-201ENST00000421048 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
RPSAP59-201ENST00000421048 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
RPSAP59-201ENST00000421048 EIF4G3O43432 1585 aaKnown RBP14.89□□□□□ -0.03
RPSAP59-201ENST00000421048 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
RPSAP59-201ENST00000421048 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
RPSAP59-201ENST00000421048 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
RPSAP59-201ENST00000421048 FBLN2P98095 1184 aa14.86□□□□□ -0.03
RPSAP59-201ENST00000421048 RAD54L2Q9Y4B4 1467 aa14.86□□□□□ -0.03
RPSAP59-201ENST00000421048 POLA1P09884 1462 aaPredicted RBP14.85□□□□□ -0.03
RPSAP59-201ENST00000421048 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
RPSAP59-201ENST00000421048 ARAP1Q96P48 1450 aa14.84□□□□□ -0.03
RPSAP59-201ENST00000421048 SOGA1O94964 1423 aa14.79□□□□□ -0.04
RPSAP59-201ENST00000421048 CHD1O14646 1710 aa14.78□□□□□ -0.04
RPSAP59-201ENST00000421048 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
RPSAP59-201ENST00000421048 SNAPC4Q5SXM2 1469 aa14.73□□□□□ -0.05
RPSAP59-201ENST00000421048 FGD5Q6ZNL6 1462 aa14.72□□□□□ -0.05
RPSAP59-201ENST00000421048 CUX1P39880 1505 aa14.71□□□□□ -0.05
RPSAP59-201ENST00000421048 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
RPSAP59-201ENST00000421048 CLASP1Q7Z460 1538 aa14.68□□□□□ -0.06
RPSAP59-201ENST00000421048 GRIN2BQ13224 1484 aa14.63□□□□□ -0.07
RPSAP59-201ENST00000421048 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
RPSAP59-201ENST00000421048 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
RPSAP59-201ENST00000421048 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
RPSAP59-201ENST00000421048 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
RPSAP59-201ENST00000421048 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
RPSAP59-201ENST00000421048 ERCC6L2Q5T890 1561 aa14.53□□□□□ -0.08
RPSAP59-201ENST00000421048 ABCA10Q8WWZ4 1543 aa14.53□□□□□ -0.08
RPSAP59-201ENST00000421048 SUPT5HO00267 1087 aaKnown RBP14.51□□□□□ -0.09
RPSAP59-201ENST00000421048 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
RPSAP59-201ENST00000421048 PBRM1Q86U86 1689 aa14.47□□□□□ -0.09
RPSAP59-201ENST00000421048 GRIN2AQ12879 1464 aa14.46□□□□□ -0.09
RPSAP59-201ENST00000421048 NUP160Q12769 1436 aa14.45□□□□□ -0.1
RPSAP59-201ENST00000421048 WRNQ14191 1432 aaPredicted RBP eCLIP14.43□□□□□ -0.1
RPSAP59-201ENST00000421048 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
RPSAP59-201ENST00000421048 AEBP2Q6ZN18 517 aaPredicted RBP14.41□□□□□ -0.1
RPSAP59-201ENST00000421048 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
RPSAP59-201ENST00000421048 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
RPSAP59-201ENST00000421048 TOP2BQ02880 1626 aa14.35□□□□□ -0.11
RPSAP59-201ENST00000421048 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
RPSAP59-201ENST00000421048 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
RPSAP59-201ENST00000421048 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.11
RPSAP59-201ENST00000421048 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
RPSAP59-201ENST00000421048 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
RPSAP59-201ENST00000421048 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms