RNA–Protein interactions for RNA: ENST00000420591.1

SNED1-206, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 3

Gene SNED1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-206ENST00000420591 NISCHQ9Y2I1 1504 aa49.03■■■■■ 5.44
SNED1-206ENST00000420591 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
SNED1-206ENST00000420591 ABCC9O60706 1549 aa43.65■■■■■ 4.58
SNED1-206ENST00000420591 RB1CC1Q8TDY2 1594 aa41.66■■■■■ 4.26
SNED1-206ENST00000420591 DCAF8L2P0C7V8 631 aa41.48■■■■■ 4.23
SNED1-206ENST00000420591 NACADO15069 1562 aa41.43■■■■■ 4.22
SNED1-206ENST00000420591 MYO15BQ96JP2 1530 aa40.93■■■■■ 4.14
SNED1-206ENST00000420591 PABPN1Q86U42 306 aaKnown RBP eCLIP40.73■■■■■ 4.11
SNED1-206ENST00000420591 ZCCHC6Q5VYS8 1495 aaKnown RBP40.67■■■■■ 4.1
SNED1-206ENST00000420591 DNAJC5BQ9UF47 199 aa40.64■■■■■ 4.1
SNED1-206ENST00000420591 UNC13AQ9UPW8 1703 aa40.52■■■■■ 4.08
SNED1-206ENST00000420591 DCAF1Q9Y4B6 1507 aa40.5■■■■■ 4.07
SNED1-206ENST00000420591 BICRAQ9NZM4 1560 aa40.31■■■■■ 4.04
SNED1-206ENST00000420591 SCRIBQ14160 1630 aa39.99■■■■□ 3.99
SNED1-206ENST00000420591 SHROOM4Q9ULL8 1493 aa39.91■■■■□ 3.98
SNED1-206ENST00000420591 CC2D2AQ9P2K1 1620 aa39.38■■■■□ 3.89
SNED1-206ENST00000420591 EIF4G1Q04637 1599 aaKnown RBP39.38■■■■□ 3.89
SNED1-206ENST00000420591 CECR2Q9BXF3 1484 aa39.3■■■■□ 3.88
SNED1-206ENST00000420591 NCAPD3P42695 1498 aa38.25■■■■□ 3.71
SNED1-206ENST00000420591 ATAD2BQ9ULI0 1458 aa38.17■■■■□ 3.7
SNED1-206ENST00000420591 SMARCA4P51532 1647 aa38.16■■■■□ 3.7
SNED1-206ENST00000420591 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
SNED1-206ENST00000420591 BAZ1AQ9NRL2 1556 aaPredicted RBP38.06■■■■□ 3.68
SNED1-206ENST00000420591 HMGXB3Q12766 1538 aa37.96■■■■□ 3.67
SNED1-206ENST00000420591 BAZ1BQ9UIG0 1483 aaKnown RBP37.86■■■■□ 3.65
SNED1-206ENST00000420591 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.64
SNED1-206ENST00000420591 PEG3Q9GZU2 1588 aa37.76■■■■□ 3.63
SNED1-206ENST00000420591 ERCC6Q03468 1493 aa37.74■■■■□ 3.63
SNED1-206ENST00000420591 NESP48681 1621 aa37.52■■■■□ 3.6
SNED1-206ENST00000420591 CUX2O14529 1486 aa37.51■■■■□ 3.59
SNED1-206ENST00000420591 LAMC3Q9Y6N6 1575 aa37.34■■■■□ 3.57
SNED1-206ENST00000420591 WIZO95785 1651 aa37.29■■■■□ 3.56
SNED1-206ENST00000420591 PDS5BQ9NTI5 1447 aa37.2■■■■□ 3.55
SNED1-206ENST00000420591 DNAJC5Q9H3Z4 198 aa37.19■■■■□ 3.54
SNED1-206ENST00000420591 CADPSQ9ULU8 1353 aa37.15■■■■□ 3.54
SNED1-206ENST00000420591 RSF1Q96T23 1441 aaPredicted RBP37.12■■■■□ 3.53
SNED1-206ENST00000420591 THOC2Q8NI27 1593 aaKnown RBP37.03■■■■□ 3.52
SNED1-206ENST00000420591 KIF21AQ7Z4S6 1674 aa36.98■■■■□ 3.51
SNED1-206ENST00000420591 TOP2AP11388 1531 aaKnown RBP36.89■■■■□ 3.5
SNED1-206ENST00000420591 MRC2Q9UBG0 1479 aa36.8■■■■□ 3.48
SNED1-206ENST00000420591 CFTRP13569 1480 aa36.74■■■■□ 3.47
SNED1-206ENST00000420591 CEP164Q9UPV0 1460 aa36.74■■■■□ 3.47
SNED1-206ENST00000420591 FANCD2Q9BXW9 1451 aa36.71■■■■□ 3.47
SNED1-206ENST00000420591 WDR62O43379 1518 aa36.64■■■■□ 3.46
SNED1-206ENST00000420591 CCDC88BA6NC98 1476 aa36.5■■■■□ 3.43
SNED1-206ENST00000420591 URB2Q14146 1524 aaKnown RBP36.33■■■■□ 3.41
SNED1-206ENST00000420591 PRDM2Q13029 1718 aa36.26■■■■□ 3.4
SNED1-206ENST00000420591 ABCC8Q09428 1581 aa36.02■■■■□ 3.36
SNED1-206ENST00000420591 TOPBP1Q92547 1522 aa36.01■■■■□ 3.36
SNED1-206ENST00000420591 IFT140Q96RY7 1462 aa35.99■■■■□ 3.35
SNED1-206ENST00000420591 OSCARQ8IYS5 282 aa35.94■■■■□ 3.34
SNED1-206ENST00000420591 DNMBPQ6XZF7 1577 aa35.9■■■■□ 3.34
SNED1-206ENST00000420591 ZNF608Q9ULD9 1512 aaPredicted RBP35.84■■■■□ 3.33
SNED1-206ENST00000420591 SUPT5HO00267 1087 aaKnown RBP35.84■■■■□ 3.33
SNED1-206ENST00000420591 TRIM41Q8WV44 630 aa35.77■■■■□ 3.32
SNED1-206ENST00000420591 POLA1P09884 1462 aaPredicted RBP35.66■■■■□ 3.3
SNED1-206ENST00000420591 EIF4G3O43432 1585 aaKnown RBP35.64■■■■□ 3.3
SNED1-206ENST00000420591 TARBP1Q13395 1621 aaKnown RBP35.61■■■■□ 3.29
SNED1-206ENST00000420591 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.29
SNED1-206ENST00000420591 SOGA1O94964 1423 aa35.57■■■■□ 3.29
SNED1-206ENST00000420591 RAD54L2Q9Y4B4 1467 aa35.54■■■■□ 3.28
SNED1-206ENST00000420591 FGD5Q6ZNL6 1462 aa35.49■■■■□ 3.27
SNED1-206ENST00000420591 CUX1P39880 1505 aa35.47■■■■□ 3.27
SNED1-206ENST00000420591 TDRD9Q8NDG6 1382 aaKnown RBP35.46■■■■□ 3.27
SNED1-206ENST00000420591 FBLN2P98095 1184 aa35.45■■■■□ 3.27
SNED1-206ENST00000420591 WDR97A6NE52 1622 aa35.32■■■■□ 3.24
SNED1-206ENST00000420591 CHD1O14646 1710 aa35.28■■■■□ 3.24
SNED1-206ENST00000420591 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
SNED1-206ENST00000420591 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
SNED1-206ENST00000420591 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
SNED1-206ENST00000420591 SNAPC4Q5SXM2 1469 aa35.24■■■■□ 3.23
SNED1-206ENST00000420591 ARHGEF11O15085 1522 aa35.24■■■■□ 3.23
SNED1-206ENST00000420591 CHMP7Q8WUX9 453 aaPredicted RBP35.22■■■■□ 3.23
SNED1-206ENST00000420591 GRIN2BQ13224 1484 aa35.22■■■■□ 3.23
SNED1-206ENST00000420591 MAGI1Q96QZ7 1491 aaPredicted RBP35.17■■■■□ 3.22
SNED1-206ENST00000420591 GAPVD1Q14C86 1478 aa35.13■■■■□ 3.21
SNED1-206ENST00000420591 ABCA10Q8WWZ4 1543 aa35.11■■■■□ 3.21
SNED1-206ENST00000420591 WRNQ14191 1432 aaPredicted RBP eCLIP35.09■■■■□ 3.21
SNED1-206ENST00000420591 CYB5RLQ6IPT4 315 aa35.08■■■■□ 3.21
SNED1-206ENST00000420591 SYNJ2O15056 1496 aa35.05■■■■□ 3.2
SNED1-206ENST00000420591 SYNJ1O43426 1573 aa35■■■■□ 3.19
SNED1-206ENST00000420591 TOP2BQ02880 1626 aa34.98■■■■□ 3.19
SNED1-206ENST00000420591 PBRM1Q86U86 1689 aa34.98■■■■□ 3.19
SNED1-206ENST00000420591 ABCA5Q8WWZ7 1642 aa34.95■■■■□ 3.19
SNED1-206ENST00000420591 BIVM-ERCC5R4GMW8 1640 aa34.94■■■■□ 3.18
SNED1-206ENST00000420591 CLASP1Q7Z460 1538 aa34.91■■■■□ 3.18
SNED1-206ENST00000420591 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
SNED1-206ENST00000420591 GRIN2AQ12879 1464 aa34.73■■■■□ 3.15
SNED1-206ENST00000420591 FHAD1B1AJZ9 1412 aa34.71■■■■□ 3.15
SNED1-206ENST00000420591 ADAMTS12P58397 1594 aa34.7■■■■□ 3.14
SNED1-206ENST00000420591 ERICH3Q5RHP9 1530 aa34.67■■■■□ 3.14
SNED1-206ENST00000420591 TRHP20396 242 aaPredicted RBP34.66■■■■□ 3.14
SNED1-206ENST00000420591 NUP160Q12769 1436 aa34.58■■■■□ 3.13
SNED1-206ENST00000420591 CEP170Q5SW79 1584 aa34.53■■■■□ 3.12
SNED1-206ENST00000420591 KIF27Q86VH2 1401 aa34.42■■■■□ 3.1
SNED1-206ENST00000420591 ERCC6L2Q5T890 1561 aa34.37■■■■□ 3.09
SNED1-206ENST00000420591 JPH4Q96JJ6 628 aa34.34■■■■□ 3.09
SNED1-206ENST00000420591 IGF1RP08069 1367 aa34.33■■■■□ 3.09
SNED1-206ENST00000420591 SHROOM2Q13796 1616 aa34.32■■■■□ 3.08
SNED1-206ENST00000420591 PRG4Q92954 1404 aaPredicted RBP34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms