RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
ITSN1-215ENST00000420666 ABCC9O60706 1549 aa33.15■■■□□ 2.9
ITSN1-215ENST00000420666 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
ITSN1-215ENST00000420666 RB1CC1Q8TDY2 1594 aa31.5■■■□□ 2.63
ITSN1-215ENST00000420666 NACADO15069 1562 aa31.3■■■□□ 2.6
ITSN1-215ENST00000420666 DNAJC5BQ9UF47 199 aa31.23■■■□□ 2.59
ITSN1-215ENST00000420666 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
ITSN1-215ENST00000420666 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
ITSN1-215ENST00000420666 MYO15BQ96JP2 1530 aa30.89■■■□□ 2.54
ITSN1-215ENST00000420666 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
ITSN1-215ENST00000420666 BICRAQ9NZM4 1560 aa30.57■■■□□ 2.48
ITSN1-215ENST00000420666 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
ITSN1-215ENST00000420666 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
ITSN1-215ENST00000420666 SHROOM4Q9ULL8 1493 aa30.21■■■□□ 2.43
ITSN1-215ENST00000420666 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
ITSN1-215ENST00000420666 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
ITSN1-215ENST00000420666 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.37
ITSN1-215ENST00000420666 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
ITSN1-215ENST00000420666 NCAPD3P42695 1498 aa28.96■■■□□ 2.23
ITSN1-215ENST00000420666 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
ITSN1-215ENST00000420666 DNAJC5Q9H3Z4 198 aa28.75■■■□□ 2.19
ITSN1-215ENST00000420666 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
ITSN1-215ENST00000420666 SMARCA4P51532 1647 aa28.69■■■□□ 2.18
ITSN1-215ENST00000420666 HMGXB3Q12766 1538 aa28.65■■■□□ 2.18
ITSN1-215ENST00000420666 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
ITSN1-215ENST00000420666 CUX2O14529 1486 aa28.61■■■□□ 2.17
ITSN1-215ENST00000420666 BAZ1AQ9NRL2 1556 aaPredicted RBP28.6■■■□□ 2.17
ITSN1-215ENST00000420666 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
ITSN1-215ENST00000420666 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.15
ITSN1-215ENST00000420666 NESP48681 1621 aa28.44■■■□□ 2.14
ITSN1-215ENST00000420666 MROH2BQ7Z745 1585 aa28.39■■■□□ 2.14
ITSN1-215ENST00000420666 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
ITSN1-215ENST00000420666 PDS5BQ9NTI5 1447 aa28.16■■■□□ 2.1
ITSN1-215ENST00000420666 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
ITSN1-215ENST00000420666 CADPSQ9ULU8 1353 aa28.1■■■□□ 2.09
ITSN1-215ENST00000420666 WIZO95785 1651 aa27.97■■■□□ 2.07
ITSN1-215ENST00000420666 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
ITSN1-215ENST00000420666 MRC2Q9UBG0 1479 aa27.86■■■□□ 2.05
ITSN1-215ENST00000420666 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
ITSN1-215ENST00000420666 WDR62O43379 1518 aa27.77■■■□□ 2.04
ITSN1-215ENST00000420666 CFTRP13569 1480 aa27.73■■■□□ 2.03
ITSN1-215ENST00000420666 CEP164Q9UPV0 1460 aa27.73■■■□□ 2.03
ITSN1-215ENST00000420666 FANCD2Q9BXW9 1451 aa27.71■■■□□ 2.03
ITSN1-215ENST00000420666 TOP2AP11388 1531 aaKnown RBP27.67■■■□□ 2.02
ITSN1-215ENST00000420666 URB2Q14146 1524 aaKnown RBP27.47■■□□□ 1.99
ITSN1-215ENST00000420666 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
ITSN1-215ENST00000420666 CCDC88BA6NC98 1476 aa27.4■■□□□ 1.98
ITSN1-215ENST00000420666 OSCARQ8IYS5 282 aa27.39■■□□□ 1.98
ITSN1-215ENST00000420666 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
ITSN1-215ENST00000420666 PRDM2Q13029 1718 aa27.2■■□□□ 1.94
ITSN1-215ENST00000420666 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
ITSN1-215ENST00000420666 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
ITSN1-215ENST00000420666 ZNF608Q9ULD9 1512 aaPredicted RBP27.15■■□□□ 1.94
ITSN1-215ENST00000420666 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
ITSN1-215ENST00000420666 AQRO60306 1485 aaKnown RBP eCLIP26.93■■□□□ 1.9
ITSN1-215ENST00000420666 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
ITSN1-215ENST00000420666 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
ITSN1-215ENST00000420666 TARBP1Q13395 1621 aaKnown RBP26.88■■□□□ 1.89
ITSN1-215ENST00000420666 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
ITSN1-215ENST00000420666 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
ITSN1-215ENST00000420666 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
ITSN1-215ENST00000420666 ARHGEF11O15085 1522 aa26.83■■□□□ 1.89
ITSN1-215ENST00000420666 SOGA1O94964 1423 aa26.82■■□□□ 1.88
ITSN1-215ENST00000420666 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
ITSN1-215ENST00000420666 FBLN2P98095 1184 aa26.8■■□□□ 1.88
ITSN1-215ENST00000420666 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
ITSN1-215ENST00000420666 CYB5RLQ6IPT4 315 aa26.73■■□□□ 1.87
ITSN1-215ENST00000420666 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
ITSN1-215ENST00000420666 CUX1P39880 1505 aa26.66■■□□□ 1.86
ITSN1-215ENST00000420666 CHD1O14646 1710 aa26.66■■□□□ 1.86
ITSN1-215ENST00000420666 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
ITSN1-215ENST00000420666 CHMP7Q8WUX9 453 aaPredicted RBP26.62■■□□□ 1.85
ITSN1-215ENST00000420666 SNAPC4Q5SXM2 1469 aa26.62■■□□□ 1.85
ITSN1-215ENST00000420666 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
ITSN1-215ENST00000420666 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
ITSN1-215ENST00000420666 ARAP1Q96P48 1450 aa26.57■■□□□ 1.84
ITSN1-215ENST00000420666 MAGI1Q96QZ7 1491 aaPredicted RBP26.56■■□□□ 1.84
ITSN1-215ENST00000420666 SYNJ2O15056 1496 aa26.48■■□□□ 1.83
ITSN1-215ENST00000420666 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
ITSN1-215ENST00000420666 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
ITSN1-215ENST00000420666 SYNJ1O43426 1573 aa26.45■■□□□ 1.82
ITSN1-215ENST00000420666 TRHP20396 242 aaPredicted RBP26.44■■□□□ 1.82
ITSN1-215ENST00000420666 ABCA10Q8WWZ4 1543 aa26.43■■□□□ 1.82
ITSN1-215ENST00000420666 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
ITSN1-215ENST00000420666 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
ITSN1-215ENST00000420666 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
ITSN1-215ENST00000420666 GRIN2AQ12879 1464 aa26.2■■□□□ 1.78
ITSN1-215ENST00000420666 TOP2BQ02880 1626 aa26.2■■□□□ 1.78
ITSN1-215ENST00000420666 FHAD1B1AJZ9 1412 aa26.15■■□□□ 1.78
ITSN1-215ENST00000420666 NUP160Q12769 1436 aa26.15■■□□□ 1.78
ITSN1-215ENST00000420666 BIVM-ERCC5R4GMW8 1640 aa26.15■■□□□ 1.78
ITSN1-215ENST00000420666 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
ITSN1-215ENST00000420666 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
ITSN1-215ENST00000420666 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
ITSN1-215ENST00000420666 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
ITSN1-215ENST00000420666 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
ITSN1-215ENST00000420666 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
ITSN1-215ENST00000420666 PRG4Q92954 1404 aaPredicted RBP25.9■■□□□ 1.74
ITSN1-215ENST00000420666 IGF1RP08069 1367 aa25.82■■□□□ 1.72
ITSN1-215ENST00000420666 KIF27Q86VH2 1401 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms