RNA–Protein interactions for RNA: ENST00000420535.1

LOXL3-207, Transcript of lysyl oxidase like 3, humanhuman

TSL 2

Gene LOXL3, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-207ENST00000420535 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
LOXL3-207ENST00000420535 CCDC180Q9P1Z9 1646 aa33.63■■■□□ 2.97
LOXL3-207ENST00000420535 ABCC9O60706 1549 aa32.37■■■□□ 2.77
LOXL3-207ENST00000420535 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
LOXL3-207ENST00000420535 NACADO15069 1562 aa31.39■■■□□ 2.62
LOXL3-207ENST00000420535 DCAF1Q9Y4B6 1507 aa31.38■■■□□ 2.61
LOXL3-207ENST00000420535 MYO15BQ96JP2 1530 aa31.36■■■□□ 2.61
LOXL3-207ENST00000420535 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
LOXL3-207ENST00000420535 DCAF8L2P0C7V8 631 aa31.08■■■□□ 2.57
LOXL3-207ENST00000420535 UNC13AQ9UPW8 1703 aa30.93■■■□□ 2.54
LOXL3-207ENST00000420535 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
LOXL3-207ENST00000420535 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
LOXL3-207ENST00000420535 PABPN1Q86U42 306 aaKnown RBP eCLIP30.2■■■□□ 2.43
LOXL3-207ENST00000420535 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
LOXL3-207ENST00000420535 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
LOXL3-207ENST00000420535 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
LOXL3-207ENST00000420535 CC2D2AQ9P2K1 1620 aa29.41■■■□□ 2.3
LOXL3-207ENST00000420535 DNAJC5BQ9UF47 199 aa29.39■■■□□ 2.3
LOXL3-207ENST00000420535 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
LOXL3-207ENST00000420535 BAZ1AQ9NRL2 1556 aaPredicted RBP29.3■■■□□ 2.28
LOXL3-207ENST00000420535 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
LOXL3-207ENST00000420535 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
LOXL3-207ENST00000420535 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
LOXL3-207ENST00000420535 SMARCA2P51531 1590 aa29■■■□□ 2.23
LOXL3-207ENST00000420535 WIZO95785 1651 aa28.98■■■□□ 2.23
LOXL3-207ENST00000420535 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
LOXL3-207ENST00000420535 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
LOXL3-207ENST00000420535 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
LOXL3-207ENST00000420535 BAZ1BQ9UIG0 1483 aaKnown RBP28.77■■■□□ 2.2
LOXL3-207ENST00000420535 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.18
LOXL3-207ENST00000420535 CCDC88BA6NC98 1476 aa28.23■■■□□ 2.11
LOXL3-207ENST00000420535 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
LOXL3-207ENST00000420535 NESP48681 1621 aa28.21■■■□□ 2.11
LOXL3-207ENST00000420535 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
LOXL3-207ENST00000420535 PRDM2Q13029 1718 aa28.1■■■□□ 2.09
LOXL3-207ENST00000420535 CFTRP13569 1480 aa28.04■■■□□ 2.08
LOXL3-207ENST00000420535 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
LOXL3-207ENST00000420535 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
LOXL3-207ENST00000420535 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
LOXL3-207ENST00000420535 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
LOXL3-207ENST00000420535 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
LOXL3-207ENST00000420535 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
LOXL3-207ENST00000420535 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
LOXL3-207ENST00000420535 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
LOXL3-207ENST00000420535 WDR62O43379 1518 aa27.62■■■□□ 2.01
LOXL3-207ENST00000420535 URB2Q14146 1524 aaKnown RBP27.57■■■□□ 2
LOXL3-207ENST00000420535 CUX2O14529 1486 aa27.45■■□□□ 1.99
LOXL3-207ENST00000420535 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
LOXL3-207ENST00000420535 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
LOXL3-207ENST00000420535 CUX1P39880 1505 aa27.41■■□□□ 1.98
LOXL3-207ENST00000420535 ABCC8Q09428 1581 aa27.39■■□□□ 1.98
LOXL3-207ENST00000420535 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
LOXL3-207ENST00000420535 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
LOXL3-207ENST00000420535 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
LOXL3-207ENST00000420535 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
LOXL3-207ENST00000420535 WRNQ14191 1432 aaPredicted RBP eCLIP27.23■■□□□ 1.95
LOXL3-207ENST00000420535 TARBP1Q13395 1621 aaKnown RBP27.2■■□□□ 1.95
LOXL3-207ENST00000420535 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
LOXL3-207ENST00000420535 WDR97A6NE52 1622 aa27.18■■□□□ 1.94
LOXL3-207ENST00000420535 IFT140Q96RY7 1462 aa27.09■■□□□ 1.93
LOXL3-207ENST00000420535 RAD54L2Q9Y4B4 1467 aa27.07■■□□□ 1.92
LOXL3-207ENST00000420535 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
LOXL3-207ENST00000420535 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.92
LOXL3-207ENST00000420535 SOGA1O94964 1423 aa26.97■■□□□ 1.91
LOXL3-207ENST00000420535 ABCA10Q8WWZ4 1543 aa26.95■■□□□ 1.91
LOXL3-207ENST00000420535 ABCA5Q8WWZ7 1642 aa26.94■■□□□ 1.9
LOXL3-207ENST00000420535 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
LOXL3-207ENST00000420535 AQRO60306 1485 aaKnown RBP eCLIP26.83■■□□□ 1.89
LOXL3-207ENST00000420535 TDRD9Q8NDG6 1382 aaKnown RBP26.79■■□□□ 1.88
LOXL3-207ENST00000420535 GAPVD1Q14C86 1478 aa26.73■■□□□ 1.87
LOXL3-207ENST00000420535 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
LOXL3-207ENST00000420535 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
LOXL3-207ENST00000420535 CHD1O14646 1710 aa26.65■■□□□ 1.86
LOXL3-207ENST00000420535 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
LOXL3-207ENST00000420535 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
LOXL3-207ENST00000420535 ERICH3Q5RHP9 1530 aa26.63■■□□□ 1.85
LOXL3-207ENST00000420535 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
LOXL3-207ENST00000420535 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
LOXL3-207ENST00000420535 MAGI1Q96QZ7 1491 aaPredicted RBP26.6■■□□□ 1.85
LOXL3-207ENST00000420535 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
LOXL3-207ENST00000420535 CUL7Q14999 1698 aa26.5■■□□□ 1.83
LOXL3-207ENST00000420535 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
LOXL3-207ENST00000420535 IGF1RP08069 1367 aa26.46■■□□□ 1.83
LOXL3-207ENST00000420535 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
LOXL3-207ENST00000420535 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
LOXL3-207ENST00000420535 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
LOXL3-207ENST00000420535 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
LOXL3-207ENST00000420535 EEA1Q15075 1411 aa26.3■■□□□ 1.8
LOXL3-207ENST00000420535 NUP160Q12769 1436 aa26.29■■□□□ 1.8
LOXL3-207ENST00000420535 PRXQ9BXM0 1461 aa26.28■■□□□ 1.8
LOXL3-207ENST00000420535 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.79
LOXL3-207ENST00000420535 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
LOXL3-207ENST00000420535 FBLN2P98095 1184 aa26.2■■□□□ 1.78
LOXL3-207ENST00000420535 RAPGEF2Q9Y4G8 1499 aa26.19■■□□□ 1.78
LOXL3-207ENST00000420535 KIF21BO75037 1637 aa26.19■■□□□ 1.78
LOXL3-207ENST00000420535 OSCARQ8IYS5 282 aa26.16■■□□□ 1.78
LOXL3-207ENST00000420535 SHROOM2Q13796 1616 aa26.16■■□□□ 1.78
LOXL3-207ENST00000420535 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
LOXL3-207ENST00000420535 CSRNP3Q8WYN3 585 aa26.12■■□□□ 1.77
LOXL3-207ENST00000420535 FAM9AQ8IZU1 332 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms